Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009511.1 Hibiscus syriacus cultivar Beakdansim tig00115394_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35011

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2472--2504
11
3.0
11
90
0
57
15
36
39
9
1.79
2890--3077
33
5.6
33
76
13
179
15
31
35
17
1.91
2869--3085
105
2.1
103
95
1
389
16
34
33
16
1.91
3161--3245
33
2.6
33
90
1
127
15
29
35
20
1.93
3332--3412
33
2.5
33
86
4
103
17
30
33
18
1.94
2974--3547
168
3.4
167
94
2
992
16
33
32
17
1.92
11430--11462
11
3.0
11
90
0
57
15
36
39
9
1.79
11848--12035
33
5.6
33
79
10
211
15
31
35
17
1.92
11833--12037
103
2.0
103
98
0
392
16
32
34
17
1.92
11779--12210
136
3.2
136
75
14
485
16
34
33
16
1.91
12120--12202
31
2.6
32
88
5
116
15
28
34
20
1.94
12284--12365
33
2.5
33
88
2
112
17
30
34
18
1.94
20363--20395
11
3.0
11
90
0
57
15
36
39
9
1.79
20783--20972
33
5.6
33
77
12
197
15
31
35
17
1.91
20762--20980
105
2.1
105
97
0
411
15
33
33
16
1.91
20867--21439
166
3.4
167
93
2
983
16
33
32
17
1.92
21055--21138
33
2.6
32
90
3
125
15
29
34
20
1.93
21222--21303
33
2.5
33
88
2
112
17
30
34
18
1.94
29323--29355
11
3.0
11
90
0
57
15
36
39
9
1.79
29742--29932
33
5.6
33
77
11
197
15
31
35
17
1.91
29721--29940
106
2.1
105
96
0
404
15
33
34
16
1.91
29826--30402
169
3.4
169
93
2
1002
16
33
33
16
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30017--30101
33
2.6
33
90
1
127
15
29
35
20
1.93

Tables:   1

The End!