Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01009512.1 Hibiscus syriacus cultivar Beakdansim tig00115573_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 32025
ACGTcount: A:0.23, C:0.26, G:0.30, T:0.22
Found at i:792 original size:33 final size:33
Alignment explanation
Indices: 747--836 Score: 110
Period size: 33 Copynumber: 2.7 Consensus size: 33
737 AGGCCCCCGT
* * *
747 GGTGCGCCTCGGTCACCATCGGTAATCCAAGGCG
1 GGTG-GCCTCGGTCACCATCGGCAAACCAAGACG
* *
781 GGTGGCCTCGGTCACCATCGACAAACCCAGACG
1 GGTGGCCTCGGTCACCATCGGCAAACCAAGACG
*
814 GGT-GTCTCGGTCACCATCGGCAA
1 GGTGGCCTCGGTCACCATCGGCAA
837 CCCCGGCCAT
Statistics
Matches: 49, Mismatches: 7, Indels: 2
0.84 0.12 0.03
Matches are distributed among these distances:
32 18 0.37
33 27 0.55
34 4 0.08
ACGTcount: A:0.20, C:0.33, G:0.30, T:0.17
Consensus pattern (33 bp):
GGTGGCCTCGGTCACCATCGGCAAACCAAGACG
Found at i:984 original size:33 final size:32
Alignment explanation
Indices: 920--1003 Score: 98
Period size: 33 Copynumber: 2.6 Consensus size: 32
910 GTGTGCGTGA
* * ** *
920 GCCTCGGACACCATCGGCAATCCTGGGCGGGT
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGT
952 GGCCTCGGTCACCATCGGCAAACCCAGACGGGT
1 -GCCTCGGTCACCATCGGCAAACCCAGACGGGT
*
985 GTCTC-GTCACCATCGGCAA
1 GCCTCGGTCACCATCGGCAA
1004 CCCCGGCCAT
Statistics
Matches: 45, Mismatches: 6, Indels: 2
0.85 0.11 0.04
Matches are distributed among these distances:
31 14 0.31
32 4 0.09
33 27 0.60
ACGTcount: A:0.19, C:0.36, G:0.30, T:0.15
Consensus pattern (32 bp):
GCCTCGGTCACCATCGGCAAACCCAGACGGGT
Found at i:999 original size:167 final size:168
Alignment explanation
Indices: 618--1190 Score: 937
Period size: 167 Copynumber: 3.4 Consensus size: 168
608 ACGTGTGCGT
**
618 GCCTCGGTCACCATCGGCAAAAACAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
*
683 GTGCGGGAGTGCCGCACAGAACCGAGCGTTGGTGCGGGAGCCTCGTTCACCATCAGGCCCCC-GT
66 GTGCGGGAGTGCCGCACAG-ACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCCTGT
* *
747 G-GTGCGCCTCGGTCACCATCGGTAATCCAAGGCGGGTG
130 GCGTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTG
*
785 GCCTCGGTCACCATCGACAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCC-GGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
*
849 GTGCGGGAGTGCCGCACAGTACCGA-CTTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCCGTG
66 GTGCGGGAGTGCCGCACAG-ACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCC-TG
* **
913 TGCGTGAGCCTCGGACACCATCGGCAATCCTGGGCGGGTG
129 TGCGTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTG
953 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTC-GTCACCATCGGCAACCCC-GGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
* *
1016 GTGCGGGAGTGCCGCACAGACCGAGCGTTGGTGCGGGAGTCTCGGTCACCATCAGGCCCCTTGTG
66 GTGCGGGAGTGCCGCACAGACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCCTGTG
*
1081 CGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTG
131 CGTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTG
*
1119 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGTC-ACCCCGGGCC-TTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
1182 GTGCGGGAG
66 GTGCGGGAG
1191 CCTCGTCACC
Statistics
Matches: 381, Mismatches: 19, Indels: 13
0.92 0.05 0.03
Matches are distributed among these distances:
165 34 0.09
166 130 0.34
167 149 0.39
168 68 0.18
ACGTcount: A:0.17, C:0.34, G:0.32, T:0.17
Consensus pattern (168 bp):
GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
GTGCGGGAGTGCCGCACAGACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCCTGTG
CGTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTG
