Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000957.1 Hibiscus syriacus cultivar Beakdansim tig00001913_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73636

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6175--6217
2
21.5
2
100
0
86
51
0
0
48
1.00
6238--6401
85
1.9
85
81
2
195
31
17
17
32
1.94
6381--6424
13
3.4
13
87
0
61
34
15
18
31
1.92
6799--6847
25
2.0
24
88
4
71
24
16
6
53
1.66
7219--7368
47
3.2
46
78
10
160
42
18
14
25
1.87
7210--7368
48
3.3
47
79
7
178
42
17
14
25
1.87
10225--10291
26
2.7
25
76
13
66
47
1
2
47
1.26
12466--12498
17
1.9
17
88
11
50
33
3
0
63
1.10
15443--15525
3
28.3
3
79
9
91
42
0
0
57
0.98
15445--15525
12
6.9
12
84
6
105
41
0
0
58
0.98
15934--15984
22
2.5
20
85
14
77
78
3
17
0
0.90
16856--16908
23
2.5
22
82
17
67
35
0
3
60
1.15
20185--20225
7
5.9
7
78
21
50
14
17
9
58
1.62
22465--22518
2
27.0
2
100
0
108
50
0
0
50
1.00
25116--25338
114
2.0
114
90
0
356
33
14
20
31
1.93
27330--27484
54
2.9
54
91
0
247
37
16
22
23
1.93
28550--28959
76
5.4
76
97
0
748
22
21
20
34
1.96
29113--29201
12
6.7
14
78
18
84
42
0
0
57
0.98
29136--29199
9
6.7
9
76
16
58
42
0
0
57
0.98
29113--29189
3
26.3
3
79
10
88
41
0
0
58
0.98
29609--29668
11
5.5
10
77
15
57
78
5
16
0
0.92
29609--29676
22
3.0
21
78
18
75
77
4
17
0
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30519--30568
11
4.5
11
82
2
55
32
0
4
64
1.12
30577--30623
23
2.0
24
87
4
69
31
0
2
65
1.04
35946--36039
44
2.3
41
81
16
117
46
13
9
29
1.75
35962--36050
43
2.0
44
97
2
171
43
14
8
32
1.77
42167--42223
15
3.7
15
75
9
51
42
0
3
54
1.17
42190--42223
15
2.2
16
89
5
52
41
0
2
55
1.15
45279--45336
3
19.0
3
80
16
66
34
0
0
65
0.93
47483--47515
16
2.1
16
88
11
50
39
0
0
60
0.97
47521--47554
17
2.0
17
88
11
52
29
5
0
64
1.17
47659--47721
33
2.0
33
84
6
85
41
0
1
57
1.08
50090--50135
6
7.7
6
82
0
56
23
17
6
52
1.68
50090--50135
18
2.6
18
92
0
74
23
17
6
52
1.68
52228--52256
2
14.5
2
100
0
58
48
0
0
51
1.00
54875--55211
114
3.0
114
94
0
577
32
14
20
31
1.93
57350--57407
3
19.0
3
83
16
75
32
0
0
67
0.91
58622--58654
16
2.1
16
100
0
66
33
0
0
66
0.92
58660--58693
17
2.0
17
88
11
52
29
5
0
64
1.17
58823--58885
33
2.0
33
84
6
85
41
0
1
57
1.08
61975--62008
13
2.5
14
90
9
61
52
0
0
47
1.00
62187--62278
35
2.6
37
86
6
127
18
16
20
44
1.87
62303--62456
43
3.5
42
71
15
141
24
20
18
36
1.95
65122--65184
31
2.0
31
100
0
126
33
22
6
38
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66799--66864
2
33.0
2
100
0
132
50
0
0
50
1.00
73302--73496
74
2.7
75
80
7
204
21
24
28
25
1.99

Tables:   1

The End!