Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009547.1 Hibiscus syriacus cultivar Beakdansim tig00116419_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44052

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--25470
303
85.9
303
93
4
43404
25
27
22
24
2.00
1--25470
905
28.6
908
93
4
43290
25
27
22
24
2.00
25796--25825
15
2.1
14
93
6
51
76
6
0
16
0.99
27605--27965
84
4.3
83
81
4
388
25
21
24
29
1.99
27613--27992
164
2.3
164
83
3
440
25
21
24
28
1.99
28188--29423
106
11.7
106
93
0
2014
23
17
25
33
1.96
28188--29423
423
2.9
424
94
0
2122
23
17
25
33
1.96
28188--29423
529
2.3
529
93
0
2048
23
17
25
33
1.96
37665--37703
19
2.1
19
100
0
78
30
23
35
10
1.88
34362--44052
301
32.4
303
90
3
15342
26
26
22
24
2.00

Tables:   1

The End!