Found at i:1092 original size:32 final size:32
Alignment explanation
Indices: 1046--1235 Score: 106
Period size: 32 Copynumber: 5.7 Consensus size: 32
1036 CCGAGCGTTG
*
1046 GTGCGGGAGTCTCGGTCACCATCAGGCCCCTT
1 GTGCGGGAGCCTCGGTCACCATCAGGCCCCTT
* *
1078 GTGCGTGAGCCTCGGTCACCATC-GGCAATCCC-A
1 GTGCGGGAGCCTCGGTCACCATCAGGC---CCCTT
* *
1111 G-GCGGGTGGCCTCGGTCACCATC-GGCAAACCC-A
1 GTGCGGG-AGCCTCGGTCACCATCAGGC---CCCTT
* * * **
1144 G-ACGGGTGTCTCGGTCACCATCGTCACCCCGGGCCTT
1 GTGCGGGAGCCTCGGTCACCA---TCAGGCC---CCTT
1181 GGTGCGGGAGCCTC-GTCACCATCAGGCCCCTT
1 -GTGCGGGAGCCTCGGTCACCATCAGGCCCCTT
*
1213 GTGCGTGAGCCTCGGTCACCATC
1 GTGCGGGAGCCTCGGTCACCATC
1236 GGCAGTCCCA
Statistics
Matches: 125, Mismatches: 18, Indels: 30
0.72 0.10 0.17
Matches are distributed among these distances:
31 15 0.12
32 50 0.40
33 31 0.25
34 3 0.02
35 7 0.06
36 3 0.02
38 8 0.06
39 8 0.06
ACGTcount: A:0.14, C:0.36, G:0.31, T:0.19
Consensus pattern (32 bp):
GTGCGGGAGCCTCGGTCACCATCAGGCCCCTT
Found at i:1128 original size:33 final size:33
Alignment explanation
Indices: 1086--1303 Score: 157
Period size: 33 Copynumber: 6.6 Consensus size: 33
1076 TTGTGCGTGA
*
1086 GCCTCGGTCACCATCGGCAATCCCAGGCGGGTG
1 GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
*
1119 GCCTCGGTCACCATCGGCAAACCCAGACGGGT-
1 GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
* * * * *
1151 GTCTCGGTCACCATCGTC-ACCCCGGGCCTTGGTGCGGG
1 GCCTCGGTCACCATCGGCAAACCCAGG-C---G-G-GTG
** * *
1189 AGCCTC-GTCACCATCAGGC---CCCTTGTGCGTG
1 -GCCTCGGTCACCATC-GGCAAACCCAGGCGGGTG
**
1220 AGCCTCGGTCACCATCGGCAGTCCCAGGCGGGTG
1 -GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
*
1254 GCCTCGGTCACCATCGGCAAACCCA-G-AGGT-
1 GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
*
1284 GTCTCGGTCACCATCGGCAA
1 GCCTCGGTCACCATCGGCAA
1304 CCCCGGGCCA
Statistics
Matches: 149, Mismatches: 23, Indels: 29
0.74 0.11 0.14
Matches are distributed among these distances:
30 19 0.13
31 19 0.13
32 27 0.18
33 54 0.36
34 8 0.05
35 1 0.01
36 1 0.01
37 5 0.03
38 9 0.06
39 6 0.04
ACGTcount: A:0.16, C:0.37, G:0.30, T:0.17
Consensus pattern (33 bp):
GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
Found at i:1211 original size:135 final size:136
Alignment explanation
Indices: 1043--1322 Score: 494
Period size: 135 Copynumber: 2.1 Consensus size: 136
1033 AGACCGAGCG
*
1043 TTGGTGCGGGAGTCTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATC
1 TTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATC
*
1108 CCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGTC-ACC
66 CCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGA--GGTGTCTCGGTCACCATCGGCAACC
1172 CCGGGCC-
129 CCGGGCCA
*
1179 TTGGTGCGGGAGCCTC-GTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAGTC
1 TTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATC
1243 CCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGAGGTGTCTCGGTCACCATCGGCAACCCC
66 CCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGAGGTGTCTCGGTCACCATCGGCAACCCC
1308 GGGCCA
131 GGGCCA
1314 TTGGTGCGG
1 TTGGTGCGG
1323 TAGTGCCGCA
Statistics
Matches: 139, Mismatches: 3, Indels: 5
0.95 0.02 0.03
Matches are distributed among these distances:
133 20 0.14
134 10 0.07
135 94 0.68
136 15 0.11
ACGTcount: A:0.15, C:0.35, G:0.32, T:0.18
Consensus pattern (136 bp):
TTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATC
CCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGAGGTGTCTCGGTCACCATCGGCAACCCC
GGGCCA
Found at i:1260 original size:334 final size:334
Alignment explanation
Indices: 618--1273 Score: 958
