Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000096.1 Hibiscus syriacus cultivar Beakdansim tig00000179_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70440

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6489--6594
55
1.9
55
96
0
194
26
17
14
41
1.88
12521--12653
35
3.8
35
83
5
178
21
22
18
36
1.95
12521--12664
71
2.0
71
87
2
209
21
22
17
38
1.93
15433--15549
59
2.0
59
96
0
216
34
15
6
43
1.73
19840--19881
14
2.9
14
83
16
50
14
14
2
69
1.30
21468--21684
78
2.8
78
91
6
343
21
19
34
23
1.96
24282--24340
20
2.9
20
80
9
66
11
25
38
23
1.89
30097--30309
78
2.8
78
95
3
380
21
20
33
24
1.97
38471--38502
9
3.6
9
100
0
64
9
0
18
71
1.12
38654--38764
50
2.2
50
95
0
195
29
32
12
25
1.93
41458--41488
9
3.4
9
100
0
62
19
0
48
32
1.49
43932--43995
2
32.0
2
100
0
128
50
0
0
50
1.00
47751--47820
24
2.8
24
86
4
95
48
7
15
28
1.71
53705--53737
16
1.9
18
88
11
52
36
0
3
60
1.12
54968--55006
21
1.9
20
89
5
60
46
12
0
41
1.42
65476--65641
5
33.8
5
68
20
66
72
1
4
22
1.09
65525--65641
9
12.8
9
70
21
75
75
0
3
21
0.95
65492--65587
42
2.3
41
82
5
113
70
1
5
22
1.13
65528--65587
21
2.9
20
79
16
68
76
0
5
18
0.96
65520--65641
56
2.2
56
84
10
153
74
0
3
22
0.96
66417--66446
16
1.9
15
93
6
51
13
26
40
20
1.89
66681--66780
29
3.4
27
74
13
83
48
5
1
46
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66757--66979
35
6.1
36
76
17
178
45
6
4
43
1.50
66743--66964
106
2.1
103
83
13
274
45
5
4
44
1.48
67547--68327
84
9.5
84
83
5
873
22
19
25
32
1.97
67577--68327
165
4.6
165
86
5
859
23
19
25
32
1.97
69441--69692
95
2.7
97
80
11
290
30
19
16
33
1.94

Tables:   1

The End!