Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01009605.1 Hibiscus syriacus cultivar Beakdansim tig00116989_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 9158330
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
File 14 of 35
Found at i:3023614 original size:34 final size:34
Alignment explanation
Indices: 3023535--3023614 Score: 90
Period size: 34 Copynumber: 2.4 Consensus size: 34
3023525 GATTTAAATA
*
3023535 ATCTAGTTCATTTAGGGAAGTAGTTCATTTATGC
1 ATCTAGTTCATTTAGGGAAGTAGTTCATTCATGC
* * * * *
3023569 CTTTAGATCATTTA-GTAAGCTATTTCATTCATGC
1 ATCTAGTTCATTTAGGGAAG-TAGTTCATTCATGC
3023603 ATCTAGTTCATT
1 ATCTAGTTCATT
3023615 AATAAAGTTA
Statistics
Matches: 36, Mismatches: 9, Indels: 2
0.77 0.19 0.04
Matches are distributed among these distances:
33 4 0.11
34 32 0.89
ACGTcount: A:0.26, C:0.15, G:0.15, T:0.44
Consensus pattern (34 bp):
ATCTAGTTCATTTAGGGAAGTAGTTCATTCATGC
Found at i:3023631 original size:51 final size:51
Alignment explanation
Indices: 3023571--3023671 Score: 116
Period size: 51 Copynumber: 2.0 Consensus size: 51
3023561 ATTTATGCCT
* * *
3023571 TTAGATCATTTAGTAAGCTA-TTTCATTCATGC-ATCTAGTTCATTAATAAAG
1 TTAGATCATTAAGTAAACTAGTTT-ATTCAT-CAAACTAGTTCATTAATAAAG
* * *
3023622 TTAGTTCATTAATTAAACTAGTTTATTCATCAAACTAGTTCATTTATAAA
1 TTAGATCATTAAGTAAACTAGTTTATTCATCAAACTAGTTCATTAATAAA
3023672 ACTTACTATT
Statistics
Matches: 42, Mismatches: 6, Indels: 4
0.81 0.12 0.08
Matches are distributed among these distances:
50 1 0.02
51 38 0.90
52 3 0.07
ACGTcount: A:0.36, C:0.13, G:0.09, T:0.43
Consensus pattern (51 bp):
TTAGATCATTAAGTAAACTAGTTTATTCATCAAACTAGTTCATTAATAAAG
Found at i:3023673 original size:17 final size:17
Alignment explanation
Indices: 3023605--3023674 Score: 77
Period size: 17 Copynumber: 4.1 Consensus size: 17
3023595 ATTCATGCAT
*
3023605 CTAGTTCATTAATAAAG
1 CTAGTTCATTAATAAAA
* *
3023622 TTAGTTCATTAATTAAA
1 CTAGTTCATTAATAAAA
* * *
3023639 CTAGTTTATTCATCAAA
1 CTAGTTCATTAATAAAA
*
3023656 CTAGTTCATTTATAAAA
1 CTAGTTCATTAATAAAA
3023673 CT
1 CT
3023675 TACTATTAAT
Statistics
Matches: 43, Mismatches: 10, Indels: 0
0.81 0.19 0.00
Matches are distributed among these distances:
17 43 1.00
ACGTcount: A:0.39, C:0.13, G:0.07, T:0.41
Consensus pattern (17 bp):
CTAGTTCATTAATAAAA
Found at i:3027554 original size:17 final size:17
Alignment explanation
Indices: 3027516--3027586 Score: 63
Period size: 17 Copynumber: 4.2 Consensus size: 17
3027506 ATTCATGCAT
*
3027516 CTAGTTTATTAA-TAAA
1 CTAGTTCATTAATTAAA
* *
3027532 GTTAGTTTATTAATTAAA
1 -CTAGTTCATTAATTAAA
* *
3027550 CTAGTTCATTCATCAAA
1 CTAGTTCATTAATTAAA
* *
3027567 ATAGTTCATTTATTAAA
1 CTAGTTCATTAATTAAA
3027584 CTA
1 CTA
3027587 ACTCTTAATT
Statistics
Matches: 44, Mismatches: 9, Indels: 2
0.80 0.16 0.04
Matches are distributed among these distances:
17 40 0.91
18 4 0.09
ACGTcount: A:0.39, C:0.10, G:0.07, T:0.44
Consensus pattern (17 bp):
CTAGTTCATTAATTAAA
Found at i:3029133 original size:55 final size:55
Alignment explanation
Indices: 3029003--3029205 Score: 320
Period size: 55 Copynumber: 3.7 Consensus size: 55
3028993 AGTATACGTG
* * *
3029003 AAAACTAAGAAATTCATAACAAGTTTATGAATATCCGTATGGGCACTATGTGT--
1 AAAACTAAGAAATTCATAATAAGTTTATGAATTTTCGTATGGGCACTATGTGTGC
* * *
3029056 AAAACTAAGAAATTCATAATAAGTTTATGAATTTTCGTTTGGGCATTGTGTGTGC
1 AAAACTAAGAAATTCATAATAAGTTTATGAATTTTCGTATGGGCACTATGTGTGC
* *
3029111 AAAACTAAGAAATTCATAATAAGTTTATGAATTTTCATATGGGCACTATGTTTGC
1 AAAACTAAGAAATTCATAATAAGTTTATGAATTTTCGTATGGGCACTATGTGTGC
3029166 AAAACTAAGAAATTCATAATAAGTTTATGAATTTTCGTAT
1 AAAACTAAGAAATTCATAATAAGTTTATGAATTTTCGTAT
3029206 CGGTAGTGGG
Statistics
Matches: 136, Mismatches: 12, Indels: 2
0.91 0.08 0.01
Matches are distributed among these distances:
53 47 0.35
55 89 0.65
ACGTcount: A:0.38, C:0.10, G:0.16, T:0.35
Consensus pattern (55 bp):
AAAACTAAGAAATTCATAATAAGTTTATGAATTTTCGTATGGGCACTATGTGTGC
Found at i:3029154 original size:108 final size:109
Alignment explanation
Indices: 3029003--3029203 Score: 341
Period size: 108 Copynumber: 1.8 Consensus size: 109
3028993 AGTATACGTG
* *
3029003 AAAACTAAGAAATTCATAACAAGTTTATGAATATCCGTATGGGCACTATG-TGTAAAACTAAGAA
1 AAAACTAAGAAATTCATAACAAGTTTATGAATATCCATATGGGCACTATGTTGCAAAACTAAGAA
3029067 ATTCATAATAAGTTTATGAATTTTCGTTTGGGCATTGTGTGTGC
66 ATTCATAATAAGTTTATGAATTTTCGTTTGGGCATTGTGTGTGC
* * *
3029111 AAAACTAAGAAATTCATAATAAGTTTATGAATTTTCATATGGGCACTATGTTTGCAAAACTAAGA
1 AAAACTAAGAAATTCATAACAAGTTTATGAATATCCATATGGGCACTATG-TTGCAAAACTAAGA
3029176 AATTCATAATAAGTTTATGAATTTTCGT
65 AATTCATAATAAGTTTATGAATTTTCGT
3029204 ATCGGTAGTG
Statistics
Matches: 86, Mismatches: 5, Indels: 2
0.92 0.05 0.02
Matches are distributed among these distances:
108 46 0.53
110 40 0.47
ACGTcount: A:0.38, C:0.10, G:0.16, T:0.35
Consensus pattern (109 bp):
AAAACTAAGAAATTCATAACAAGTTTATGAATATCCATATGGGCACTATGTTGCAAAACTAAGAA
ATTCATAATAAGTTTATGAATTTTCGTTTGGGCATTGTGTGTGC
Found at i:3031030 original size:162 final size:163
Alignment explanation
Indices: 3030763--3031087 Score: 643
Period size: 162 Copynumber: 2.0 Consensus size: 163
3030753 TTATAACAGG
3030763 TACATTCCATCTTTTTGGTGAGTTTGTCTCTTATATTAGTACAAAGTTAGTTAAAACTAGAGGAA
1 TACATTCCATCTTTTTGGTGAGTTTGTCTCTTATATTAGTACAAAGTTAGTTAAAACTAGAGGAA
3030828 TTCCTTTAGAACTAATTTCTAGTGAAATGATAGCGGTAAACCCTATAGGTCATAGTGCAAG-GTA
66 TTCCTTTAGAACTAATTTCTAGTGAAATGATAGCGGTAAACCCTATAGGTCATAGTGCAAGTGTA
3030892 GCTCGGGTATGTAGAAAATGTCCAATTGAGATT
131 GCTCGGGTATGTAGAAAATGTCCAATTGAGATT
3030925 TACATTCCATCTTTTTGGTGAGTTTGTCTCTTATATTAGTACAAAGTTAGTTAAAACTAGAGGAA
1 TACATTCCATCTTTTTGGTGAGTTTGTCTCTTATATTAGTACAAAGTTAGTTAAAACTAGAGGAA
3030990 TTCCTTTAGAACTAATTTCTAGTGAAATGATAGCGGTAAACCCTATAGGTCATAGTGCAAGTGTA
66 TTCCTTTAGAACTAATTTCTAGTGAAATGATAGCGGTAAACCCTATAGGTCATAGTGCAAGTGTA
3031055 GCTCGGGTATGTAGAAAATGTCCAATTGAGATT
131 GCTCGGGTATGTAGAAAATGTCCAATTGAGATT
3031088 CAAGGGGTGG
Statistics
Matches: 162, Mismatches: 0, Indels: 1
0.99 0.00 0.01
Matches are distributed among these distances:
162 126 0.78
163 36 0.22
ACGTcount: A:0.31, C:0.14, G:0.20, T:0.35
Consensus pattern (163 bp):
TACATTCCATCTTTTTGGTGAGTTTGTCTCTTATATTAGTACAAAGTTAGTTAAAACTAGAGGAA
TTCCTTTAGAACTAATTTCTAGTGAAATGATAGCGGTAAACCCTATAGGTCATAGTGCAAGTGTA
GCTCGGGTATGTAGAAAATGTCCAATTGAGATT
Found at i:3032414 original size:20 final size:19
Alignment explanation
Indices: 3032373--3032421 Score: 66
Period size: 19 Copynumber: 2.6 Consensus size: 19
3032363 TAAAAAAGGG
3032373 TAAAGATAAAGAAATAAAA
1 TAAAGATAAAGAAATAAAA
3032392 TAAAGATAGAAGTAAAT-AAA
1 TAAAGATA-AAG-AAATAAAA
3032412 TAAA-ATAAAG
1 TAAAGATAAAG
3032422 GAAACAATGG
Statistics
Matches: 28, Mismatches: 0, Indels: 5
0.85 0.00 0.15
Matches are distributed among these distances:
18 3 0.11
19 11 0.39
20 10 0.36
21 4 0.14
ACGTcount: A:0.69, C:0.00, G:0.12, T:0.18
Consensus pattern (19 bp):
TAAAGATAAAGAAATAAAA
Found at i:3032447 original size:2 final size:2
Alignment explanation
Indices: 3032440--3032478 Score: 78
Period size: 2 Copynumber: 19.5 Consensus size: 2
3032430 GGTAAAAATC
3032440 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
3032479 GGTCAGGTAA
Statistics
Matches: 37, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 37 1.00
ACGTcount: A:0.51, C:0.00, G:0.00, T:0.49
Consensus pattern (2 bp):
AT
Found at i:3032657 original size:27 final size:26
Alignment explanation
Indices: 3032627--3032717 Score: 65
Period size: 28 Copynumber: 3.2 Consensus size: 26
3032617 ATAAAAAAGC
3032627 AAAAAAGACAAAAAAATTAACCAAAAT
1 AAAAAAGACAAAAAAATTAA-CAAAAT
* *
3032654 AAAACAAAACAAAACAATATATAAAATAAAT
1 AAAA-AAGACAAAA-AA-AT-TAACA-AAAT
* * *
3032685 AAAAAAGACTAAAAACATAAAACAAAAC
1 AAAAAAGAC-AAAAAAAT-TAACAAAAT
3032713 AAAAA
1 AAAAA
3032718 GAGATTAATA
Statistics
Matches: 51, Mismatches: 7, Indels: 11
0.74 0.10 0.16
Matches are distributed among these distances:
27 4 0.08
28 16 0.31
29 8 0.16
30 8 0.16
31 15 0.29
ACGTcount: A:0.76, C:0.11, G:0.02, T:0.11
Consensus pattern (26 bp):
AAAAAAGACAAAAAAATTAACAAAAT
Found at i:3033841 original size:28 final size:23
Alignment explanation
Indices: 3033788--3033845 Score: 64
Period size: 25 Copynumber: 2.4 Consensus size: 23
3033778 TTGGACCCTA
*
3033788 AAAAAATAAAAAAAAATAAAGTT
1 AAAAAATAAAAAAAAATAAAATT
3033811 AAAAAATAAAATAAATAATAATAA-T
1 AAAAAATAAAA-AAA-AATAA-AATT
*
3033836 AATAAATAAA
1 AAAAAATAAA
3033846 TAAATGTTTT
Statistics
Matches: 30, Mismatches: 2, Indels: 4
0.83 0.06 0.11
Matches are distributed among these distances:
23 11 0.37
24 3 0.10
25 15 0.50
26 1 0.03
ACGTcount: A:0.78, C:0.00, G:0.02, T:0.21