Period size: 334 Copynumber: 2.0 Consensus size: 334
608 ACGTGTGCGT
618 GCCTCGGTCACCATCGGCAAAAACAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
1 GCCTCGGTCACCATCGGCAAAAACAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
*
683 GTGCGGGAGTGCCGCACAGAACCGAGCGTTGGTGCGGGAGCCTCGTTCACCATCAGGCCCCCGTG
66 GTGCGGGAGTGCCGCACAGAACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCCGTG
* *
748 GTGCGCCTCGGTCACCATCGGTAATCCAAGGCGGGTGGCCTCGGTCACCATCGACAAACCCAGAC
131 GTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTGGCCTCGGTCACCATCGACAAACCCAGAC
*
813 GGGTGTCTCGGTCACCATCGGCAACCCCGGCCATTGGTGCGGGAGTGCCGCACAGTACCGACTTT
196 GGGTGTCTCGGTCACCATCGGCAACCCCGGCCATTGGTGCGGGAGTGCCGCACAGTACC-ACCTT
* *
878 GGTGCGGGAGCCTCGGTCACCATCAGGCCCCCGTGTGCGTGAGCCTCGGACACCATCGGCAATCC
260 GGTGCGGGAGCCTCGGTCACCATCAGGCCCCAGTGCGCGTGAGCCTCGGACACCATCGGCAATCC
943 TGGGCGGGTG
325 TGGGCGGGTG
**
953 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTC-GTCACCATCGGCAACCCC-GGCCATTG
1 GCCTCGGTCACCATCGGCAAAAACAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
* *
1016 GTGCGGGAGTGCCGCACAG-ACCGAGCGTTGGTGCGGGAGTCTCGGTCACCATCAGGCCCCTTGT
66 GTGCGGGAGTGCCGCACAGAACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCC-CGT
* *
1080 GCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAG
130 G-GTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTGGCCTCGGTCACCATCGACAAACCCAG
*
1145 ACGGGTGTCTCGGTCACCATCGTC-ACCCCGGGCC-TTGGTGCGGGAGCCTCGTCAC-CATCAG-
194 ACGGGTGTCTCGGTCACCATCGGCAACCCC-GGCCATTGGTGCGGGAG--T-G-C-CGCA-CAGT
* * * *
1206 GCC-CCTT-GTGCGTGAGCCTCGGTCACCATC-GGCAGTCCCAG-GCGGGTG-GCCTCGGTCACC
252 ACCACCTTGGTGCGGGAGCCTCGGTCACCATCAGGC---CCCAGTGCGCGTGAGCCTCGGACACC
1266 ATCGGCAA
314 ATCGGCAA
1274 ACCCAGAGGT
Statistics
Matches: 292, Mismatches: 17, Indels: 25
0.87 0.05 0.07
Matches are distributed among these distances:
332 39 0.13
333 50 0.17
334 145 0.50
335 44 0.15
336 5 0.02
337 5 0.02
338 4 0.01
ACGTcount: A:0.16, C:0.35, G:0.32, T:0.17
Consensus pattern (334 bp):
GCCTCGGTCACCATCGGCAAAAACAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
GTGCGGGAGTGCCGCACAGAACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCCGTG
GTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTGGCCTCGGTCACCATCGACAAACCCAGAC
GGGTGTCTCGGTCACCATCGGCAACCCCGGCCATTGGTGCGGGAGTGCCGCACAGTACCACCTTG
GTGCGGGAGCCTCGGTCACCATCAGGCCCCAGTGCGCGTGAGCCTCGGACACCATCGGCAATCCT
GGGCGGGTG
Found at i:1711 original size:11 final size:11
Alignment explanation
Indices: 1690--1722 Score: 57
Period size: 11 Copynumber: 2.9 Consensus size: 11
1680 TCCCGGTGGT
1690 GCTCTCGGCGAC
1 GCTC-CGGCGAC
1702 GCTCCGGCGAC
1 GCTCCGGCGAC
1713 GCTCCGGCGA
1 GCTCCGGCGA
1723 GACATTATCG
Statistics
Matches: 21, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
11 17 0.81
12 4 0.19
ACGTcount: A:0.09, C:0.42, G:0.36, T:0.12
Consensus pattern (11 bp):
GCTCCGGCGAC
Found at i:9778 original size:33 final size:32
Alignment explanation
Indices: 9738--9822 Score: 107
Period size: 33 Copynumber: 2.6 Consensus size: 32
9728 GTGTGCGTGC
* * *
9738 GCCTCGGTCACCATCGGTAATCCAAGGCGGGT
1 GCCTCGGTCACCATCGGCAAACCAAGACGGGT
* *
9770 GGCCTCGGTCACCATCGACAAACCCAGACGGGT
1 -GCCTCGGTCACCATCGGCAAACCAAGACGGGT
*
9803 GTCTCGGTCACCATCGGCAA
1 GCCTCGGTCACCATCGGCAA
9823 CCCGGCCATT
Statistics
Matches: 45, Mismatches: 7, Indels: 1
0.85 0.13 0.02
Matches are distributed among these distances:
32 18 0.40
33 27 0.60
ACGTcount: A:0.21, C:0.34, G:0.28, T:0.16
Consensus pattern (32 bp):
GCCTCGGTCACCATCGGCAAACCAAGACGGGT
Found at i:9981 original size:32 final size:33
