Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009593.1 Hibiscus syriacus cultivar Beakdansim tig00116972_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57557

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2883--2941
29
2.0
29
100
0
118
23
13
13
49
1.78
3645--3673
2
14.5
2
100
0
58
51
0
48
0
1.00
20623--20666
3
15.0
3
95
4
81
34
0
0
65
0.93
22845--22889
21
2.1
21
87
0
63
31
28
24
15
1.96
24183--24337
30
5.1
30
96
1
258
21
22
25
30
1.99
26806--26881
15
5.1
15
66
13
50
28
7
19
43
1.79
26872--27226
194
1.8
193
88
0
548
37
13
11
37
1.81
26896--27298
194
2.1
193
83
1
484
37
12
11
37
1.80
37042--37222
64
2.8
65
80
5
163
28
17
24
29
1.97
37170--37220
19
2.7
19
85
8
70
25
15
35
23
1.94
37064--37222
65
2.5
65
85
3
205
27
16
25
30
1.96
43651--43690
21
1.9
21
85
10
55
35
10
2
52
1.48
45634--45796
65
2.5
64
81
5
195
28
16
25
30
1.97
45744--45794
19
2.7
19
85
8
70
25
15
35
23
1.94
45638--45845
65
3.2
65
78
13
182
27
17
24
30
1.97
46776--46811
15
2.3
16
90
4
56
33
2
2
61
1.25

Tables:   1

The End!