Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009556.1 Hibiscus syriacus cultivar Beakdansim tig00116502_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32128

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
238--424
32
5.6
32
76
13
169
16
31
35
17
1.91
216--434
104
2.1
106
95
1
397
15
33
34
15
1.90
345--426
33
2.5
33
92
2
130
15
30
36
17
1.91
511--594
33
2.6
33
88
3
118
15
28
35
20
1.93
682--760
33
2.5
32
82
9
92
16
29
35
18
1.93
321--896
169
3.4
168
94
2
982
16
32
33
17
1.92
8804--8836
11
3.0
11
90
0
57
15
36
39
9
1.79
9227--9417
33
5.6
33
77
11
197
15
31
35
17
1.91
9205--9425
106
2.1
106
97
0
415
15
33
34
16
1.91
9311--9892
169
3.4
170
96
0
1051
16
33
33
17
1.92
9502--9586
33
2.6
33
90
1
127
15
29
35
20
1.93
9674--9755
33
2.5
33
88
2
112
17
30
34
18
1.94
17815--17847
11
3.0
11
90
0
57
15
36
39
9
1.79
18238--18428
33
5.6
33
77
11
197
15
31
35
17
1.91
18216--18436
106
2.1
106
97
0
415
15
33
34
16
1.91
18322--18903
169
3.4
170
96
0
1051
16
33
33
17
1.92
18513--18597
33
2.6
33
90
1
127
15
29
35
20
1.93
18685--18766
33
2.5
33
88
2
112
17
30
34
18
1.94
31479--31511
11
3.0
11
90
0
57
15
36
39
9
1.79
31809--32061
102
2.5
101
83
7
287
14
35
33
16
1.89
31899--32086
33
5.6
33
74
16
163
15
31
34
18
1.92
31877--32082
104
2.0
103
94
2
360
15
33
33
17
1.91

Tables:   1

The End!