Consensus pattern (23 bp):
AAAAAATAAAAAAAAATAAAATT
Found at i:3033979 original size:26 final size:26
Alignment explanation
Indices: 3033950--3033999 Score: 64
Period size: 26 Copynumber: 1.9 Consensus size: 26
3033940 ATAATATATA
* *
3033950 TATATTTTAAAAATGTTTTTAAAAAC
1 TATATATTAAAAATATTTTTAAAAAC
* *
3033976 TATATATTATATATATTTTTAAAA
1 TATATATTAAAAATATTTTTAAAA
3034000 TGTTTTTAAA
Statistics
Matches: 20, Mismatches: 4, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
26 20 1.00
ACGTcount: A:0.46, C:0.02, G:0.02, T:0.50
Consensus pattern (26 bp):
TATATATTAAAAATATTTTTAAAAAC
Found at i:3034000 original size:37 final size:37
Alignment explanation
Indices: 3033884--3034246 Score: 398
Period size: 37 Copynumber: 9.8 Consensus size: 37
3033874 TAGTTTCAAA
* * ** *
3033884 AAAATATTTTTAAAAACTTTATATTATACGTA-TTTC
1 AAAATGTTTTTAAAAACTATATATTATATATATTTTT
* * * *
3033920 AATAACG-TTTCAAAAATTATATAATATATATATATTTTA
1 AA-AATGTTTTTAAAAACTATAT-AT-TATATATATTTTT
3033959 AAAATGTTTTTAAAAACTATATATTATATATATTTTT
1 AAAATGTTTTTAAAAACTATATATTATATATATTTTT
*
3033996 AAAATGTTTTTAAAAACTATATAATATATATATGTTTT
1 AAAATGTTTTTAAAAACTATATATTATATATAT-TTTT
* * *
3034034 CAAAATG-TTTTCAAAACTATATATTATATAAATTTTCA
1 -AAAATGTTTTTAAAAACTATATATTATATATATTTT-T
* * * *
3034072 AAAATGTTTTCAAAAAC-ATACATTATATATGTTTTC
1 AAAATGTTTTTAAAAACTATATATTATATATATTTTT
* *
3034108 AAAATGATTTTAAAAACTATATATTATATATATTTCCT
1 AAAATGTTTTTAAAAACTATATATTATATATATTT-TT
* *
3034146 AAAATG-TTTTAAAAACTATATATTATATA-GTTTTC
1 AAAATGTTTTTAAAAACTATATATTATATATATTTTT
*
3034181 AAAA-GTGTTTTAAAAACTATATATTATATACATTTTT
1 AAAATGT-TTTTAAAAACTATATATTATATATATTTTT
3034218 AAAATGTTTTTTAAAAACTATATATTATA
1 AAAATG-TTTTTAAAAACTATATATTATA
3034247 AACGTATTTT
Statistics
Matches: 277, Mismatches: 34, Indels: 30
0.81 0.10 0.09
Matches are distributed among these distances:
34 1 0.00
35 4 0.01
36 55 0.20
37 118 0.43
38 74 0.27
39 25 0.09
ACGTcount: A:0.44, C:0.06, G:0.04, T:0.45
Consensus pattern (37 bp):
AAAATGTTTTTAAAAACTATATATTATATATATTTTT
Found at i:3034154 original size:74 final size:73
Alignment explanation
Indices: 3033891--3034246 Score: 434
Period size: 73 Copynumber: 4.8 Consensus size: 73
3033881 AAAAAAATAT
* ** * * * *
3033891 TTTTAAAAACTTTATATTATACGTATTTC-AATAACG-TTTCAAAAATTATATAATATATATATA
1 TTTTAAAAACTATATATTATATATATTTCTAA-AATGTTTTTAAAAACTATAT-AT-TATATATG
*
3033954 TTTTAAAAATG
63 TTTTCAAAATG
*
3033965 TTTTTAAAAACTATATATTATATATATTTTTAAAATGTTTTTAAAAACTATATAATATATATATG
1 -TTTTAAAAACTATATATTATATATATTTCTAAAATGTTTTTAAAAACTATAT-AT-TATATATG
3034030 TTTTCAAAATG
63 TTTTCAAAATG
* * * * *
3034041 TTTTCAAAACTATATATTATATAAATTTTCAAAAATGTTTTCAAAAAC-ATACATTATATATGTT
1 TTTTAAAAACTATATATTATATATA-TTTCTAAAATGTTTTTAAAAACTATATATTATATATGTT
3034105 TTCAAAATG
65 TTCAAAATG
3034114 ATTTTAAAAACTATATATTATATATATTTCCTAAAATG-TTTTAAAAACTATATATTATATA-GT
1 -TTTTAAAAACTATATATTATATATATTT-CTAAAATGTTTTTAAAAACTATATATTATATATGT
3034177 TTTCAAAAGTG
64 TTTCAAAA-TG
* *
3034188 TTTTAAAAACTATATATTATATACATTTTTAAAATGTTTTTTAAAAACTATATATTATA
1 TTTTAAAAACTATATATTATATATATTTCTAAAATG-TTTTTAAAAACTATATATTATA
3034247 AACGTATTTT
Statistics
Matches: 250, Mismatches: 22, Indels: 19
0.86 0.08 0.07
Matches are distributed among these distances:
72 7 0.03
73 68 0.27
74 66 0.26
75 54 0.22
76 55 0.22
ACGTcount: A:0.44, C:0.06, G:0.04, T:0.46
Consensus pattern (73 bp):
TTTTAAAAACTATATATTATATATATTTCTAAAATGTTTTTAAAAACTATATATTATATATGTTT
TCAAAATG
Found at i:3035032 original size:84 final size:84
Alignment explanation
Indices: 3034899--3036039 Score: 1270
Period size: 84 Copynumber: 13.7 Consensus size: 84
3034889 TTGAATGTAA
* * * *
3034899 TCGAACTCGAAGGTCTTT-GTT-GACAGATAACCTTTCTAGCCTTAAGTTATGCTGTAAATGATA
1 TCGAACTCGAAGGTCTTTGGTTGGA-AGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATG
*
3034962 TGCCTTTGAGCTGAGCGTAG
65 TGCCTTGGAGCTGAGCGTAG
*
3034982 TCGAACTCGAAGGTCTTTGGTTGGAAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATAT
1 TCGAACTCGAAGGTCTTTGGTTGGAAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATGT
** *
3035047 GCCTTACAGCTTAGCGTAG
66 GCCTTGGAGCTGAGCGTAG
* * * * *
3035066 TCGAACTCGAAGGTCTTTTGG-TGGCAGATAGCCCTTATAGCCTTGAGCTATGCTGTAAATGATG
1 TCGAACTCGAAGGTC-TTTGGTTGGAAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATG
*
3035130 TGCCTTGGAGTTGAGCGTAG
65 TGCCTTGGAGCTGAGCGTAG
* * * * *
3035150 TCGAACTCGAAGGTCTTTGGTTGGCAGATAACCCTTTTAACCTTGAGTTATGTTACAAATGATGT
1 TCGAACTCGAAGGTCTTTGGTTGGAAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATGT
*
3035215 GCCTTGGAGCTGAGCATAG
66 GCCTTGGAGCTGAGCGTAG
* * * ** * * * *
3035234 TCAAAATCAAAGGTCTTTTATTGGCAGATAACCCTTCTCA-CCTTAAGTTATACTGCAAATGACG
1 TCGAACTCGAAGGTCTTTGGTTGGAAGATAACCCTTCT-AGCCTTGAGTTATGCTGCAAATGATG
* *
3035298 TGCCTTGGAGCTAAGCATAG
65 TGCCTTGGAGCTGAGCGTAG
* ** *
3035318 TCGAACTCGAAGGTCTTTGGTTGGAAGATAACCCTTATAGCCTTGAGTTATGCTATAAATGATAT
1 TCGAACTCGAAGGTCTTTGGTTGGAAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATGT
* *
3035383 GTCTTTGAGCTGAGCGTAG
66 GCCTTGGAGCTGAGCGTAG
* * * * *
3035402 TCGAACTCGAAGGTTTTTTGG-TGGCAGATAGCCCTTCTAGCCTTGAGCTATACTGCAAATGATG
1 TCGAACTCGAAGG-TCTTTGGTTGGAAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATG
3035466 TGCCTTGGAGCTGAGCGTAG
65 TGCCTTGGAGCTGAGCGTAG
* * *
3035486 TCAAACTCGAAGGTCTTTGGTTGGCAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATAT
1 TCGAACTCGAAGGTCTTTGGTTGGAAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATGT
*
3035551 GCCTTTGAGCTGAGCGTAG
66 GCCTTGGAGCTGAGCGTAG
* * * * * * **
3035570 TCGAACTTGAAGGTATTTTGTTGCCAA-ATAACCCTTCTTGCCTTGAATTATATTGCAAATGATG
1 TCGAACTCGAAGGTCTTTGGTTG-GAAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATG
* *
3035634 TGCATTGGAGCTGAGCATAG
65 TGCCTTGGAGCTGAGCGTAG
* * * * * *
3035654 TCGAACTCAAAGGACTTTTGG-TGGAAAATAGCCCTTCTAGCCTTGAGCTATGCTGCAAATGTTG
1 TCGAACTCGAAGGTC-TTTGGTTGGAAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATG
*
3035718 TGCCTTGGAGCTGAACGTAG
65 TGCCTTGGAGCTGAGCGTAG
* * ** * *
3035738 TCGAACTCAAAGGTCTTTAGG-TGGCAGATAGGCCTTCTAGCCTTGAGCTATGCTGTAAATGATG
1 TCGAACTCGAAGGTCTTT-GGTTGGAAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATG
* *
3035802 TGCATTGGAGCTGAGCGAAG
65 TGCCTTGGAGCTGAGCGTAG
* * *
3035822 TTGAACTCGAAGGTCTTT-GTT-GACAGATAACCCTTCTAGCCTTGAGTTATACTACAAATGATG
1 TCGAACTCGAAGGTCTTTGGTTGGA-AGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATG
* * * *
3035885 TGCCCTCGAAGCTGAGTGTAA
65 TG-CCTTGGAGCTGAGCGTAG
* * * * * *
3035906 TCAAACTCGAGGGTCTCTGG-T---AGATAACCCTTCTGGCCTTAAGCTATGCTGCAAATGATGT
1 TCGAACTCGAAGGTCTTTGGTTGGAAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATGT
*
3035967 GCCTT-GAGCTGAGAGTAG
66 GCCTTGGAGCTGAGCGTAG
* * * *
3035985 TCTAACTCGAAGGTCTTTGGCT-GACAGATAACCCTTCTCGCATTGAGTTATGCTG
1 TCGAACTCGAAGGTCTTTGGTTGGA-AGATAACCCTTCTAGCCTTGAGTTATGCTG
3036040 TCGATAGTTT
Statistics
Matches: 892, Mismatches: 146, Indels: 40
0.83 0.14 0.04
Matches are distributed among these distances:
79 27 0.03
80 4 0.00
81 36 0.04
82 2 0.00
83 97 0.11
84 706 0.79
85 20 0.02
ACGTcount: A:0.25, C:0.19, G:0.25, T:0.31
Consensus pattern (84 bp):
TCGAACTCGAAGGTCTTTGGTTGGAAGATAACCCTTCTAGCCTTGAGTTATGCTGCAAATGATGT
GCCTTGGAGCTGAGCGTAG
Found at i:3037378 original size:95 final size:95
Alignment explanation
Indices: 3037213--3037392 Score: 290
Period size: 95 Copynumber: 1.9 Consensus size: 95
3037203 TGTAAACACC
* * *
3037213 TTTATCAGGTTAGTTGAATCTTATCCATAAAGCCGGGACGTTTAACCAATTGCTCTAGAGGGACA
1 TTTATCAGGCTAGCTGAATCTTATCCATAAAGCAGGGACGTTTAACCAATTGCTCTAGAGGGACA
3037278 ACTCAAGCTTTATTGTATATTATAATCACT
66 ACTCAAGCTTTATTGTATATTATAATCACT
* *
3037308 TTTATCATGCTAGCTGAATCTTATCCATAAAGTCAGGG-CGTTTAACCAATTGCTTTAGAGGGAC
1 TTTATCAGGCTAGCTGAATCTTATCCATAAAG-CAGGGACGTTTAACCAATTGCTCTAGAGGGAC
*
3037372 AGCTCAAGCTTTATTGTATAT
65 AACTCAAGCTTTATTGTATAT
3037393 ATGTAATATT
Statistics
Matches: 78, Mismatches: 6, Indels: 2
0.91 0.07 0.02
Matches are distributed among these distances:
95 74 0.95
96 4 0.05
ACGTcount: A:0.29, C:0.18, G:0.18, T:0.35
Consensus pattern (95 bp):
TTTATCAGGCTAGCTGAATCTTATCCATAAAGCAGGGACGTTTAACCAATTGCTCTAGAGGGACA
ACTCAAGCTTTATTGTATATTATAATCACT
Found at i:3040048 original size:32 final size:32
Alignment explanation
Indices: 3040013--3040080 Score: 84
Period size: 32 Copynumber: 2.1 Consensus size: 32
3040003 AATGAAAGTG
*
3040013 AAAAAATAAATAAAAAGATAAAG-TAAGGAAAGA
1 AAAAAAT-AA-AAAAAGATAAAGATAAAGAAAGA
* *
3040046 AAAAAATAAAAAAGGGTAAAGATAAAGAAAGA
1 AAAAAATAAAAAAAGATAAAGATAAAGAAAGA
3040078 AAA
1 AAA
3040081 TAAAGATAGA
Statistics
Matches: 31, Mismatches: 3, Indels: 3
