Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009500.1 Hibiscus syriacus cultivar Beakdansim tig00115000_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51618

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2200--2225
2
13.0
2
100
0
52
50
0
0
50
1.00
2222--2261
18
2.2
18
86
8
55
42
2
2
52
1.28
5663--5720
29
1.9
31
86
6
84
55
1
3
39
1.27
6167--6206
18
2.2
18
86
8
55
42
2
2
52
1.28
16143--16204
5
13.2
5
78
10
60
1
16
56
25
1.49
16142--16204
18
3.4
18
82
4
72
1
17
55
25
1.51
17117--17159
2
21.5
2
100
0
86
51
0
0
48
1.00
23112--23144
2
16.0
2
93
6
57
48
0
3
48
1.17
27699--27743
23
2.0
23
81
0
54
37
6
2
53
1.40
32244--32268
2
12.5
2
100
0
50
48
0
0
52
1.00
33589--33657
31
2.3
29
82
9
77
52
1
2
43
1.25
35205--35233
2
14.5
2
100
0
58
48
0
0
51
1.00
36555--36623
31
2.3
29
82
9
77
52
1
2
43
1.25
38170--38196
2
13.5
2
100
0
54
48
0
0
51
1.00
39513--39583
30
2.5
26
77
16
70
50
1
4
43
1.30
39999--40040
18
2.3
19
80
16
52
45
2
2
50
1.27
48758--48782
2
12.5
2
100
0
50
48
0
0
52
1.00
49847--49893
21
2.1
22
84
7
60
40
0
2
57
1.11
50036--50076
21
2.0
20
85
4
55
43
0
7
48
1.30
50066--50137
31
2.5
30
80
10
80
52
2
2
41
1.30

Tables:   1

The End!