Alignment explanation
Indices: 9905--9989 Score: 109
Period size: 33 Copynumber: 2.6 Consensus size: 33
9895 GTGTGCGTGA
* * ** *
9905 GCCTCGGACACCATCGGCAATCCTGGGCGGGTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTG
9938 GCCTCGGTCACCATCGGCAAACCCAGACGGGT-
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTG
*
9970 GTCTCGGTCACCATCGGCAA
1 GCCTCGGTCACCATCGGCAA
9990 CCCCGGGCCA
Statistics
Matches: 46, Mismatches: 6, Indels: 1
0.87 0.11 0.02
Matches are distributed among these distances:
32 19 0.41
33 27 0.59
ACGTcount: A:0.19, C:0.35, G:0.31, T:0.15
Consensus pattern (33 bp):
GCCTCGGTCACCATCGGCAAACCCAGACGGGTG
Found at i:10076 original size:169 final size:168
Alignment explanation
Indices: 9603--10179 Score: 996
Period size: 169 Copynumber: 3.4 Consensus size: 168
9593 ACGTGTGCGT
**
9603 GCCTCGGTCACCATCGGCAAAAACAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAA-CCCGGGCCATTG
*
9668 GTGCGGGAGTGCCGCACAGAA-CGAGCGTTGGTGCGGGAGCCTCGTTCACCATCAGGCCCCGTGT
65 GTGCGGGAGTGCCGCACAGAACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGT
* *
9732 GCGTGCGCCTCGGTCACCATCGGTAATCCAAGGCGGGTG
130 GCGTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTG
*
9771 GCCTCGGTCACCATCGACAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCC-GGCCATTGG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCGGGCCATTGG
* *
9835 TGCGGGAGTGCCGCACAGTACCGAGCTTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGTG
66 TGCGGGAGTGCCGCACAGAACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGTG
* **
9900 CGTGAGCCTCGGACACCATCGGCAATCCTGGGCGGGTG
131 CGTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTG
9938 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAA-CCCGGGCCATTG
* *
10003 GTGCGGGAGTGCCGCACAGAACCGAGCGTTGGTGCGGGAGTCTCGGTCACCATCAGGCCCCTTGT
65 GTGCGGGAGTGCCGCACAGAACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGT
*
10068 GCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTG
130 GCGTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTG
10107 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCGGGCCATTGG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCGGGCCATTGG
10172 TGCGGGAG
66 TGCGGGAG
10180 CCTCGGTCAC
Statistics
Matches: 387, Mismatches: 19, Indels: 6
0.94 0.05 0.01
Matches are distributed among these distances:
166 28 0.07
167 129 0.33
168 73 0.19
169 157 0.41
ACGTcount: A:0.17, C:0.33, G:0.33, T:0.16
Consensus pattern (168 bp):
GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCGGGCCATTGG
TGCGGGAGTGCCGCACAGAACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGTG
CGTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTG
Found at i:10116 original size:33 final size:33
Alignment explanation
Indices: 10074--10295 Score: 197
Period size: 33 Copynumber: 6.6 Consensus size: 33
10064 TTGTGCGTGA
*
10074 GCCTCGGTCACCATCGGCAATCCCAGGCGGGTG
1 GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
*
10107 GCCTCGGTCACCATCGGCAAACCCAGACGGGT-
1 GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
* * *
10139 GTCTCGGTCACCATCGGCAACCCGGGCCATTGGTGCGGG-A
1 GCCTCGGTCACCATCGGCAA-AC---CCA---G-GCGGGTG
* *
10179 GCCTCGGTCACCATCAGGC---CCC-GTGTGCGTG
1 GCCTCGGTCACCATC-GGCAAACCCAG-GCGGGTG
**
10210 AGCCTCGGTCACCATCGGCAGTCCCAGGCGGGTG
1 -GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
*
10244 GCCTCGGTCACCATCGGCAAACCCAGACGGGT-
1 GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
*
10276 GTCTCGGTCACCATCGGCAA
1 GCCTCGGTCACCATCGGCAA
10296 CCCGGGCCAT
Statistics
Matches: 158, Mismatches: 15, Indels: 33