0.84 0.08 0.08
Matches are distributed among these distances:
31 10 0.32
32 14 0.45
33 7 0.23
ACGTcount: A:0.74, C:0.00, G:0.16, T:0.10
Consensus pattern (32 bp):
AAAAAATAAAAAAAGATAAAGATAAAGAAAGA
Found at i:3040384 original size:10 final size:9
Alignment explanation
Indices: 3040266--3040384 Score: 55
Period size: 9 Copynumber: 12.9 Consensus size: 9
3040256 AGAAAAATAG
3040266 AATAAAAAA
1 AATAAAAAA
**
3040275 AATAAAACT
1 AATAAAAAA
*
3040284 AA-AAAAGA
1 AATAAAAAA
*
3040292 AAGAAAAAA
1 AATAAAAAA
*
3040301 GA-AAAAAA
1 AATAAAAAA
* **
3040309 TATGAACCAA
1 AAT-AAAAAA
3040319 AATAAAACAA
1 AATAAAA-AA
3040329 AATACAATAATA
1 AATA-AA-AA-A
* *
3040341 TATAAAATA
1 AATAAAAAA
3040350 AATAAAAAA
1 AATAAAAAA
*
3040359 GAATAAAAAC
1 -AATAAAAAA
3040369 AA-AAAAAA
1 AATAAAAAA
*
3040377 AATTAAAA
1 AATAAAAA
3040385 TATATACATA
Statistics
Matches: 82, Mismatches: 19, Indels: 18
0.69 0.16 0.15
Matches are distributed among these distances:
8 20 0.24
9 31 0.38
10 21 0.26
11 5 0.06
12 5 0.06
ACGTcount: A:0.77, C:0.05, G:0.04, T:0.13
Consensus pattern (9 bp):
AATAAAAAA
Found at i:3041579 original size:37 final size:37
Alignment explanation
Indices: 3041494--3041593 Score: 139
Period size: 39 Copynumber: 2.7 Consensus size: 37
3041484 ATAAATAAAC
*
3041494 ATTTTTAAAATC-ATATAATATATATATTTTAAAAAT
1 ATTTTTAAAAACTATATAATATATATATTTTAAAAAT
* *
3041530 ATTTTGAAAAAAACTATATATTATATATATTTTAAAAAT
1 ATTTT--TAAAAACTATATAATATATATATTTTAAAAAT
*
3041569 GTTTTTAAAAACTATATAATATATA
1 ATTTTTAAAAACTATATAATATATA
3041594 AATGTTTTCA
Statistics
Matches: 55, Mismatches: 6, Indels: 5
0.83 0.09 0.08
Matches are distributed among these distances:
36 5 0.09
37 18 0.33
38 5 0.09
39 27 0.49
ACGTcount: A:0.50, C:0.03, G:0.02, T:0.45
Consensus pattern (37 bp):
ATTTTTAAAAACTATATAATATATATATTTTAAAAAT
Found at i:3041584 original size:28 final size:27
Alignment explanation
Indices: 3041553--3041632 Score: 90
Period size: 27 Copynumber: 3.0 Consensus size: 27
3041543 CTATATATTA
*
3041553 TATATATTTTAAAAATGTTTTTAAAAAC
1 TATATATTATAAAAATG-TTTTAAAAAC
* * *
3041581 TATATAATATATAAATGTTTTCAAAAC
1 TATATATTATAAAAATGTTTTAAAAAC
* *
3041608 TATATATTATATAAAT-TTTCAAAAA
1 TATATATTATAAAAATGTTTTAAAAA
3041633 TGTTTTCAAA
Statistics
Matches: 45, Mismatches: 7, Indels: 2
0.83 0.13 0.04
Matches are distributed among these distances:
26 7 0.16
27 24 0.53
28 14 0.31
ACGTcount: A:0.49, C:0.05, G:0.03, T:0.44
Consensus pattern (27 bp):
TATATATTATAAAAATGTTTTAAAAAC
Found at i:3041609 original size:27 final size:27
Alignment explanation
Indices: 3041565--3041631 Score: 93
Period size: 27 Copynumber: 2.5 Consensus size: 27
3041555 TATATTTTAA
*
3041565 AAATGTTTTTAAAAACTATATAATATAT
1 AAATG-TTTTCAAAACTATATAATATAT
*
3041593 AAATGTTTTCAAAACTATATATTATAT
1 AAATGTTTTCAAAACTATATAATATAT
3041620 AAA--TTTTCAAAA
1 AAATGTTTTCAAAA
3041632 ATGTTTTCAA
Statistics
Matches: 37, Mismatches: 2, Indels: 3
0.88 0.05 0.07
Matches are distributed among these distances:
25 9 0.24
27 23 0.62
28 5 0.14
ACGTcount: A:0.49, C:0.06, G:0.03, T:0.42
Consensus pattern (27 bp):
AAATGTTTTCAAAACTATATAATATAT
Found at i:3041636 original size:37 final size:37
Alignment explanation
Indices: 3041496--3041825 Score: 287
Period size: 37 Copynumber: 9.1 Consensus size: 37
3041486 AAATAAACAT
* * * *
3041496 TTTTAAAATC-ATATAATATATATATTTT-AAAAATA
1 TTTTAAAAACTATATATTATATAAATTTTCAAAAATG
*
3041531 TTTTGAAAAAAACTATATATTATATATATTTT-AAAAATG
1 TTTT---AAAAACTATATATTATATAAATTTTCAAAAATG
3041570 TTTTTAAAAACTATATA--ATAT--A---T---AAATG
1 -TTTTAAAAACTATATATTATATAAATTTTCAAAAATG
*
3041598 TTTTCAAAACTATATATTATATAAATTTTCAAAAATG
1 TTTTAAAAACTATATATTATATAAATTTTCAAAAATG
* * **
3041635 TTTTCAAAACTATTTATTATATACGTTTTC-AAAATG
1 TTTTAAAAACTATATATTATATAAATTTTCAAAAATG
* * *
3041671 ATTTTAAAAACTATATATTATATATATTTTCTAAAATA
1 -TTTTAAAAACTATATATTATATAAATTTTCAAAAATG
*
3041709 TTTTAAAAACTATATATTATAT-AATTTTCAAAAGTG
1 TTTTAAAAACTATATATTATATAAATTTTCAAAAATG
**
3041745 TTTTAAAAACTATATATTATATGCATTTTC-AAAATG
1 TTTTAAAAACTATATATTATATAAATTTTCAAAAATG
** *
3041781 TTTTTTAAAATTTATATATTATATACGTATTTTCAAAAACTG
1 --TTTTAAAAACTATATATTATATA--AATTTTCAAAAA-TG
3041823 TTT
1 TTT
3041826 GCAAACTATA
Statistics
Matches: 249, Mismatches: 22, Indels: 43
0.79 0.07 0.14
Matches are distributed among these distances:
27 15 0.06
28 5 0.02
29 4 0.02
30 1 0.00
31 1 0.00
33 1 0.00
34 1 0.00
35 8 0.03
36 43 0.17
37 98 0.39
38 30 0.12
39 23 0.09
40 13 0.05
41 4 0.02
42 2 0.01
ACGTcount: A:0.44, C:0.06, G:0.04, T:0.46
Consensus pattern (37 bp):
TTTTAAAAACTATATATTATATAAATTTTCAAAAATG
Found at i:3041843 original size:2 final size:2
Alignment explanation
Indices: 3041832--3041906 Score: 136
Period size: 2 Copynumber: 38.5 Consensus size: 2
3041822 GTTTGCAAAC
3041832 TA TA -A TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
3041873 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA -A TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
3041907 GGACGAAAAT
Statistics
Matches: 71, Mismatches: 0, Indels: 4
0.95 0.00 0.05
Matches are distributed among these distances:
1 2 0.03
2 69 0.97
ACGTcount: A:0.51, C:0.00, G:0.00, T:0.49
Consensus pattern (2 bp):
TA
Found at i:3046373 original size:45 final size:45
Alignment explanation
Indices: 3046311--3046569 Score: 286
Period size: 45 Copynumber: 5.7 Consensus size: 45
3046301 AATGCGCTAT
* * * *
3046311 TATGCATTTTCATTTATGGCATTCTTTCATGCCAATAAGGCACCCA
1 TATGCA-TTTCATTTATGGCATCCTTTCATGCCGATAATGCACCAA
* * * *
3046357 TATGCATTTCAATTATGACATCCTTTCGTGCCGATAATGCACCCA
1 TATGCATTTCATTTATGGCATCCTTTCATGCCGATAATGCACCAA
* * *
3046402 TGTGCATTTCATTTATGGCATCCTTTCATGTCGATAATGCACTAA
1 TATGCATTTCATTTATGGCATCCTTTCATGCCGATAATGCACCAA
*
3046447 TATGCATTTCATTTAT-GCATCCTTTCATGCCGATAATGCACTAA
1 TATGCATTTCATTTATGGCATCCTTTCATGCCGATAATGCACCAA
* * ** * * * * *
3046491 TATGCAATTCATTTATGGCATTCTTTCATGCCTTTTTTATACGCTAT
1 TATGCATTTCATTTATGGCATCCTTTCATGCC--GATAATGCACCAA
*
3046538 TATACATTTCATTTATGGCATCCTTTCATGCC
1 TATGCATTTCATTTATGGCATCCTTTCATGCC
3046570 CTTCTATATG
Statistics
Matches: 184, Mismatches: 26, Indels: 5
0.86 0.12 0.02
Matches are distributed among these distances:
44 42 0.23
45 100 0.54
46 6 0.03
47 36 0.20
ACGTcount: A:0.25, C:0.23, G:0.12, T:0.40
Consensus pattern (45 bp):
TATGCATTTCATTTATGGCATCCTTTCATGCCGATAATGCACCAA
Found at i:3046517 original size:89 final size:90
Alignment explanation
Indices: 3046299--3046522 Score: 306
Period size: 89 Copynumber: 2.5 Consensus size: 90
3046289 ATTCAATCTT
* * *
3046299 ATAATGCGCTATTATGCATTTTCATTTATGGCATTCTTTCATGCCAATAAGGCACCCATATGCAT
1 ATAATGCACTAATATGCA-TTTCATTTATGGCATTCTTTCATGCCAATAAGGCACCAATATGCAT
*
3046364 TTCAATTATGACATCCTTTCGTGCCG
65 TTCAATTATGACATCCTTTCATGCCG
** * * * * * *
3046390 ATAATGCACCCATGTGCATTTCATTTATGGCATCCTTTCATGTCGATAATGCACTAATATGCATT
1 ATAATGCACTAATATGCATTTCATTTATGGCATTCTTTCATGCCAATAAGGCACCAATATGCATT
*
3046455 TCATTTATG-CATCCTTTCATGCCG
66 TCAATTATGACATCCTTTCATGCCG
*
3046479 ATAATGCACTAATATGCAATTCATTTATGGCATTCTTTCATGCC
1 ATAATGCACTAATATGCATTTCATTTATGGCATTCTTTCATGCC
3046523 TTTTTTATAC
Statistics
Matches: 114, Mismatches: 19, Indels: 2
0.84 0.14 0.01
Matches are distributed among these distances:
89 52 0.46
90 49 0.43
91 13 0.11
ACGTcount: A:0.26, C:0.23, G:0.13, T:0.38
Consensus pattern (90 bp):
ATAATGCACTAATATGCATTTCATTTATGGCATTCTTTCATGCCAATAAGGCACCAATATGCATT
TCAATTATGACATCCTTTCATGCCG
Found at i:3046602 original size:46 final size:46
Alignment explanation
Indices: 3046406--3046686 Score: 316
Period size: 46 Copynumber: 6.2 Consensus size: 46
3046396 CACCCATGTG
* ** * * * * *
3046406 CATTTCATTTATGGCATCCTTTCATG-TCGATAATGCACTAATATG
1 CATTTCATTTATGGCATCCTTTCATGCCCTTTTATACGCTATTATA
** * * * * *
3046451 CATTTCATTTAT-GCATCCTTTCATG-CCGATAATGCACTAATATG
1 CATTTCATTTATGGCATCCTTTCATGCCCTTTTATACGCTATTATA
* * *
3046495 CAATTCATTTATGGCATTCTTTCATGCCTTTTTTATACGCTATTATA
1 CATTTCATTTATGGCATCCTTTCATGCC-CTTTTATACGCTATTATA
* * *
3046542 CATTTCATTTATGGCATCCTTTCATGCCCTTCTATATGTTATTATA
1 CATTTCATTTATGGCATCCTTTCATGCCCTTTTATACGCTATTATA
*
3046588 CATTTCATTTATGGCATTCTTTCATGCCCTTTTATACGCTATTATA
1 CATTTCATTTATGGCATCCTTTCATGCCCTTTTATACGCTATTATA
* *
3046634 CATTTCATTTATGGCATCCTTTCATGCCTTTTTATACGTTATTATA
1 CATTTCATTTATGGCATCCTTTCATGCCCTTTTATACGCTATTATA
3046680 CATTTCA
1 CATTTCA
3046687 ACTCAAGAAT
Statistics
Matches: 209, Mismatches: 24, Indels: 5
0.88 0.10 0.02
Matches are distributed among these distances:
44 42 0.20
45 24 0.11
46 107 0.51
47 36 0.17
ACGTcount: A:0.24, C:0.21, G:0.10, T:0.46
Consensus pattern (46 bp):
