Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000955.1 Hibiscus syriacus cultivar Beakdansim tig00001911_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58251

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
120--326
90
2.3
90
88
1
290
29
21
27
21
1.99
11272--11430
41
3.9
41
92
0
273
39
18
19
22
1.92
18735--18777
20
2.2
20
91
4
70
37
9
4
48
1.56
19297--19332
15
2.4
15
95
0
63
8
30
0
61
1.26
23325--23384
30
2.0
31
86
3
86
53
10
8
28
1.63
27598--27637
15
2.7
15
85
11
55
57
0
25
17
1.40
30914--30953
15
2.7
15
85
11
55
60
0
22
17
1.37
33010--33072
27
2.3
27
94
2
108
39
9
22
28
1.85
33069--33100
15
2.1
16
88
11
50
75
9
6
9
1.20
35044--35147
49
2.0
53
89
9
162
1
37
3
56
1.28
36309--36348
13
3.2
13
86
10
57
50
2
0
47
1.14
41460--41526
2
33.5
2
100
0
134
49
0
0
50
1.00

Tables:   1

The End!