Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000950.1 Hibiscus syriacus cultivar Beakdansim tig00001900_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65177

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
367--544
59
3.1
60
81
6
190
41
5
22
31
1.75
3645--3680
12
3.0
12
87
0
54
63
2
0
33
1.08
4937--5169
126
1.8
126
85
1
324
33
24
18
24
1.97
5115--5524
184
2.2
189
88
3
632
34
21
13
31
1.92
9107--9144
2
19.5
2
83
5
51
50
0
0
50
1.00
9142--9188
3
15.7
3
95
0
85
65
2
0
31
1.04
10445--10530
3
28.7
3
78
17
90
62
0
1
36
1.03
10831--11270
113
3.8
112
82
6
467
27
20
13
38
1.90
10951--11285
113
3.0
112
85
4
469
28
19
15
37
1.92
20946--20977
16
2.1
16
88
11
50
31
3
12
53
1.54
21014--21045
15
2.1
15
94
0
55
46
9
18
25
1.79
26563--26632
3
23.0
3
80
13
81
64
1
1
32
1.11
26563--26632
16
4.6
16
79
15
85
64
1
1
32
1.11
26565--26632
14
4.7
15
81
17
81
64
1
1
32
1.11
26674--26706
16
2.1
16
88
11
50
51
0
3
45
1.16
34852--34889
18
2.1
18
90
0
58
21
10
36
31
1.87
39593--39622
2
15.0
2
100
0
60
50
0
0
50
1.00
41946--41994
13
3.8
13
77
0
53
28
18
14
38
1.90
55734--55790
19
3.0
19
73
19
64
17
33
17
31
1.93
64119--64188
36
1.9
36
83
11
90
38
2
7
51
1.44

Tables:   1

The End!