Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009545.1 Hibiscus syriacus cultivar Beakdansim tig00116416_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47363

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19019--19103
33
2.6
33
88
1
118
20
34
29
16
1.94
18882--19463
169
3.4
170
96
0
1051
17
33
33
16
1.92
19188--19272
33
2.6
33
90
1
127
20
35
29
15
1.93
19357--19547
33
5.6
33
77
11
197
17
35
31
15
1.91
19357--19547
65
2.8
66
74
13
197
17
35
31
15
1.91
19349--19569
106
2.1
106
97
0
415
16
34
33
15
1.91
19939--19970
11
2.9
11
95
0
55
9
40
37
12
1.75
40135--40219
33
2.6
33
88
1
118
20
34
29
16
1.94
39998--40578
169
3.4
170
95
0
1042
17
33
33
16
1.92
40304--40388
33
2.6
33
90
1
127
20
35
29
15
1.93
40473--40662
33
5.6
33
76
12
188
17
35
31
15
1.91
40465--40684
105
2.1
106
96
0
406
16
34
33
15
1.91
40296--40753
137
3.4
137
76
13
535
16
34
33
15
1.91
41052--41083
11
2.9
11
95
0
55
9
40
37
12
1.75

Tables:   1

The End!