Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009527.1 Hibiscus syriacus cultivar Beakdansim tig00116012_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23416

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39--77
10
3.9
10
100
0
78
10
48
30
10
1.70
12749--12827
33
2.5
32
83
6
90
20
35
27
16
1.94
12915--12998
33
2.6
32
84
3
98
19
34
30
15
1.93
12613--13188
167
3.4
170
92
3
979
17
33
32
15
1.92
13082--13306
32
6.7
32
75
15
188
16
36
30
16
1.90
13052--13267
65
3.2
65
72
16
231
14
37
30
17
1.90
13039--13322
138
2.1
137
97
0
541
15
34
32
17
1.91
13220--13303
31
2.6
32
88
3
116
17
35
30
15
1.91
13693--13724
11
2.9
11
100
0
64
9
43
37
9
1.69

Tables:   1

The End!