Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000958.1 Hibiscus syriacus cultivar Beakdansim tig00001914_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36597

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110--167
15
4.3
15
73
22
56
10
12
24
53
1.68
111--186
25
3.1
25
84
3
93
13
10
21
55
1.67
893--967
10
7.7
10
69
21
61
9
12
21
57
1.62
899--963
16
4.1
16
95
0
121
7
12
23
56
1.61
4222--4262
20
2.0
21
95
4
75
24
26
19
29
1.98
4868--4933
32
2.1
32
100
0
132
18
18
37
25
1.93
5688--5841
31
5.0
31
91
1
247
37
20
19
22
1.94
6689--6732
20
2.1
21
87
4
63
15
25
27
31
1.96
9677--9830
31
5.0
31
93
1
256
37
20
20
22
1.95
10687--10731
21
2.1
21
87
0
63
15
24
28
31
1.96
14070--14198
68
1.9
67
82
4
161
31
10
6
52
1.59
16405--16588
62
2.9
60
84
11
219
30
10
11
47
1.74
16364--16625
64
4.0
65
79
15
272
30
12
12
44
1.79
18981--19109
63
2.0
63
80
5
145
33
17
13
35
1.89
31213--31259
24
2.0
24
95
0
85
44
40
0
14
1.46

Tables:   1

The End!