CATTTCATTTATGGCATCCTTTCATGCCCTTTTATACGCTATTATA
Found at i:3055145 original size:56 final size:54
Alignment explanation
Indices: 3055059--3055379 Score: 207
Period size: 54 Copynumber: 5.8 Consensus size: 54
3055049 GTGTGGTAAT
** * * *
3055059 TGCACAGAGGTGTCTGTTTAAATATTGATGCACAGAGGTGCTCAATCTTTTCTTAC
1 TGCACAGAGGTG-CCATTTATAGATTGATGCACAGAGGTGCTCAATC-TTTCTTAA
* * *
3055115 TGCACAGAGGTGCCATTTCAAAGATTGATGCACAGAGATGCTCAATCGTTTCTTTAC
1 TGCACAGAGGTGCCATTT-ATAGATTGATGCACAGAGGTGCTCAATC-TTTC-TTAA
* * * ** *
3055172 TGCACAGATGTGCCAGATTT-TAGATTGAAGTACAGAGGTGCTCAATCATCCCTAAA
1 TGCACAGAGGTGCC--ATTTATAGATTGATGCACAGAGGTGCTCAATC-TTTCTTAA
* * * * * * **
3055228 AGCACAGAGGTGCCATATACTAGATTGAAGCATATAGGTGCTCAATC-ATCCCAA
1 TGCACAGAGGTGCCATTTA-TAGATTGATGCACAGAGGTGCTCAATCTTTCTTAA
* * ** * * *
3055282 AGCACAGAGGTGCCAGATCCTAGATTGATTCACAGAGGTGCTCAATC-GTCTCAA
1 TGCACAGAGGTGCCA-TTTATAGATTGATGCACAGAGGTGCTCAATCTTTCTTAA
* * * * * *
3055336 AGCACAGAGGTGTCGTATTCTAGACTGAAGCACAGAGGTGCTCA
1 TGCACAGAGGTGCCAT-TTATAGATTGATGCACAGAGGTGCTCA
3055380 TTCATTTTTT
Statistics
Matches: 215, Mismatches: 42, Indels: 18
0.78 0.15 0.07
Matches are distributed among these distances:
54 85 0.40
55 4 0.02
56 80 0.37
57 42 0.20
59 4 0.02
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (54 bp):
TGCACAGAGGTGCCATTTATAGATTGATGCACAGAGGTGCTCAATCTTTCTTAA
Found at i:3055199 original size:57 final size:55
Alignment explanation
Indices: 3055059--3055274 Score: 191
Period size: 56 Copynumber: 3.8 Consensus size: 55
3055049 GTGTGGTAAT
** * *
3055059 TGCACAGAGGTGTCTGTTTAAATATTGATGCACAGAGGTGCTCAATCTTTTCTTAC
1 TGCACAGAGGTG-CCATTTAAAGATTGATGCACAGAGGTGCTCAATCGTTTCTTAC
*
3055115 TGCACAGAGGTGCCATTTCAAAGATTGATGCACAGAGATGCTCAATCGTTTCTTTAC
1 TGCACAGAGGTGCCATTT-AAAGATTGATGCACAGAGGTGCTCAATCGTTTC-TTAC
* * * * * ** * *
3055172 TGCACAGATGTGCCAGATTT-TAGATTGAAGTACAGAGGTGCTCAATCATCCCTAAA
1 TGCACAGAGGTGCC--ATTTAAAGATTGATGCACAGAGGTGCTCAATCGTTTCTTAC
* * * * * *
3055228 AGCACAGAGGTGCCATATACTAGATTGAAGCATATAGGTGCTCAATC
1 TGCACAGAGGTGCCATTTA-AAGATTGATGCACAGAGGTGCTCAATC
3055275 ATCCCAAAGC
Statistics
Matches: 133, Mismatches: 21, Indels: 12
0.80 0.13 0.07
Matches are distributed among these distances:
54 3 0.02
55 4 0.03
56 80 0.60
57 42 0.32
59 4 0.03
ACGTcount: A:0.30, C:0.19, G:0.22, T:0.29
Consensus pattern (55 bp):
TGCACAGAGGTGCCATTTAAAGATTGATGCACAGAGGTGCTCAATCGTTTCTTAC
Found at i:3055234 original size:28 final size:28
Alignment explanation
Indices: 3055203--3055294 Score: 79
Period size: 28 Copynumber: 3.4 Consensus size: 28
3055193 AGATTGAAGT
3055203 ACAGAGGTGCTCAATCATCCCTAAAAGC
1 ACAGAGGTGCTCAATCATCCCTAAAAGC
*
3055231 ACAGAGGTGC-C-AT-AT-ACTAGATTGAAGC
1 ACAGAGGTGCTCAATCATCCCTA-A---AAGC
* *
3055259 ATATAGGTGCTCAATCATCCC--AAAGC
1 ACAGAGGTGCTCAATCATCCCTAAAAGC
3055285 ACAGAGGTGC
1 ACAGAGGTGC
3055295 CAGATCCTAG
Statistics
Matches: 50, Mismatches: 6, Indels: 18
0.68 0.08 0.24
Matches are distributed among these distances:
24 3 0.06
25 3 0.06
26 14 0.28
27 1 0.02
28 22 0.44
29 2 0.04
30 2 0.04
31 2 0.04
32 1 0.02
ACGTcount: A:0.35, C:0.24, G:0.22, T:0.20
Consensus pattern (28 bp):
ACAGAGGTGCTCAATCATCCCTAAAAGC
Found at i:3055308 original size:54 final size:54
Alignment explanation
Indices: 3055173--3055384 Score: 255
Period size: 54 Copynumber: 3.9 Consensus size: 54
3055163 TTTCTTTACT
* * *
3055173 GCACAGATGTGCCAGATTTTAGATTGAAGTACAGAGGTGCTCAATCATCCCTAAAA
1 GCACAGAGGTGCCAGATTCTAGATTGAAGCACAGAGGTGCTCAATCATCCC--AAA
* * * *
3055229 GCACAGAGGTGCCATATACTAGATTGAAGCATATAGGTGCTCAATCATCCCAAA
1 GCACAGAGGTGCCAGATTCTAGATTGAAGCACAGAGGTGCTCAATCATCCCAAA
* ** * *
3055283 GCACAGAGGTGCCAGATCCTAGATTGATTCACAGAGGTGCTCAATCGTCTCAAA
1 GCACAGAGGTGCCAGATTCTAGATTGAAGCACAGAGGTGCTCAATCATCCCAAA
* * *
3055337 GCACAGAGGTGTC-GTATTCTAGACTGAAGCACAGAGGTGCTCATTCAT
1 GCACAGAGGTGCCAG-ATTCTAGATTGAAGCACAGAGGTGCTCAATCAT
3055385 TTTTTTTTAC
Statistics
Matches: 133, Mismatches: 22, Indels: 4
0.84 0.14 0.03
Matches are distributed among these distances:
53 1 0.01
54 88 0.66
56 44 0.33
ACGTcount: A:0.32, C:0.22, G:0.23, T:0.24
Consensus pattern (54 bp):
GCACAGAGGTGCCAGATTCTAGATTGAAGCACAGAGGTGCTCAATCATCCCAAA
Found at i:3060186 original size:18 final size:19
Alignment explanation
Indices: 3060152--3060187 Score: 56
Period size: 18 Copynumber: 1.9 Consensus size: 19
3060142 TCTTTCATTC
*
3060152 CCTTTTATTTATTTATTTA
1 CCTTTTATTTATATATTTA
3060171 CCTTTT-TTTATATATTT
1 CCTTTTATTTATATATTT
3060188 TGATAATTGA
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
18 10 0.62
19 6 0.38
ACGTcount: A:0.19, C:0.11, G:0.00, T:0.69
Consensus pattern (19 bp):
CCTTTTATTTATATATTTA
Found at i:3065234 original size:16 final size:17
Alignment explanation
Indices: 3065213--3065245 Score: 50
Period size: 17 Copynumber: 2.0 Consensus size: 17
3065203 GCAGACCACG
3065213 CGCAG-ACATTAGGTTT
1 CGCAGAACATTAGGTTT
*
3065229 CGCAGAACATTTGGTTT
1 CGCAGAACATTAGGTTT
3065246 TTAGAAGACA
Statistics
Matches: 15, Mismatches: 1, Indels: 1
0.88 0.06 0.06
Matches are distributed among these distances:
16 5 0.33
17 10 0.67
ACGTcount: A:0.24, C:0.18, G:0.24, T:0.33
Consensus pattern (17 bp):
CGCAGAACATTAGGTTT
Found at i:3065356 original size:12 final size:12
Alignment explanation
Indices: 3065339--3065366 Score: 56
Period size: 12 Copynumber: 2.3 Consensus size: 12
3065329 AAAATCATTT
3065339 AAATTTATTTTA
1 AAATTTATTTTA
3065351 AAATTTATTTTA
1 AAATTTATTTTA
3065363 AAAT
1 AAAT
3065367 ATATATTGAT
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 16 1.00
ACGTcount: A:0.46, C:0.00, G:0.00, T:0.54
Consensus pattern (12 bp):
AAATTTATTTTA
Found at i:3065384 original size:22 final size:22
Alignment explanation
Indices: 3065353--3066345 Score: 1236
Period size: 22 Copynumber: 45.6 Consensus size: 22
3065343 TTATTTTAAA
**
3065353 ATTTATTTTAAAATATATATTG
1 ATTTATTTTAAAATATGGATTG
*
3065375 ATTAATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
*
3065397 ATTTATTTTAAAATACGGATTG
1 ATTTATTTTAAAATATGGATTG
**
3065419 ATTTATTTTAAAATATGGA-AA
1 ATTTATTTTAAAATATGGATTG
* *
3065440 ATTTTATTTTAAAATCTGAATTG
1 A-TTTATTTTAAAATATGGATTG
***
3065463 ATTTATTTTAAAATATGGAAAA
1 ATTTATTTTAAAATATGGATTG
* *
3065485 ATCTATTTTAAAATATAGATTG
1 ATTTATTTTAAAATATGGATTG
3065507 ATTTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
**
3065529 ATTTATTTTAAAATATGGA-AA
1 ATTTATTTTAAAATATGGATTG
*
3065550 ATTTTATTTTAAAATATGAATTG
1 A-TTTATTTTAAAATATGGATTG
***
3065573 ATTTATTTTAAAATATGGAAAA
1 ATTTATTTTAAAATATGGATTG
3065595 ATTTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
*
3065617 ATTTATTTTAAAATATTGATTG
1 ATTTATTTTAAAATATGGATTG
***
3065639 ATTTATTTTAAAATATGGAAAA
1 ATTTATTTTAAAATATGGATTG
3065661 ATTTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
***
3065683 ATTTATTTTAAAATATGGAAAA
1 ATTTATTTTAAAATATGGATTG
*
3065705 ATTTATTTTAAAATATGAATTG
1 ATTTATTTTAAAATATGGATTG
***
3065727 ATTTATTTTAAAAT-TGGAAAC
1 ATTTATTTTAAAATATGGATTG
3065748 ATTTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
*
3065770 ATTTATTTTAAAATATGGATCG
1 ATTTATTTTAAAATATGGATTG
3065792 ATTTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
* ***
3065814 ATTTATTTTAAAATAT-AAAAC
1 ATTTATTTTAAAATATGGATTG
*
3065835 AATTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
3065857 ATTTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
*
3065879 ATTTATTTTAAAATATGGATCG
1 ATTTATTTTAAAATATGGATTG
*
3065901 ATTTATTTTAAAATATAGATTG
1 ATTTATTTTAAAATATGGATTG
** *
3065923 ATTTATTTTAAAATATAAAATG
1 ATTTATTTTAAAATATGGATTG
3065945 ATTTATTTTAAAATAT---TT-
1 ATTTATTTTAAAATATGGATTG
3065963 A--TATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
***
3065983 ATTTATTTTAAAATAT--AAAA
1 ATTTATTTTAAAATATGGATTG
** *
3066003 AAATATTTTAAAATATGAATTG
1 ATTTATTTTAAAATATGGATTG
3066025 ATTTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
* * ***
3066047 ATGTATTTTAAAATATGAAAAA
1 ATTTATTTTAAAATATGGATTG
3066069 ATTTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
* ***
3066091 ATTTATTTTAAAATATGAAAAA
1 ATTTATTTTAAAATATGGATTG
3066113 ATTTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
* * ***
3066135 GTTTATTTTAAAATATGAAAAA
1 ATTTATTTTAAAATATGGATTG
3066157 ATTTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
*
3066179 ATTTATTTTAAAATATGGATTA
1 ATTTATTTTAAAATATGGATTG
* ***
3066201 ATTTATTTTAAAATATGAAAAA
1 ATTTATTTTAAAATATGGATTG
*
3066223 ATTTATTTTAAAATATGAATTG
1 ATTTATTTTAAAATATGGATTG
***
3066245 ATTTATTTTAAAATATGGAAAA
1 ATTTATTTTAAAATATGGATTG
3066267 ATTTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