0.77 0.07 0.16
Matches are distributed among these distances:
30 5 0.03
31 3 0.02
32 53 0.34
33 60 0.38
34 10 0.06
35 1 0.01
36 3 0.02
37 1 0.01
39 1 0.01
40 18 0.11
41 3 0.02
ACGTcount: A:0.17, C:0.36, G:0.32, T:0.16
Consensus pattern (33 bp):
GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
Found at i:10120 original size:65 final size:64
Alignment explanation
Indices: 10044--10258 Score: 220
Period size: 65 Copynumber: 3.2 Consensus size: 64
10034 GTGCGGGAGT
10044 CTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGC
1 CTCGGTCACCATCAGGCCCC-TGTGCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGC
* * * * * *
10109 CTCGGTCACCATC-GGCAAACCCAG-ACGGGTGTCTCGGTCACCATCGGCAACCCGGGCCATTGG
1 CTCGGTCACCATCAGGC---CCCTGTGCGTGAGCCTCGGTCACCATCGGCAA-TC---CCA---G
*
10172 TGCGGG-AGC
56 -GCGGGTGGC
*
10181 CTCGGTCACCATCAGGCCCCGTGTGCGTGAGCCTCGGTCACCATCGGCAGTCCCAGGCGGGTGGC
1 CTCGGTCACCATCAGGCCCC-TGTGCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGC
10246 CTCGGTCACCATC
1 CTCGGTCACCATC
10259 GGCAAACCCA
Statistics
Matches: 120, Mismatches: 15, Indels: 30
0.73 0.09 0.18
Matches are distributed among these distances:
64 8 0.07
65 51 0.43
66 2 0.02
67 3 0.03
68 3 0.03
69 3 0.03
70 3 0.03
71 2 0.02
72 37 0.31
73 8 0.07
ACGTcount: A:0.15, C:0.37, G:0.31, T:0.17
Consensus pattern (64 bp):
CTCGGTCACCATCAGGCCCCTGTGCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGC
Found at i:10122 original size:137 final size:137
Alignment explanation
Indices: 9938--10313 Score: 487
Period size: 137 Copynumber: 2.8 Consensus size: 137
9928 TGGGCGGGTG
* * * * * **
9938 GCCTCGGTCACCATCGGCAAACCCAGACGGGT-GTCTCGGTCACCATCGGCAACCCCGGGCCATT
1 GCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCC-AG--ACG
* * *
10002 GGTG-CGGGAGTGC-CGCA-CAG-AA-CCGAG-CGTTGGTGCGGGAGTCTCGGTCACCATCAGGC
63 GGTGTCGCG-GT-CAC-CATCAGCAACCCGAGCCATTGGTGCGGGAGCCTCGGTCACCATCAGGC
*
10061 CCCTTGTGCGTGA
125 CCCGTGTGCGTGA
10074 GCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGACGGGT
1 GCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGACGGGT
* * *
10139 GTCTCGGTCACCATCGGCAACCCGGGCCATTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTG
66 GTCGCGGTCACCATCAGCAACCCGAGCCATTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTG
10204 TGCGTGA
131 TGCGTGA
*
10211 GCCTCGGTCACCATCGGCAGTCCCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGACGGGT
1 GCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGACGGGT
* * *
10276 GTCTCGGTCACCATCGGCAACCCGGGCCATTGGTGCGG
66 GTCGCGGTCACCATCAGCAACCCGAGCCATTGGTGCGG
10314 TAGTGCCGCA
Statistics
Matches: 218, Mismatches: 15, Indels: 13
0.89 0.06 0.05
Matches are distributed among these distances:
133 3 0.01
134 10 0.05
135 4 0.02
136 35 0.16
137 166 0.76
ACGTcount: A:0.16, C:0.35, G:0.33, T:0.16
Consensus pattern (137 bp):
GCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGACGGGT
GTCGCGGTCACCATCAGCAACCCGAGCCATTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTG
TGCGTGA
Found at i:10150 original size:32 final size:32
Alignment explanation
Indices: 10074--10295 Score: 198
Period size: 32 Copynumber: 6.6 Consensus size: 32
10064 TTGTGCGTGA
*
10074 GCCTCGGTCACCATCGGCAATCCCAGGCGGGT
1 GCCTCGGTCACCATCGGCAAACCCAGGCGGGT
*
10106 GGCCTCGGTCACCATCGGCAAACCCAGACGGGT
1 -GCCTCGGTCACCATCGGCAAACCCAGGCGGGT
* * *
10139 GTCTCGGTCACCATCGGCAACCCGGGCCATTGGTGCGGGA
1 GCCTCGGTCACCATCGGCAA-AC---CCA---G-GCGGGT
* * *
10179 GCCTCGGTCACCATCAGGC---CCCGTGTGCGTGA
1 GCCTCGGTCACCATC-GGCAAACCC-AG-GCGGGT
**
10211 GCCTCGGTCACCATCGGCAGTCCCAGGCGGGT
