Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009528.1 Hibiscus syriacus cultivar Beakdansim tig00116014_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46955

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--18234
303
61.6
303
92
4
30097
24
23
26
26
2.00
18867--18941
35
2.1
35
92
0
123
33
29
28
9
1.88
19018--19107
23
3.8
23
82
4
99
38
18
14
27
1.90
21541--21588
10
5.6
9
85
14
50
22
22
35
18
1.96
21542--21601
8
7.5
8
77
21
56
21
23
38
16
1.93
21575--21657
13
6.4
13
95
0
130
16
20
44
18
1.87
23618--23692
35
2.1
35
92
0
123
33
29
28
9
1.88
23753--23804
24
2.2
24
85
0
68
42
17
9
30
1.81
23770--23859
23
3.8
23
82
4
99
38
18
14
27
1.90
26300--26346
10
5.5
8
82
14
51
23
23
36
17
1.95
26333--26419
13
6.4
13
81
15
95
16
19
45
18
1.85
26354--26393
18
2.2
18
100
0
80
10
20
47
22
1.79
27185--46955
301
66.4
303
93
3
33637
24
22
26
25
2.00

Tables:   1

The End!