3066289 ATTTATTTTAAAATATGGATTG
1 ATTTATTTTAAAATATGGATTG
**
3066311 ATTTATTTTAAAATATAAATTG
1 ATTTATTTTAAAATATGGATTG
3066333 ATTTATTTTAAAA
1 ATTTATTTTAAAA
3066346 AATTTATTAT
Statistics
Matches: 826, Mismatches: 131, Indels: 28
0.84 0.13 0.03
Matches are distributed among these distances:
16 13 0.02
18 1 0.00
19 3 0.00
20 16 0.02
21 35 0.04
22 756 0.92
23 2 0.00
ACGTcount: A:0.43, C:0.01, G:0.10, T:0.47
Consensus pattern (22 bp):
ATTTATTTTAAAATATGGATTG
Found at i:3065964 original size:14 final size:15
Alignment explanation
Indices: 3065938--3065976 Score: 53
Period size: 16 Copynumber: 2.5 Consensus size: 15
3065928 TTTTAAAATA
3065938 TAAAATGATT-TATTT
1 TAAAAT-ATTATATTT
3065953 TAAAATATTTATATTT
1 TAAAATA-TTATATTT
3065969 TAAAATAT
1 TAAAATAT
3065977 GGATTGATTT
Statistics
Matches: 22, Mismatches: 0, Indels: 4
0.85 0.00 0.15
Matches are distributed among these distances:
14 1 0.05
15 9 0.41
16 12 0.55
ACGTcount: A:0.46, C:0.00, G:0.03, T:0.51
Consensus pattern (15 bp):
TAAAATATTATATTT
Found at i:3066426 original size:31 final size:31
Alignment explanation
Indices: 3066369--3066427 Score: 100
Period size: 31 Copynumber: 1.9 Consensus size: 31
3066359 AGTTGTATGG
*
3066369 ATTATTTAAATTTCAGTATTATAAAACTAAA
1 ATTATTTAAATTTCAGTATTACAAAACTAAA
*
3066400 ATTATTTAAATTTCAGTATTGCAAAACT
1 ATTATTTAAATTTCAGTATTACAAAACT
3066428 CTTTAAAGTT
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
31 26 1.00
ACGTcount: A:0.44, C:0.08, G:0.05, T:0.42
Consensus pattern (31 bp):
ATTATTTAAATTTCAGTATTACAAAACTAAA
Found at i:3066787 original size:18 final size:18
Alignment explanation
Indices: 3066742--3066789 Score: 53
Period size: 18 Copynumber: 2.6 Consensus size: 18
3066732 TAAAATATAT
* *
3066742 TAAATTTTTTCATTGAAAA
1 TAAA-TTTTTAATTAAAAA
3066761 T-AATATTTTAATTAAAAA
1 TAAAT-TTTTAATTAAAAA
3066779 TAAATTTTTAA
1 TAAATTTTTAA
3066790 ATACATGGAA
Statistics
Matches: 25, Mismatches: 2, Indels: 5
0.78 0.06 0.16
Matches are distributed among these distances:
17 1 0.04
18 20 0.80
19 4 0.16
ACGTcount: A:0.48, C:0.02, G:0.02, T:0.48
Consensus pattern (18 bp):
TAAATTTTTAATTAAAAA
Found at i:3067814 original size:11 final size:11
Alignment explanation
Indices: 3067792--3067827 Score: 65
Period size: 11 Copynumber: 3.4 Consensus size: 11
3067782 GTTTGATGCT
3067792 TTCTCT-TTGA
1 TTCTCTCTTGA
3067802 TTCTCTCTTGA
1 TTCTCTCTTGA
3067813 TTCTCTCTTGA
1 TTCTCTCTTGA
3067824 TTCT
1 TTCT
3067828 AATTGCTTGA
Statistics
Matches: 25, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
10 6 0.24
11 19 0.76
ACGTcount: A:0.08, C:0.25, G:0.08, T:0.58
Consensus pattern (11 bp):
TTCTCTCTTGA
Found at i:3070532 original size:20 final size:20
Alignment explanation
Indices: 3070495--3070533 Score: 51
Period size: 20 Copynumber: 1.9 Consensus size: 20
3070485 AGATTGAGTG
* * *
3070495 GATTTTGATGTTGTTTGCAC
1 GATTTTAATGATGATTGCAC
3070515 GATTTTAATGATGATTGCA
1 GATTTTAATGATGATTGCA
3070534 AGTTTAGGAG
Statistics
Matches: 16, Mismatches: 3, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
20 16 1.00
ACGTcount: A:0.23, C:0.08, G:0.23, T:0.46
Consensus pattern (20 bp):
GATTTTAATGATGATTGCAC
Found at i:3070755 original size:21 final size:23
Alignment explanation
Indices: 3070707--3070755 Score: 66
Period size: 23 Copynumber: 2.2 Consensus size: 23
3070697 ATTCCCCTGT
*
3070707 GGGGGGAATCGGTTCCCCTTCAA
1 GGGGGGAATCAGTTCCCCTTCAA
*
3070730 AGGGGGAATCAGTT-CCC-TCAA
1 GGGGGGAATCAGTTCCCCTTCAA
3070751 GGGGG
1 GGGGG
3070756 ATCGATTCCA
Statistics
Matches: 23, Mismatches: 3, Indels: 2
0.82 0.11 0.07
Matches are distributed among these distances:
21 8 0.35
22 3 0.13
23 12 0.52
ACGTcount: A:0.20, C:0.22, G:0.39, T:0.18
Consensus pattern (23 bp):
GGGGGGAATCAGTTCCCCTTCAA
Found at i:3090613 original size:42 final size:43
Alignment explanation
Indices: 3090549--3090661 Score: 140
Period size: 43 Copynumber: 2.7 Consensus size: 43
3090539 TGGGCATCTA
* * **
3090549 GATTTCAACT-CACGACGGAGGATGTCGTACCCATACA-CTGC
1 GATTTCAACTCCACGATGGAGGATATCGTACCCATACATCCAC
* *
3090590 GATTTCAACTCCACGATTGAGGATATCGTACCCCTACATCCAC
1 GATTTCAACTCCACGATGGAGGATATCGTACCCATACATCCAC
* *
3090633 GATTACAACCCCACGATGGAGGATATCGT
1 GATTTCAACTCCACGATGGAGGATATCGT
3090662 GCTATTCGAA
Statistics
Matches: 61, Mismatches: 9, Indels: 2
0.85 0.12 0.03
Matches are distributed among these distances:
41 10 0.16
42 23 0.38
43 28 0.46
ACGTcount: A:0.28, C:0.29, G:0.19, T:0.23
Consensus pattern (43 bp):
GATTTCAACTCCACGATGGAGGATATCGTACCCATACATCCAC
Found at i:3091374 original size:102 final size:103
Alignment explanation
Indices: 3090674--3091480 Score: 727
Period size: 98 Copynumber: 8.0 Consensus size: 103
3090664 TATTCGAAAT
* * *
3090674 AACACAAGTTCAACTTCACAACAAAGGGACGGCTGGTTGTCAACGAATAATTTCCCAATTTCAGA
1 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGCTGTCAAC-AA-CA-TTCCCAATTTCAGA
** * * * * * *
3090739 GCTGATTTCAACTCCACAACGGAGGATATCACGCTACCCGAGAC
63 GCCAATTTCAACTTCACAGCGAAGGATAT--TG-GACTCGAGAC
* * * *
3090783 AATACAAGCTCAACTTCACAGCG-A--G--GGCTGACTGTCAACAA-A----CAATTTC-GAAGC
1 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGCTGTCAACAACATTCCCAATTTCAG-AGC
* * *
3090837 CAATCTCAACTTCACAACAAAGGATATTGGACTCGAGAC
65 CAATTTCAACTTCACAGCGAAGGATATTGGACTCGAGAC
* *
3090876 AACACAAGTTCAACTTCACAACGAAGGGATGGCTGGTTGTCAACAACAATTTCCCAATTTCAGAG
1 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGCTGTCAACAAC-A-TTCCCAATTTCAGAG
*
3090941 CCAA-TTC-ACTTCACAGCTAAGGA-ATTGGACTC-AGAC
64 CCAATTTCAACTTCACAGCGAAGGATATTGGACTCGAGAC
* * * * * *
3090977 AGCACAAGCTCAACTTCACAGCGAAGGGGCGACTGACTGTCAACAA-A----CAATTTCAGAGCC
1 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGCTGTCAACAACATTCCCAATTTCAGAGCC
* * *
3091037 AATCTC-ACTTCACAACAAAGGATA-TGGACTCGAGAC
66 AATTTCAACTTCACAGCGAAGGATATTGGACTCGAGAC
*
3091073 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGTTGTCAACAACAATTTCCCAATTTCAGAG
1 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGCTGTCAACAAC-A-TTCCCAATTTCAGAG
* * * *
3091138 CCAATTTCAACTTCACATCTAAGAATATTGGACTCAAGAC
64 CCAATTTCAACTTCACAGCGAAGGATATTGGACTCGAGAC
* * * * * * * *
3091178 AGCACAAGCTCAACTTCACAGCGAAGGGGCGGCTGACTGTCAACAA-A----CAGTTTCGGAGTC
1 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGCTGTCAACAACATTCCCAATTTCAGAGCC
* *
3091238 AATCTCAACTTCACAGGGAAGGATATTGGACTCGAGAC
66 AATTTCAACTTCACAGCGAAGGATATTGGACTCGAGAC
* * *
3091276 AACACAAGTTCAACTTCACAACGAAGGGACGACTGGTTGTCAACAAC-TTCCCAGTTTCAGAGCC
1 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGCTGTCAACAACATTCCCAATTTCAGAGCC
* *
3091340 AATTTCAACTTCACAGTGAAGGATATTGGACTCGAGAT
66 AATTTCAACTTCACAGCGAAGGATATTGGACTCGAGAC
* * * * ** *
3091378 AGCACAAGTTCAACTTCATAGCGAAGGGACGGCTGGCTATCAACGAACAAATTTCCC-AGCTCCG
1 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGCTGTCAAC-AAC--A-TTCCCAATTTCAG
* * *
3091442 AAGCCAATTTCAACTTCACGGCGGAGGATATTGGGCTCG
62 -AGCCAATTTCAACTTCACAGCGAAGGATATTGGACTCG
3091481 GAGCAATGGA
Statistics
Matches: 574, Mismatches: 87, Indels: 76
0.78 0.12 0.10
Matches are distributed among these distances:
93 28 0.05
94 17 0.03
95 24 0.04
96 76 0.13
98 96 0.17
99 1 0.00
100 1 0.00
101 43 0.07
102 93 0.16
103 38 0.07
104 29 0.05
105 64 0.11
106 5 0.01
107 39 0.07
108 1 0.00
109 19 0.03
ACGTcount: A:0.34, C:0.25, G:0.20, T:0.21
Consensus pattern (103 bp):
AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGCTGTCAACAACATTCCCAATTTCAGAGCC
AATTTCAACTTCACAGCGAAGGATATTGGACTCGAGAC
Found at i:3091403 original size:200 final size:201
Alignment explanation
Indices: 3090674--3091432 Score: 997
Period size: 200 Copynumber: 3.8 Consensus size: 201
3090664 TATTCGAAAT
* *
3090674 AACACAAGTTCAACTTCACAACAAAGGGACGGCTGGTTGTCAACGAATAATTTCCCAATTTCAGA
1 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGTTGTCAAC-AA-CA-TTCCCAATTTCAGA
** * ** * * * * **
3090739 GCTGATTTCAACTCCACAACGGAGGATATCACGCTACCCGAGACAATACAAGCTCAACTTCACAG
63 GCCAATTTCAACTTCACAGTGAAGGATAT--TG-GACTCGAGACAGCACAAGCTCAACTTCACAG
*
3090804 CG-A---G-GGCTGACTGTCAACAAACAATTTCGAAGCCAATCTCAACTTCACAACAAAGGATAT
125 CGAAGGGGCGGCTGACTGTCAACAAACAATTTCGGAGCCAATCTCAACTTCACAACAAAGGATAT
3090864 TGGACTCGAGAC
190 TGGACTCGAGAC
*
3090876 AACACAAGTTCAACTTCACAACGAAGGGATGGCTGGTTGTCAACAACAATTTCCCAATTTCAGAG
1 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGTTGTCAACAAC-A-TTCCCAATTTCAGAG
3090941 CCAA-TTC-ACTTCACAGCT-AAGGA-ATTGGACTC-AGACAGCACAAGCTCAACTTCACAGCGA
64 CCAATTTCAACTTCACAG-TGAAGGATATTGGACTCGAGACAGCACAAGCTCAACTTCACAGCGA
* *
3091001 AGGGGCGACTGACTGTCAACAAACAATTTCAGAGCCAATCTC-ACTTCACAACAAAGGATA-TGG