1 GCCTCGGTCACCATCGGCAAACCCAGGCGGGT
*
10243 GGCCTCGGTCACCATCGGCAAACCCAGACGGGT
1 -GCCTCGGTCACCATCGGCAAACCCAGGCGGGT
*
10276 GTCTCGGTCACCATCGGCAA
1 GCCTCGGTCACCATCGGCAA
10296 CCCGGGCCAT
Statistics
Matches: 159, Mismatches: 16, Indels: 29
0.78 0.08 0.14
Matches are distributed among these distances:
31 3 0.02
32 64 0.40
33 61 0.38
34 5 0.03
36 3 0.02
37 1 0.01
39 1 0.01
40 18 0.11
41 3 0.02
ACGTcount: A:0.17, C:0.36, G:0.32, T:0.16
Consensus pattern (32 bp):
GCCTCGGTCACCATCGGCAAACCCAGGCGGGT
Found at i:10219 original size:169 final size:167
Alignment explanation
Indices: 9603--10295 Score: 909
Period size: 169 Copynumber: 4.1 Consensus size: 167
9593 ACGTGTGCGT
**
9603 GCCTCGGTCACCATCGGCAAAAACAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
** * * *
9668 GTGCGGGAGTGCCGCACAGAACGAGCGTTGGTGCGGGAGCCTCGTTCACCATCAGGCCCCGTGTG
66 GTGCGGGAGTGCCGCACATCA-GAGCATCGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGTG
* * *
9733 CGTGCGCCTCGGTCACCATCGGTAATCCAAGGCGGGTG
130 CGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTG
*
9771 GCCTCGGTCACCATCGACAAACCCAGACGGGTGTCTCGGTCACCATCGGCAA-CCC-GGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
* * *
9834 GTGCGGGAGTGCCGCACAGTACCGAGCTTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGT
66 GTGCGGGAGTGCCGCACA-T-CAGAGCATCGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGT
* **
9899 GCGTGAGCCTCGGACACCATCGGCAATCCTGGGCGGGTG
129 GCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTG
9938 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
* * * * * *
10003 GTGCGGGAGTGCCGCACAGAACCGAGCGTTGGTGCGGGAGTCTCGGTCACCATCAGGCCCCTTGT
66 GTGCGGGAGTGCCGCAC--ATCAGAGCATCGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGT
10068 GCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTG
129 GCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTG
10107 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAA-CCCGGGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
* ** *
10171 GTGCGGGAGCCT-CGGTCACCATCAG-GCCCCGTGTGCGTGAGCCTCGGTCACCATC-GGCAGTC
66 GTGCGGGAG--TGCCG-CA-CATCAGAGCATCG-GTGCGGGAGCCTCGGTCACCATCAGGC---C
* * * *
10233 CCAG-GCGGGTG-GCCTCGGTCACCATCGGCAAACCCAGACGGGT-
123 CC-GTGTGCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTG
*
10276 GTCTCGGTCACCATCGGCAA
1 GCCTCGGTCACCATCGGCAA
10296 CCCGGGCCAT
Statistics
Matches: 475, Mismatches: 35, Indels: 29
0.88 0.06 0.05
Matches are distributed among these distances:
166 26 0.05
167 128 0.27
168 79 0.17
169 199 0.42
170 33 0.07
171 10 0.02
ACGTcount: A:0.17, C:0.34, G:0.33, T:0.16
Consensus pattern (167 bp):
GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
GTGCGGGAGTGCCGCACATCAGAGCATCGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGTGC
GTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTG
Found at i:10699 original size:11 final size:11
Alignment explanation
Indices: 10685--10716 Score: 64
Period size: 11 Copynumber: 2.9 Consensus size: 11
10675 TCCCGGTGGT
10685 GCTCCGGCGAC
1 GCTCCGGCGAC
10696 GCTCCGGCGAC
1 GCTCCGGCGAC
10707 GCTCCGGCGA
1 GCTCCGGCGA
10717 GACATTATCG
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 21 1.00
ACGTcount: A:0.09, C:0.44, G:0.38, T:0.09
Consensus pattern (11 bp):
GCTCCGGCGAC
Found at i:23447 original size:33 final size:32
Alignment explanation
Indices: 23407--23491 Score: 107
Period size: 33 Copynumber: 2.6 Consensus size: 32
23397 GTGTGCGTGC
* * *
23407 GCCTCGGTCACCATCGGTAATCCAAGGCGGGT
1 GCCTCGGTCACCATCGGCAAACCAAGACGGGT
* *
23439 GGCCTCGGTCACCATCGACAAACCCAGACGGGT
1 -GCCTCGGTCACCATCGGCAAACCAAGACGGGT
