Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000953.1 Hibiscus syriacus cultivar Beakdansim tig00001907_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66675

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11092--11147
28
2.0
28
86
6
78
30
1
0
67
1.01
11051--11124
20
3.7
20
71
10
69
31
5
2
60
1.33
11094--11144
12
3.8
13
74
20
52
27
1
0
70
0.98
17977--18045
20
3.4
20
70
9
59
75
2
14
7
1.13
17988--18044
20
2.7
22
76
10
66
73
3
15
7
1.18
32580--32690
43
2.6
43
76
1
125
32
20
13
33
1.92
34466--34772
158
1.9
158
98
0
596
28
23
13
34
1.93
36664--36708
23
2.0
23
95
0
81
20
8
31
40
1.83
37895--37921
13
2.1
13
100
0
54
55
0
0
44
0.99
37980--38030
23
2.2
24
92
3
86
43
0
7
49
1.32
38213--38252
11
3.5
11
83
6
53
47
5
7
40
1.54
38799--38876
25
3.1
25
85
3
77
33
6
12
47
1.67
38808--38883
13
5.9
14
69
18
67
28
7
14
48
1.72
38810--38887
25
3.1
25
90
0
120
28
8
14
48
1.73
39583--39654
29
2.6
28
84
6
94
54
0
0
45
0.99
39588--39671
6
15.2
6
73
23
60
53
1
0
45
1.08
39687--39749
31
2.0
31
90
0
99
53
3
1
41
1.26
39694--39740
24
1.9
25
82
4
60
55
4
2
38
1.31
39692--39872
66
2.7
65
75
13
172
47
2
5
44
1.40
39585--39865
65
4.3
63
75
13
198
49
2
4
44
1.34
40696--40758
22
2.9
21
83
6
81
20
46
20
12
1.83
41521--41557
15
2.5
15
87
12
51
24
13
10
51
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47519--47588
29
2.4
29
85
7
97
31
5
21
41
1.76
48339--48375
15
2.5
15
87
12
51
24
16
10
48
1.77
49082--49139
20
2.7
22
74
17
59
41
12
6
39
1.69
49282--49326
21
2.1
21
84
8
56
24
2
24
48
1.62
49309--49413
49
2.1
48
81
8
131
33
7
9
49
1.64
49401--49437
15
2.4
15
90
4
56
43
2
2
51
1.30
49551--49717
2
85.0
2
74
14
134
46
4
1
47
1.32
49318--49560
84
2.9
83
71
10
242
35
8
9
46
1.66
50138--50240
13
7.3
13
73
17
64
42
6
5
44
1.55
50208--50258
18
2.7
19
82
11
61
47
1
5
45
1.38
50138--50255
13
7.9
14
75
15
62
43
5
5
44
1.53
50224--50259
18
2.1
18
94
5
65
50
0
5
44
1.25
55216--55275
31
2.0
31
83
3
77
33
25
10
31
1.89
62039--62084
24
1.9
24
100
0
92
41
15
13
30
1.85
64234--64258
13
1.9
13
100
0
50
68
0
0
32
0.90

Tables:   1

The End!