128 AGGGGCGGCTGACTGTCAACAAACAATTTCGGAGCCAATCTCAACTTCACAACAAAGGATATTGG
3091064 ACTCGAGAC
193 ACTCGAGAC
3091073 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGTTGTCAACAACAATTTCCCAATTTCAGAG
1 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGTTGTCAACAAC-A-TTCCCAATTTCAGAG
* * *
3091138 CCAATTTCAACTTCACA-TCTAAGAATATTGGACTCAAGACAGCACAAGCTCAACTTCACAGCGA
64 CCAATTTCAACTTCACAGT-GAAGGATATTGGACTCGAGACAGCACAAGCTCAACTTCACAGCGA
* * ***
3091202 AGGGGCGGCTGACTGTCAACAAACAGTTTCGGAGTCAATCTCAACTTCACAGGGAAGGATATTGG
128 AGGGGCGGCTGACTGTCAACAAACAATTTCGGAGCCAATCTCAACTTCACAACAAAGGATATTGG
3091267 ACTCGAGAC
193 ACTCGAGAC
* *
3091276 AACACAAGTTCAACTTCACAACGAAGGGACGACTGGTTGTCAACAAC-TTCCCAGTTTCAGAGCC
1 AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGTTGTCAACAACATTCCCAATTTCAGAGCC
* * *
3091340 AATTTCAACTTCACAGTGAAGGATATTGGACTCGAGATAGCACAAGTTCAACTTCATAGCGAAGG
66 AATTTCAACTTCACAGTGAAGGATATTGGACTCGAGACAGCACAAGCTCAACTTCACAGCGAAGG
* * * *
3091405 GACGGCTGGCTATCAACGAACAAATTTC
131 GGCGGCTGACTGTCAACAAAC-AATTTC
3091433 CCAGCTCCGA
Statistics
Matches: 501, Mismatches: 39, Indels: 35
0.87 0.07 0.06
Matches are distributed among these distances:
194 25 0.05
195 4 0.01
196 1 0.00
197 81 0.16
198 24 0.05
199 56 0.11
200 102 0.20
201 93 0.19
202 57 0.11
203 58 0.12
ACGTcount: A:0.35, C:0.25, G:0.19, T:0.21
Consensus pattern (201 bp):
AACACAAGTTCAACTTCACAACGAAGGGACGGCTGGTTGTCAACAACATTCCCAATTTCAGAGCC
AATTTCAACTTCACAGTGAAGGATATTGGACTCGAGACAGCACAAGCTCAACTTCACAGCGAAGG
GGCGGCTGACTGTCAACAAACAATTTCGGAGCCAATCTCAACTTCACAACAAAGGATATTGGACT
CGAGAC
Found at i:3109307 original size:14 final size:12
Alignment explanation
Indices: 3109271--3109327 Score: 66
Period size: 11 Copynumber: 4.8 Consensus size: 12
3109261 TATTTTTTTC
3109271 AAAA-AAAACAA
1 AAAACAAAACAA
3109282 AAAA-AAACACAA
1 AAAACAAA-ACAA
3109294 AAAAGGCAAAACAA
1 AAAA--CAAAACAA
3109308 AAAACAAAA-AA
1 AAAACAAAACAA
3109319 AAAACAAAA
1 AAAACAAAA
3109328 ATTTCAAAAT
Statistics
Matches: 42, Mismatches: 0, Indels: 8
0.84 0.00 0.16
Matches are distributed among these distances:
11 18 0.43
12 13 0.31
14 8 0.19
15 3 0.07
ACGTcount: A:0.84, C:0.12, G:0.04, T:0.00
Consensus pattern (12 bp):
AAAACAAAACAA
Found at i:3114418 original size:20 final size:20
Alignment explanation
Indices: 3114395--3114435 Score: 82
Period size: 20 Copynumber: 2.0 Consensus size: 20
3114385 CATGGATTCC
3114395 AGAATGCAGAAATGGTATAG
1 AGAATGCAGAAATGGTATAG
3114415 AGAATGCAGAAATGGTATAG
1 AGAATGCAGAAATGGTATAG
3114435 A
1 A
3114436 TACTGAAAGG
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
20 21 1.00
ACGTcount: A:0.46, C:0.05, G:0.29, T:0.20
Consensus pattern (20 bp):
AGAATGCAGAAATGGTATAG
Found at i:3114990 original size:44 final size:44
Alignment explanation
Indices: 3114925--3115229 Score: 423
Period size: 44 Copynumber: 6.9 Consensus size: 44
3114915 TGTTACCGAA
* * *
3114925 ATAAGTGAAAATGCATAACGGTGCATTATTGGTAGAAATGTGCC
1 ATAAATGAAAATGCATAACGGTGCATTATTGGCAGAAAGGTGCC
* * * *
3114969 ATAAATAAAAATGCATAACGGTGTAATATTGGCAGAAAGGCGCC
1 ATAAATGAAAATGCATAACGGTGCATTATTGGCAGAAAGGTGCC
*
3115013 ATAAATGAGAATGCATAACGGTGCATTATTGGCAGAAAGGTGCC
1 ATAAATGAAAATGCATAACGGTGCATTATTGGCAGAAAGGTGCC
*
3115057 ATAAATGAAAATGCATAACAGTGCATTATTAGG-AGAAAGGTGCC
1 ATAAATGAAAATGCATAACGGTGCATTATT-GGCAGAAAGGTGCC
*
3115101 ATAAATGAAAATGCATAACGATGCATTATTGGCAGAAAGGTGCC
1 ATAAATGAAAATGCATAACGGTGCATTATTGGCAGAAAGGTGCC
* * * * * *
3115145 ATAAACGGAAATGCATAACTGTGGATTATTGGAAGAAAGATGCC
1 ATAAATGAAAATGCATAACGGTGCATTATTGGCAGAAAGGTGCC
* **
3115189 ATAAATGAAAATGCATAACAGTGCATTATTGTTAGAAAGGT
1 ATAAATGAAAATGCATAACGGTGCATTATTGGCAGAAAGGT
3115230 TCCACTCGTG
Statistics
Matches: 229, Mismatches: 30, Indels: 4
0.87 0.11 0.02
Matches are distributed among these distances:
43 2 0.01
44 225 0.98
45 2 0.01
ACGTcount: A:0.41, C:0.12, G:0.24, T:0.24
Consensus pattern (44 bp):
ATAAATGAAAATGCATAACGGTGCATTATTGGCAGAAAGGTGCC
Found at i:3125883 original size:110 final size:110
Alignment explanation
Indices: 3125594--3126331 Score: 367
Period size: 110 Copynumber: 6.8 Consensus size: 110
3125584 TTTCAGCGAA
* * * * * *
3125594 ATATTACCTCAAATCAGAACTTATGTAAAATTGAATG-AAAATCA-TATCTAATACAATAATAAT
1 ATATCACCTAAAATCAGAACTTATTTCAAATTGAATGAAAAAT-ATTATCCAGTACAATAATAAT
*
3125657 TTCAAATGACATAG--AATCTTAA--A-T-A--TT-ATTTTTTAGTGAT
65 TTCAAAT-A-ATAGATAATATTAACCATTCATGTTCA-TTTTTAGTGAT
* *
3125697 ATATCACCTCAAATCAGAACTTATTTCAAATTGAATGAAAAATATTATCCAGTACAATAATATTT
1 ATATCACCTAAAATCAGAACTTATTTCAAATTGAATGAAAAATATTATCCAGTACAATAATAATT
* * *
3125762 TCAATTGATAGATAATATTAACCATTCATGTTCATTTTTGGTGAT
66 TCAAATAATAGATAATATTAACCATTCATGTTCATTTTTAGTGAT
* * *
3125807 ATATCACCTAAAATCATAACTTATTTCAAATTGAATGAAAAATATTATCCGGTAGAATAATAATT
1 ATATCACCTAAAATCAGAACTTATTTCAAATTGAATGAAAAATATTATCCAGTACAATAATAATT
* * * * *
3125872 TCAAATAATAGAGAATCTT-GCTATTCGT-TTCA-----A-TGAT
66 TCAAATAATAGATAATATTAACCATTCATGTTCATTTTTAGTGAT
* * * * * * * *
3125909 ATATCACTTCAAATCAAAATTTATGTCAAATGGAATGAAACAATCA-TATCTAGTA-AAAAATAA
1 ATATCACCTAAAATCAGAACTTATTTCAAATTGAATGAAA-AAT-ATTATCCAGTACAATAATAA
* * * * * *
3125972 TTTCAATTGACATATAATCTTAACTATT-A---T--TTTTTAGTGAT
64 TTTCAAATAATAGATAATATTAACCATTCATGTTCATTTTTAGTGAT
* * * *** *
3126013 ATATCACCTCAAACCAGAACTTATTTCAAGTTGAAT-AAAAATATTATTTGGTACACCAACAATT
1 ATATCACCTAAAATCAGAACTTATTTCAAATTGAATGAAAAATATTATCCAGT--A-CAATAA--
* * ** * * * *
3126077 TTAATTGGCAAAGAAT-CTTAATTATTCA-CA-TCAT-TTTATTTTCAATGAT
61 -TAATT-TCAAATAATAGATAA-TATTAACCATTCATGTTCATTTTTAGTGAT
* * * *
3126126 ATATCA-CTATAAATCAAAACTTATTTTAAATTGAATGAAAAATCTTAT-CTGATACAATAATAA
1 ATATCACCTA-AAATCAGAACTTATTTCAAATTGAATGAAAAATATTATCCAG-TACAATAATAA
* * * * * * * * * **
3126189 TTTTAAATGACAAAAAATCTTAACTATTTACGTCCTTTTCTTTTCAGTGAT
64 TTTCAAATAATAGATAATATTAACCATTCATGT--TCAT-TTTT-AGTGAT
* * * * ***
3126240 ATATCACCTTAAATCACAACTTACTTCAAATTGAAT-AAAAATCTTATATGGTACAATAATAATT
1 ATATCACCTAAAATCAGAACTTATTTCAAATTGAATGAAAAATATTATCCAGTACAATAATAATT
* * * * *
3126304 TTAAATTATAGAGAATCTTAACTATTCA
66 TCAAATAATAGATAATATTAACCATTCA
3126332 CTTCTTTTTC
Statistics
Matches: 490, Mismatches: 97, Indels: 86
0.73 0.14 0.13
Matches are distributed among these distances:
100 1 0.00
101 1 0.00
102 74 0.15
103 54 0.11
104 69 0.14
106 5 0.01
107 9 0.02
108 14 0.03
109 18 0.04
110 96 0.20
111 7 0.01
112 6 0.01
113 88 0.18
114 46 0.09
115 2 0.00
ACGTcount: A:0.42, C:0.13, G:0.08, T:0.37
Consensus pattern (110 bp):
ATATCACCTAAAATCAGAACTTATTTCAAATTGAATGAAAAATATTATCCAGTACAATAATAATT
TCAAATAATAGATAATATTAACCATTCATGTTCATTTTTAGTGAT
Found at i:3125991 original size:102 final size:102
Alignment explanation
Indices: 3125803--3126059 Score: 232
Period size: 102 Copynumber: 2.5 Consensus size: 102
3125793 TCATTTTTGG
* * * * *
3125803 TGATATATCACCTAAAATCATAACTTATTTCAAATTGAATGAAAAATATTATCCGGTAGAATAAT
1 TGATATATCACCTAAAATCAAAACTTATGTCAAATGGAATGAAAAATATTATCCAGTAGAAAAAT
*
3125868 AATTTCAAATAATAGAGAATCTTGCTATTCGTTTCAA
66 AATTTCAAATAACAGAGAATCTTGCTATTCGTTTCAA
* * * *
3125905 TGATATATCACTTCAAATCAAAATTTATGTCAAATGGAATGAAACAATCA-TATCTAGTA-AAAA
1 TGATATATCACCTAAAATCAAAACTTATGTCAAATGGAATGAAA-AAT-ATTATCCAGTAGAAAA
* * * * * ** * *
3125968 ATAATTTCAATTGACATATAATCTTAACTATTATTTTTTAG
64 ATAATTTCAAATAACAGAGAATCTT-GCTATT-CGTTTCAA
* * * * * *
3126009 TGATATATCACCTCAAACCAGAACTTATTTCAAGTTGAAT-AAAAATATTAT
1 TGATATATCACCTAAAATCAAAACTTATGTCAAATGGAATGAAAAATATTAT
3126060 TTGGTACACC
Statistics
Matches: 124, Mismatches: 26, Indels: 10
0.77 0.16 0.06
Matches are distributed among these distances:
101 1 0.01
102 67 0.54
103 18 0.15
104 38 0.31
ACGTcount: A:0.43, C:0.13, G:0.09, T:0.36
Consensus pattern (102 bp):
TGATATATCACCTAAAATCAAAACTTATGTCAAATGGAATGAAAAATATTATCCAGTAGAAAAAT
AATTTCAAATAACAGAGAATCTTGCTATTCGTTTCAA
Found at i:3126208 original size:114 final size:113
Alignment explanation
Indices: 3126002--3126371 Score: 420
Period size: 113 Copynumber: 3.3 Consensus size: 113
3125992 TAACTATTAT
* * * * * * *
3126002 TTTTTAGTGATATATCACCTCAAACCAGAACTTATTTCAAGTTGAATAAAAATATTATTTGGTAC
1 TTTTCAGTGATATATCACCTTAAATCAAAACTTATTTCAAATTGAATAAAAATCTTATATGGTAC
** * * * * *
3126067 ACCAACAATTTTAATTGGCAAAGAATCTTAATTATTCACATCATTTTA
66 AATAATAATTTTAAATGACAAAGAATCTTAACTATTCACATCATTTTC
* * * *
3126115 TTTTCAATGATATATCA-CTATAAATCAAAACTTATTTTAAATTGAATGAAAAATCTTATCTGAT
1 TTTTCAGTGATATATCACCT-TAAATCAAAACTTATTTCAAATTGAAT-AAAAATCTTATATGGT
* * * *
3126179 ACAATAATAATTTTAAATGACAAAAAATCTTAACTATTTACGTCCTTTTC
64 ACAATAATAATTTTAAATGACAAAGAATCTTAACTATTCACATCATTTTC
* *
3126229 TTTTCAGTGATATATCACCTTAAATCACAACTTACTTCAAATTGAATAAAAATCTTATATGGTAC
