Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009514.1 Hibiscus syriacus cultivar Beakdansim tig00115601_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14812

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7665--7838
91
1.9
93
89
2
271
11
37
34
16
1.84
7810--7943
32
4.2
32
88
1
187
15
30
35
17
1.92
7978--8111
63
2.1
62
97
1
250
10
37
38
13
1.79
7978--8075
31
3.1
31
66
13
92
9
37
39
13
1.76
7738--8100
190
1.9
187
84
8
477
12
34
35
16
1.87
8001--8104
31
3.3
32
68
15
92
11
34
40
13
1.81
7906--8191
156
1.8
156
86
8
422
12
37
34
16
1.86
8156--8285
31
4.2
32
89
6
187
14
31
35
18
1.91
8156--8285
63
2.1
62
87
7
183
14
31
35
18
1.91
8331--8419
33
2.8
32
82
1
115
14
28
37
20
1.92
8371--8435
33
2.0
32
82
11
78
15
32
35
16
1.91

Tables:   1

The End!