*
23472 GTCTCGGTCACCATCGGCAA
1 GCCTCGGTCACCATCGGCAA
23492 CCCCGGCCAT
Statistics
Matches: 45, Mismatches: 7, Indels: 1
0.85 0.13 0.02
Matches are distributed among these distances:
32 18 0.40
33 27 0.60
ACGTcount: A:0.21, C:0.34, G:0.28, T:0.16
Consensus pattern (32 bp):
GCCTCGGTCACCATCGGCAAACCAAGACGGGT
Found at i:23556 original size:168 final size:168
Alignment explanation
Indices: 23271--23849 Score: 1007
Period size: 168 Copynumber: 3.4 Consensus size: 168
23261 ACGTGTGCGT
**
23271 GCCTCGGTCACCATCGGCAAAAACAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
*
23336 GTGCGGGAGTGCCGCACAGAACCGAGCGTTGGTGCGGGAGCCTCGTTCACCATCAGGCCCCGTGT
66 GTGCGGGAGTGCCGCACAG-ACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGT
* *
23401 GCGTGCGCCTCGGTCACCATCGGTAATCCAAGGCGGGTG
130 GCGTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTG
*
23440 GCCTCGGTCACCATCGACAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCC-GGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
*
23504 GTGCGGGAGTGCCGCACAGTACCGAGCTTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGT
66 GTGCGGGAGTGCCGCACAG-ACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGT
* **
23569 GCGTGAGCCTCGGACACCATCGGCAATCCTGGGCGGGTG
130 GCGTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTG
23608 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
* * *
23673 GTGCGGGAGTGCCGCACAGAACGAGCGTTGGTGCGGGAGTCTCGGTCACCATCAGGCCCCTTGTG
66 GTGCGGGAGTGCCGCACAGACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGTG
*
23738 CGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTG
131 CGTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTG
23776 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
23841 GTGCGGGAG
66 GTGCGGGAG
23850 CCTCGGTCAC
Statistics
Matches: 390, Mismatches: 19, Indels: 3
0.95 0.05 0.01
Matches are distributed among these distances:
168 310 0.79
169 80 0.21
ACGTcount: A:0.17, C:0.34, G:0.33, T:0.16
Consensus pattern (168 bp):
GCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATTG
GTGCGGGAGTGCCGCACAGACCGAGCGTTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCGTGTG
CGTGAGCCTCGGTCACCATCGGCAATCCAAGGCGGGTG
Found at i:23651 original size:32 final size:33
Alignment explanation
Indices: 23575--23659 Score: 109
Period size: 33 Copynumber: 2.6 Consensus size: 33
23565 GTGTGCGTGA
* * ** *
23575 GCCTCGGACACCATCGGCAATCCTGGGCGGGTG
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTG
23608 GCCTCGGTCACCATCGGCAAACCCAGACGGGT-
1 GCCTCGGTCACCATCGGCAAACCCAGACGGGTG
*
23640 GTCTCGGTCACCATCGGCAA
1 GCCTCGGTCACCATCGGCAA
23660 CCCCGGGCCA
Statistics
Matches: 46, Mismatches: 6, Indels: 1
0.87 0.11 0.02
Matches are distributed among these distances:
32 19 0.41
33 27 0.59
ACGTcount: A:0.19, C:0.35, G:0.31, T:0.15
Consensus pattern (33 bp):
GCCTCGGTCACCATCGGCAAACCCAGACGGGTG
Found at i:23785 original size:33 final size:33
Alignment explanation
Indices: 23743--23965 Score: 195
Period size: 32 Copynumber: 6.6 Consensus size: 33
23733 TTGTGCGTGA
*
23743 GCCTCGGTCACCATCGGCAATCCCAGGCGGGTG
1 GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
*
23776 GCCTCGGTCACCATCGGCAAACCCAGACGGGT-
1 GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
* * * *
23808 GTCTCGGTCACCATCGGCAACCCCGGGCCATTGGTGCGGG
1 GCCTCGGTCACCATCGGCAAACCCAGG-C----G-G-GTG
** * *
23848 AGCCTCGGTCACCATCAGGC---CCCTTGTGCGTG
1 -GCCTCGGTCACCATC-GGCAAACCCAGGCGGGTG
**
23880 AGCCTCGGTCACCATCGGCAGTCCCAGGCGGGTG
1 -GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
*
23914 GCCTCGGTCACCATCGGCAAACCCAGACGGGT-