1 TTTTCAGTGATATATCACCTTAAATCAAAACTTATTTCAAATTGAATAAAAATCTTATATGGTAC
* * * * *
3126294 AATAATAATTTTAAATTATAGAGAATCTTAACTATTCACTTCTTTTTC
66 AATAATAATTTTAAATGACAAAGAATCTTAACTATTCACATCATTTTC
* *
3126342 TTGTT-AGTGATATATCATCTCAAATCAAAA
1 TT-TTCAGTGATATATCACCTTAAATCAAAA
3126372 GTTGATTAAA
Statistics
Matches: 216, Mismatches: 37, Indels: 8
0.83 0.14 0.03
Matches are distributed among these distances:
112 2 0.01
113 118 0.55
114 94 0.44
115 2 0.01
ACGTcount: A:0.39, C:0.14, G:0.07, T:0.39
Consensus pattern (113 bp):
TTTTCAGTGATATATCACCTTAAATCAAAACTTATTTCAAATTGAATAAAAATCTTATATGGTAC
AATAATAATTTTAAATGACAAAGAATCTTAACTATTCACATCATTTTC
Found at i:3126332 original size:227 final size:216
Alignment explanation
Indices: 3125899--3126371 Score: 504
Period size: 227 Copynumber: 2.1 Consensus size: 216
3125889 TTGCTATTCG
*
3125899 TTTCAATGATATATCACTTCAAATCAAAATTTATGTCAAATGGAATGAAACAATCATATCTAGTA
1 TTTCAATGATATATCACTT-AAATCAAAACTTATGTCAAATGGAATGAAACAATCATATCTAGTA
* * *
3125964 AAAAATAATTTCAATTGACATATAATCTTAACTATTATTTTTTAGTGATATATCACCTCAAACCA
65 AAAAATAATTTCAAATGACAAAAAATCTTAACTATTATTTTTTAGTGATATATCACCTCAAACCA
* * * * * *
3126029 GAACTTATTTCAAGTTGAATAAAAATATTATTTGGTACACCAACAATTTTAATTGGCAAAGAATC
130 CAACTTACTTCAAATTGAATAAAAATATTATATGGTACAACAACAATTTTAATTGACAAAGAATC
*
3126094 TTAATTATTCACATCATTTTAT
195 TTAACTATTCACATCATTTTAT
* * * *
3126116 TTTCAATGATATATCACTATAAATCAAAACTTATTTTAAATTGAATGAAA-AATCTTATCT-GAT
1 TTTCAATGATATATCACT-TAAATCAAAACTTATGTCAAATGGAATGAAACAATCATATCTAG-T
* *
3126179 ACAATAATAATTTTAAATGACAAAAAATCTTAACTATTTACGTCCTTTTCTTTTCAGTGATATAT
64 A-AAAAATAATTTCAAATGACAAAAAATCTTAACTA-TTA-------TT-TTTT-AGTGATATAT
* * * * *
3126244 CACCTTAAATCACAACTTACTTCAAATTGAATAAAAATCTTATATGGTACAATAATAATTTTAAA
118 CACCTCAAACCACAACTTACTTCAAATTGAATAAAAATATTATATGGTACAACAACAATTTT-AA
* * * * *
3126309 TT-ATAGAGAATCTTAACTATTCACTTCTTTTTCT
182 TTGACAAAGAATCTTAACTATTCACATCATTTTAT
* *
3126343 TGTT-AGTGATATATCATCTCAAATCAAAA
1 T-TTCAATGATATATCA-CTTAAATCAAAA
3126372 GTTGATTAAA
Statistics
Matches: 211, Mismatches: 29, Indels: 22
0.81 0.11 0.08
Matches are distributed among these distances:
215 1 0.00
216 11 0.05
217 73 0.35
218 4 0.02
225 2 0.01
226 4 0.02
227 108 0.51
228 8 0.04
ACGTcount: A:0.41, C:0.14, G:0.07, T:0.38
Consensus pattern (216 bp):
TTTCAATGATATATCACTTAAATCAAAACTTATGTCAAATGGAATGAAACAATCATATCTAGTAA
AAAATAATTTCAAATGACAAAAAATCTTAACTATTATTTTTTAGTGATATATCACCTCAAACCAC
AACTTACTTCAAATTGAATAAAAATATTATATGGTACAACAACAATTTTAATTGACAAAGAATCT
TAACTATTCACATCATTTTAT
Found at i:3127070 original size:17 final size:17
Alignment explanation
Indices: 3127019--3127070 Score: 59
Period size: 17 Copynumber: 3.1 Consensus size: 17
3127009 GTTAAATGTT
* *
3127019 TGTAATGTATAATGCAA
1 TGTAATGTCTAATGTAA
* *
3127036 TATAATGTCTAAGGTAA
1 TGTAATGTCTAATGTAA
*
3127053 TGTAATGTCTAATATAA
1 TGTAATGTCTAATGTAA
3127070 T
1 T
3127071 ATAAGTGTTC
Statistics
Matches: 28, Mismatches: 7, Indels: 0
0.80 0.20 0.00
Matches are distributed among these distances:
17 28 1.00
ACGTcount: A:0.40, C:0.06, G:0.15, T:0.38
Consensus pattern (17 bp):
TGTAATGTCTAATGTAA
Found at i:3127778 original size:21 final size:21
Alignment explanation
Indices: 3127749--3127793 Score: 63
Period size: 21 Copynumber: 2.1 Consensus size: 21
3127739 TGTAATGCAT
*
3127749 TGTAAGAGTTAATGCTTCTAA
1 TGTAAGAGTTAATGCATCTAA
* *
3127770 TGTAGGAGTTAATGCATGTAA
1 TGTAAGAGTTAATGCATCTAA
3127791 TGT
1 TGT
3127794 TTGTTTAAAT
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
21 21 1.00
ACGTcount: A:0.31, C:0.07, G:0.24, T:0.38
Consensus pattern (21 bp):
TGTAAGAGTTAATGCATCTAA
Found at i:3128180 original size:120 final size:121
Alignment explanation
Indices: 3128033--3128269 Score: 313
Period size: 127 Copynumber: 1.9 Consensus size: 121
3128023 ATCCTTATAT
3128033 TTGTCTTTAGTCTTTTTTTTCAATTTTCCTACAATTA-TTT-TTTTATT-C-CTCTCTATAAGTC
1 TTGTCTTTAGTCTTTTTTTTCAATTTTCCTACAATTATTTTATTTTATTACTCTCTCTATAAGT-
*
3128094 A-TTTGCTATGTCAAATTTGTAAGCCTTCATATTCATGTTTCTTCTTCTTCTTCTTA
65 AGTTTGCTATGTCAAATTTGCAAGCCTTCATATTCATGTTTCTTCTTCTTCTTCTTA
* *
3128150 TTGTCTTTCGTCTTTTTTTTCTTCAATTTTCCTACAATTATTTTTATTTTTTTCACTTCTCTCTA
1 TTGTCTTTAGTC--TTTTTT-TTCAATTTTCCTACAATTA-TTTTATTTTATT-AC-TCTCTCTA
* * * *
3128215 TAAGTAGTTTGCTATGTCGAATTTGCAGGTCTTCATATTTATGTTTCTTCTTCTT
60 TAAGTAGTTTGCTATGTCAAATTTGCAAGCCTTCATATTCATGTTTCTTCTTCTT
3128270 TCTTTCTATT
Statistics
Matches: 102, Mismatches: 7, Indels: 12
0.84 0.06 0.10
Matches are distributed among these distances:
117 11 0.11
119 6 0.06
120 19 0.19
122 3 0.03
123 6 0.06
125 1 0.01
126 1 0.01
127 55 0.54
ACGTcount: A:0.17, C:0.18, G:0.08, T:0.57
Consensus pattern (121 bp):
TTGTCTTTAGTCTTTTTTTTCAATTTTCCTACAATTATTTTATTTTATTACTCTCTCTATAAGTA
GTTTGCTATGTCAAATTTGCAAGCCTTCATATTCATGTTTCTTCTTCTTCTTCTTA
Found at i:3133617 original size:18 final size:17
Alignment explanation
Indices: 3133576--3133619 Score: 54
Period size: 17 Copynumber: 2.5 Consensus size: 17
3133566 TCCAAACCCG
*
3133576 AAAACCCAAAATCAAAT
1 AAAACCCAAAAACAAAT
3133593 AAAACCCAAAACACAACAT
1 AAAACCCAAAA-ACAA-AT
3133612 -AAACCCAA
1 AAAACCCAA
3133620 CCGGTGCCCA
Statistics
Matches: 24, Mismatches: 1, Indels: 3
0.86 0.04 0.11
Matches are distributed among these distances:
17 11 0.46
18 11 0.46
19 2 0.08
ACGTcount: A:0.64, C:0.30, G:0.00, T:0.07
Consensus pattern (17 bp):
AAAACCCAAAAACAAAT
Found at i:3135301 original size:174 final size:174
Alignment explanation
Indices: 3135091--3135440 Score: 630
Period size: 174 Copynumber: 2.0 Consensus size: 174
3135081 TTTACTTTAC
*
3135091 TTAATTACCATTCATTATTTTAATATTTTCCAAATCTGTTCTCAATTTCATAAAATTAGCTATAT
1 TTAATTACCATTCATTATTTTAATATTTTCCAAATCTGTTCTCAATTACATAAAATTAGCTATAT
*
3135156 TTATTCTAACATTTTATTTTCCTTTAATTTTGTCGTTTGCTTCCTTTGACTATAT-ATTTTTTCT
66 TTATTCTAACATTTTATTTTCCTTTAATTTTGTCGTTTGCTTCCTTTGACTATATCATTTTTTCA
3135220 TTACTTAAATTTCCTTTTAAAGCATGTTGATTTACTACCCTTTG
131 TTACTTAAATTTCCTTTTAAAGCATGTTGATTTACTACCCTTTG
* *
3135264 TTAATTACCATTTATTATTTTTAATATTTTCCAAATCTGTTGTCAATTACATAAAATTAGCTATA
1 TTAATTACCATTCATTA-TTTTAATATTTTCCAAATCTGTTCTCAATTACATAAAATTAGCTATA
* *
3135329 TTTATTCTAACCTTTTATTTTCCTTTAATTTTGTCGTTTGCTTCCTTTGACTATATCCTTTTTTC
65 TTTATTCTAACATTTTATTTTCCTTTAATTTTGTCGTTTGCTTCCTTTGACTATATCATTTTTTC
3135394 ATTACTTAAATTTCCTTTTAAAGCATGTTGATTTACTACCCTTTG
130 ATTACTTAAATTTCCTTTTAAAGCATGTTGATTTACTACCCTTTG
3135439 TT
1 TT
3135441 TCTTCAATAT
Statistics
Matches: 169, Mismatches: 6, Indels: 2
0.95 0.03 0.01
Matches are distributed among these distances:
173 16 0.09
174 100 0.59
175 53 0.31
ACGTcount: A:0.25, C:0.16, G:0.06, T:0.53
Consensus pattern (174 bp):
TTAATTACCATTCATTATTTTAATATTTTCCAAATCTGTTCTCAATTACATAAAATTAGCTATAT
TTATTCTAACATTTTATTTTCCTTTAATTTTGTCGTTTGCTTCCTTTGACTATATCATTTTTTCA
TTACTTAAATTTCCTTTTAAAGCATGTTGATTTACTACCCTTTG
Found at i:3139269 original size:11 final size:11
Alignment explanation
Indices: 3139253--3139408 Score: 57
Period size: 11 Copynumber: 14.7 Consensus size: 11
3139243 CAACATAGAA
3139253 AAGAAAGAGAG
1 AAGAAAGAGAG
*
3139264 AAGAAA-AAAG
1 AAGAAAGAGAG
* *
3139274 AAAAAAAAAGAG
1 -AAGAAAGAGAG
*
3139286 AACAAA-AGAAG
1 AAGAAAGAG-AG
3139297 AAG-AAGAGAG
1 AAGAAAGAGAG
* *
3139307 ATA-TAAGAAAG
1 A-AGAAAGAGAG
*
3139318 CA-AAAGAGAG
1 AAGAAAGAGAG
*
3139328 -AGAAA-AGAA
1 AAGAAAGAGAG
*
3139337 AACAAAGAGAG
1 AAGAAAGAGAG
*
3139348 -AGAAAAGAGAA
1 AAG-AAAGAGAG
3139359 AAGAAAGAAGAG
1 AAGAAAG-AGAG
* *
3139371 AAAAAAAAGAG
1 AAGAAAGAGAG
*
3139382 AA-ACAA-AAAG
1 AAGA-AAGAGAG
3139392 AAG-AAGA-AG
1 AAGAAAGAGAG
3139401 AAGAAAGA
1 AAGAAAGA
3139409 AAACATATCA
Statistics
Matches: 111, Mismatches: 18, Indels: 33
0.69 0.11 0.20
Matches are distributed among these distances:
9 11 0.10
10 36 0.32
11 51 0.46
12 13 0.12
ACGTcount: A:0.71, C:0.03, G:0.25, T:0.01
Consensus pattern (11 bp):
AAGAAAGAGAG
Found at i:3139292 original size:22 final size:24
Alignment explanation
Indices: 3139249--3139303 Score: 69
Period size: 22 Copynumber: 2.3 Consensus size: 24
3139239 TTGACAACAT
* *
3139249 AGAAAAGAAAGAGAGAAGAAAA-A
1 AGAAAAGAAAAAGAGAACAAAAGA
3139272 AGAAAA-AAAAAGAGAACAAAAGA
1 AGAAAAGAAAAAGAGAACAAAAGA
3139295 AGAAGAAGA
1 AGAA-AAGA
3139304 GAGATATAAG
Statistics
Matches: 27, Mismatches: 2, Indels: 4
0.82 0.06 0.12
Matches are distributed among these distances:
22 13 0.48
23 11 0.41
24 2 0.07
25 1 0.04
ACGTcount: A:0.75, C:0.02, G:0.24, T:0.00
Consensus pattern (24 bp):
AGAAAAGAAAAAGAGAACAAAAGA
Found at i:3139305 original size:41 final size:41
Alignment explanation
Indices: 3139260--3139411 Score: 112
