Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009546.1 Hibiscus syriacus cultivar Beakdansim tig00116418_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42180

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3070--3154
33
2.6
33
88
1
118
20
34
29
16
1.94
2933--3514
169
3.4
170
96
0
1051
17
33
33
16
1.92
3239--3323
33
2.6
33
90
1
127
20
35
29
15
1.93
3408--3598
33
5.6
33
77
11
197
17
35
31
15
1.91
3408--3598
65
2.8
66
74
13
197
17
35
31
15
1.91
3400--3620
106
2.1
106
97
0
415
16
34
33
15
1.91
3989--4020
11
2.9
11
95
0
55
9
40
37
12
1.75
24172--24256
33
2.6
33
88
1
118
20
34
29
16
1.94
24035--24616
169
3.4
170
96
0
1051
17
33
33
16
1.92
24341--24425
33
2.6
33
90
1
127
20
35
29
15
1.93
24510--24700
33
5.6
33
77
11
197
17
35
31
15
1.91
24510--24700
65
2.8
66
74
13
197
17
35
31
15
1.91
24502--24722
106
2.1
106
97
0
415
16
34
33
15
1.91
25091--25122
11
2.9
11
95
0
55
9
40
37
12
1.75
33182--33266
33
2.6
33
88
1
118
20
34
29
16
1.94
33045--33625
169
3.4
170
95
1
1042
17
33
33
16
1.92
33351--33435
33
2.6
33
90
1
127
20
35
29
15
1.93
33519--33709
33
5.6
33
77
11
197
17
35
31
15
1.91
33519--33709
65
2.8
66
74
13
197
17
35
31
15
1.91
33511--33731
106
2.1
106
97
0
415
16
34
33
15
1.91
34100--34131
11
2.9
11
95
0
55
9
40
37
12
1.75

Tables:   1

The End!