1 GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
*
23946 GTCTCGGTCACCATCGGCAA
1 GCCTCGGTCACCATCGGCAA
23966 CCCCGGGCCA
Statistics
Matches: 156, Mismatches: 21, Indels: 27
0.76 0.10 0.13
Matches are distributed among these distances:
31 3 0.02
32 60 0.38
33 60 0.38
34 9 0.06
37 1 0.01
38 1 0.01
39 5 0.03
41 14 0.09
42 3 0.02
ACGTcount: A:0.17, C:0.36, G:0.31, T:0.16
Consensus pattern (33 bp):
GCCTCGGTCACCATCGGCAAACCCAGGCGGGTG
Found at i:23789 original size:65 final size:65
Alignment explanation
Indices: 23713--23928 Score: 231
Period size: 65 Copynumber: 3.2 Consensus size: 65
23703 GTGCGGGAGT
23713 CTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGC
1 CTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGC
* * * * * * *
23778 CTCGGTCACCATC-GGCAAACCC-AG-ACGGGTGTCTCGGTCACCATCGGCAACCCCGGGCCATT
1 CTCGGTCACCATCAGGC---CCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATCCCAGG-C---
*
23840 GGTGCGGGAGC
59 -G-G-GTG-GC
*
23851 CTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAGTCCCAGGCGGGTGGC
1 CTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGC
23916 CTCGGTCACCATC
1 CTCGGTCACCATC
23929 GGCAAACCCA
Statistics
Matches: 120, Mismatches: 17, Indels: 28
0.73 0.10 0.17
Matches are distributed among these distances:
64 3 0.03
65 55 0.46
66 4 0.03
67 4 0.03
68 1 0.01
70 1 0.01
71 4 0.03
72 4 0.03
73 41 0.34
74 3 0.03
ACGTcount: A:0.15, C:0.37, G:0.31, T:0.18
Consensus pattern (65 bp):
CTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATCCCAGGCGGGTGGC
Found at i:23869 original size:138 final size:138
Alignment explanation
Indices: 23700--23984 Score: 552
Period size: 138 Copynumber: 2.1 Consensus size: 138
23690 AGAACGAGCG
*
23700 TTGGTGCGGGAGTCTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATC
1 TTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATC
23765 CCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACC
66 CCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACC
23830 CCGGGCCA
131 CCGGGCCA
*
23838 TTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAGTC
1 TTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATC
23903 CCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACC
66 CCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACC
23968 CCGGGCCA
131 CCGGGCCA
23976 TTGGTGCGG
1 TTGGTGCGG
23985 TAGTGCCGCA
Statistics
Matches: 145, Mismatches: 2, Indels: 0
0.99 0.01 0.00
Matches are distributed among these distances:
138 145 1.00
ACGTcount: A:0.15, C:0.35, G:0.32, T:0.18
Consensus pattern (138 bp):
TTGGTGCGGGAGCCTCGGTCACCATCAGGCCCCTTGTGCGTGAGCCTCGGTCACCATCGGCAATC
CCAGGCGGGTGGCCTCGGTCACCATCGGCAAACCCAGACGGGTGTCTCGGTCACCATCGGCAACC
CCGGGCCA
Found at i:24375 original size:11 final size:11
Alignment explanation
Indices: 24359--24386 Score: 56
Period size: 11 Copynumber: 2.5 Consensus size: 11
24349 CGGTGGTGCT
24359 CGGCGACGCTC
1 CGGCGACGCTC
24370 CGGCGACGCTC
1 CGGCGACGCTC
24381 CGGCGA
1 CGGCGA
24387 GACATTATCG
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 17 1.00
ACGTcount: A:0.11, C:0.43, G:0.39, T:0.07
Consensus pattern (11 bp):
CGGCGACGCTC
Found at i:26992 original size:13 final size:13
Alignment explanation
Indices: 26974--27000 Score: 54
Period size: 13 Copynumber: 2.1 Consensus size: 13
26964 TCGGGGCATC
26974 GTATTCATAGTCA
1 GTATTCATAGTCA
26987 GTATTCATAGTCA
1 GTATTCATAGTCA
27000 G
1 G
27001 AGGTGAAATT
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 14 1.00
ACGTcount: A:0.30, C:0.15, G:0.19, T:0.37
Consensus pattern (13 bp):
GTATTCATAGTCA
Done.