Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009509.1 Hibiscus syriacus cultivar Beakdansim tig00115291_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36199

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1125--1166
20
2.0
21
82
13
52
52
0
4
42
1.22
1379--1445
31
2.3
30
80
12
79
50
2
2
43
1.32
1844--1892
2
25.5
2
87
8
75
48
0
2
48
1.12
1848--1917
23
3.0
23
82
10
72
52
0
1
45
1.09
4550--4597
25
1.9
25
83
8
62
47
4
4
43
1.41
11359--11387
2
14.5
2
100
0
58
48
0
0
51
1.00
23903--23967
12
5.4
12
73
14
62
12
13
16
56
1.66
23899--23969
24
3.0
24
77
8
90
15
12
16
54
1.70
25763--25839
37
2.1
37
80
9
86
51
2
3
41
1.34
29474--29512
2
19.5
2
100
0
78
48
0
0
51
1.00
30616--30650
16
2.2
16
89
0
52
42
0
0
57
0.99
30666--30733
23
2.7
26
71
19
63
55
1
2
39
1.24
31320--31358
18
2.2
18
85
0
51
41
2
0
56
1.13
34389--34456
13
5.7
13
78
18
85
16
16
50
17
1.79
34389--34446
23
2.5
23
94
0
107
13
15
51
18
1.76
34391--34433
5
8.0
5
80
14
50
6
16
55
20
1.64
35569--35641
24
3.0
24
87
0
110
20
9
17
52
1.73
35535--35641
48
2.2
48
81
6
119
22
12
15
49
1.78

Tables:   1

The End!