Period size: 43 Copynumber: 3.5 Consensus size: 41
3139250 GAAAAGAAAG
*
3139260 AGAGAAGAAAAAAGAAAAAAAAAGAGAACAAAAGAAGAA-GA
1 AGAGAAGAAAAAAGAAAAAAAAAGAGAA-AAAAGAAGAACAA
* * * *
3139301 AGAG-AGATATAAGAAAGCAAAAGAGAGAGAAAAGAA-AACAA
1 AGAGAAGAAAAAAGAAA--AAAAAAGAGAAAAAAGAAGAACAA
* *
3139342 AGAGAGAGAAAAGAGAAAAGAAAGAAGAGAAAAAAAAGAGAAACAA
1 AGAGA-AGAAAAAAGAAAA-AAA-AAGAGAAAAAAGA-AG-AACAA
* *
3139388 AAAGAAGAAGAAGAAGAAAGAAAA
1 AGAGAAGAA-AA-AAGAAAAAAAA
3139412 CATATCAAAC
Statistics
Matches: 85, Mismatches: 14, Indels: 20
0.71 0.12 0.17
Matches are distributed among these distances:
40 12 0.14
41 17 0.20
42 12 0.14
43 19 0.22
44 1 0.01
45 5 0.06
46 14 0.16
47 5 0.06
ACGTcount: A:0.72, C:0.03, G:0.24, T:0.01
Consensus pattern (41 bp):
AGAGAAGAAAAAAGAAAAAAAAAGAGAAAAAAGAAGAACAA
Found at i:3139324 original size:21 final size:21
Alignment explanation
Indices: 3139249--3139378 Score: 101
Period size: 20 Copynumber: 6.3 Consensus size: 21
3139239 TTGACAACAT
* *
3139249 AGAAAAGAAAGAGAGAAGAAAAA
1 AGAAAACAAA-AGAG-AGAGAAA
* *
3139272 AGAAAAAAAAAGAGA-ACAAA
1 AGAAAACAAAAGAGAGAGAAA
* * * *
3139292 AGAAGA-AGAAGAGAGATATA
1 AGAAAACAAAAGAGAGAGAAA
*
3139312 AGAAAGCAAAAGAGAGAGAAA
1 AGAAAACAAAAGAGAGAGAAA
3139333 AGAAAAC-AAAGAGAGAGAAA
1 AGAAAACAAAAGAGAGAGAAA
3139353 AGAGAAA-AGAAAGA-AGAGAAA
1 AGA-AAACA-AAAGAGAGAGAAA
3139374 A-AAAA
1 AGAAAA
3139379 GAGAAACAAA
Statistics
Matches: 90, Mismatches: 12, Indels: 14
0.78 0.10 0.12
Matches are distributed among these distances:
19 10 0.11
20 33 0.37
21 29 0.32
22 9 0.10
23 9 0.10
ACGTcount: A:0.72, C:0.02, G:0.25, T:0.02
Consensus pattern (21 bp):
AGAAAACAAAAGAGAGAGAAA
Found at i:3139373 original size:36 final size:35
Alignment explanation
Indices: 3139249--3139413 Score: 94
Period size: 36 Copynumber: 4.6 Consensus size: 35
3139239 TTGACAACAT
*
3139249 AGAAAAGAAAG-AGAGAAGAA-AAA-AGAAAAAAAA
1 AGAAAAGAAAGAAGAGAA-AACAAAGAGAAACAAAA
* * * *
3139282 AGAGAACA-AAAG-A-AGAAGA-AGAGAGATATAAGAA
1 AGA-AA-AGAAAGAAGAGAAAACAAAGAGAAACAA-AA
* * *
3139316 AGCAAAAGAGAGAGAAAAGAAAACAAAGAGAGAGAAAA
1 AG-AAAAGA-A-AGAAGAGAAAACAAAGAGAAACAAAA
*
3139354 GAGAAAAGAAAGAAGAGAAAAAAAAGAGAAACAAAA
1 -AGAAAAGAAAGAAGAGAAAACAAAGAGAAACAAAA
3139390 AGAAGAAG-AAGAAGAAAGAAAACA
1 AGAA-AAGAAAGAAG--AGAAAACA
3139414 TATCAAACAC
Statistics
Matches: 104, Mismatches: 13, Indels: 26
0.73 0.09 0.18
Matches are distributed among these distances:
32 3 0.03
33 14 0.13
34 14 0.13
35 13 0.12
36 27 0.26
37 9 0.09
38 13 0.12
39 11 0.11
ACGTcount: A:0.72, C:0.03, G:0.24, T:0.01
Consensus pattern (35 bp):
AGAAAAGAAAGAAGAGAAAACAAAGAGAAACAAAA
Found at i:3142970 original size:136 final size:136
Alignment explanation
Indices: 3142720--3143470 Score: 891
Period size: 136 Copynumber: 5.5 Consensus size: 136
3142710 ACCAATCAAC
* * * * *
3142720 ATTTCCAATAGAGAGTTCCTAATGAGAAGAAATCATCTGACAGAAGGAGAAAAAGTTCAGAATGA
1 ATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGA
* * * * * * *
3142785 GATGAACTTGTTTGACCTATTGCTAGATTCACAACACTTCGACTCAGTAACGCATCACTTAAGGG
66 GAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAATAACGCCTCGCTTGAGGG
3142850 ATTGAT
131 ATTGAT
* *
3142856 ATTTCCAATGGAGAGTTCCTAATCAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGA
1 ATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGA
* * *
3142921 GAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATTAGTAATGCCTCGCTTGAGGG
66 GAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAATAACGCCTCGCTTGAGGG
3142986 ATTGAT
131 ATTGAT
* * * *
3142992 ATTTCCAATAGAGAGTTTCTAATGAGAAGAACTCATCCGAAAGAGGGAGAAAAAGATCATAATGA
1 ATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGA
* * * * * * * *
3143057 GAAAAACATGATT-GACCTATTGCTAGATTCACAACACTTTGAATCAAAAACTCATTGCTTGAGA
66 GAAGAACTTG-TTCGACCTATTGCTAGATTCACAACACTTCGAATCAATAACGCCTCGCTTGAGG
3143121 G-TTGAAT
130 GATTG-AT
* * * *
3143128 ATTTCCAATAGAGAGTTCCTAATGATAATAACCCATCCGACAGAGGGAGAACAAGTTCATAATGA
1 ATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGA
* * * **
3143193 GAAGAACTTGTTCGACCTA-TGCTAGATTCATAAAACCTT-GAATCAACAACGCCTTTCTTGAGG
66 GAAGAACTTGTTCGACCTATTGCTAGATTCACAACA-CTTCGAATCAATAACGCCTCGCTTGAGG
* *
3143256 GATTAAC
130 GATTGAT
* * * * *
3143263 ATTTTCTAATGGATG-GTTCCTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAGTTCCTAAT
1 A-TTTCCAATAGA-GAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
* * * ** *
3143327 GAGAATAACTTGTTTGAACTATTAATCGATTCACAACACTTCGAATCAATAACGCCTCGCTTGAG
64 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAATAACGCCTCGCTTGAG
* *
3143392 GGATTAAC
129 GGATTGAT
* * * ** *
3143400 ATTTCCAATAGAGAGTTCGTAATAAGAAGAACTCATTCGACATTGGGAGAAGAAGTACATAATGA
1 ATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGA
3143465 GAAGAA
66 GAAGAA
3143471 GTTCATAATG
Statistics
Matches: 525, Mismatches: 80, Indels: 20
0.84 0.13 0.03
Matches are distributed among these distances:
135 42 0.08
136 440 0.84
137 43 0.08
ACGTcount: A:0.37, C:0.17, G:0.20, T:0.26
Consensus pattern (136 bp):
ATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGA
GAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAATAACGCCTCGCTTGAGGG
ATTGAT
Found at i:3143494 original size:20 final size:17
Alignment explanation
Indices: 3143446--3143487 Score: 75
Period size: 17 Copynumber: 2.5 Consensus size: 17
3143436 TCGACATTGG
*
3143446 GAGAAGAAGTACATAAT
1 GAGAAGAAGTTCATAAT
3143463 GAGAAGAAGTTCATAAT
1 GAGAAGAAGTTCATAAT
3143480 GAGAAGAA
1 GAGAAGAA
3143488 CTTGTTCGAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
17 24 1.00
ACGTcount: A:0.52, C:0.05, G:0.26, T:0.17
Consensus pattern (17 bp):
GAGAAGAAGTTCATAAT
Found at i:3143803 original size:136 final size:134
Alignment explanation
Indices: 3143558--3144689 Score: 911
Period size: 136 Copynumber: 8.7 Consensus size: 134
3143548 TTCGAACGCT
** *
3143558 TTCACAACACTTCGAATCAGGAACGCCTCGCTTGAGGAATTGACATTT-CAATGGAGAGTTCTAA
1 TTCACAACACTTCGAATCAATAACGCCTCGCTTGAGG-ATTGACATTTCCAATTGAGAGTTCT-A
* * * * *
3143622 ATGAGAAGAGCTCATCCGACAGAGGGAGAAAAAGTTGATAATGAGAAGAACTTATTCGA-TATAT
64 ATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACTATAT
*
3143686 CGCTCGA
129 -GCTAGA
* *
3143693 TTCACAACACTTCGAATCAGTAACGCCTCGCTTGAGGAATTGACATTTCCAATTCAGAGTTCCTA
1 TTCACAACACTTCGAATCAATAACGCCTCGCTTGAGG-ATTGACATTTCCAATTGAGAGTT-CTA
* * *
3143758 ATGAGAAGAACTTATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCAACCTAT-
64 ATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGA-CTATA
3143822 TGCTAGA
128 TGCTAGA
* * * *
3143829 TTCACAACACTTCGAATCAACAACGCCTCGCTTGAGGGTTTGACATTTCTAATGGAGAGTTCCTA
1 TTCACAACACTTCGAATCAATAACGCCTCGCTTGA-GGATTGACATTTCCAATTGAGAGTT-CTA
* * * *
3143894 ATGAGAAGAACTCGTCCGACAGAGGGAGAAGAAGTTTATAATGAGAATAACTTGTTCGACCTAT-
64 ATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGA-CTATA
**
3143958 TAATAGA
128 TGCTAGA
* * * * * * * *
3143965 TTCACAACACTTTGAATCAACAACTCATCGCTTGAGAGTTTAACATTTCCAATAGAGAGTTTTAA
1 TTCACAACACTTCGAATCAATAACGCCTCGCTTGAG-GATTGACATTTCCAATTGAGAGTTCTAA
** * * *
3144030 TTGAG-AGTTCCTAATAAAAGAACTCATTGAGAGG-G-AGAAGTT--TAAT-AGAATAACTTGTT
65 -TGAGAAG-AACTCAT--CAG-A--CA--GAG-GGAGAAGAAGTTCATAATGAGAAGAACTTGTT
3144089 CGACT-TAT-C--GA
120 CGACTATATGCTAGA
* * *
3144100 TTCACAACACTTTGAATCAATATA--CCTCG-TTGAGGGATT--TATTTCTAA-TGAGAGTT-TA
1 TTCACAACACTTCGAATCAATA-ACGCCTCGCTTGA-GGATTGACATTTCCAATTGAGAGTTCTA
* * *
3144158 AT-AGAAGAACTCAT-TGGCAGA-GG-G-AG-AGTTCATAATGAGAAGAACTTGTTTGACT-TAT
64 ATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACTATA-
3144216 TGCTAGA
128 TGCTAGA
* * * ** ** *
3144223 TTCACAATACTTTGAATCAACAATACCTCGCTTGAGGGATTTCCATTTCTAA-TGAAGAGTTC-A
1 TTCACAACACTTCGAATCAATAACGCCTCGCTTGA-GGATTGACATTTCCAATTG-AGAGTTCTA
** * *
3144286 ATGAGAAGAACTCATGTGACAGAGGGAGAAGTAGTTCATAATTAGAA-AACTTGTTCGACTAT-T
64 ATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACTATAT
3144349 GC-AGA
129 GCTAGA
* * * * *
3144354 TTCACAACACCTCGAATCAGTAACACCTCACTTG-GGATTGATATTTCC-A-TGAGAGTTCCT-A
1 TTCACAACACTTCGAATCAATAACGCCTCGCTTGAGGATTGACATTTCCAATTGAGAGTT-CTAA
* *
3144415 TGAGAA-AACTCATCAGAC--ATGG-GAAGAAGTTTATAATGAGAA-AACTT-TT-GACTAT-TG
65 TGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACTATATG
*
3144472 CAAGA
130 CTAGA
* *
3144477 TTCACAACAATTCGAATC---AACGCCT--CTTGAGGATTGACATTTCCAA-T-AGAGTTCTTAT
1 TTCACAACACTTCGAATCAATAACGCCTCGCTTGAGGATTGACATTTCCAATTGAGAGTTCTAAT
* *
3144535 GA-AA-AAC-CAT-AGACAG-GGGA-AAGAAG-TC-TAATGACAAGAAC-TGTTTGACTAT-TGC
66 GAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACTATATGC
*
3144590 TTGA
131 TAGA
** *
3144594 TTCACAACACTTCGAATCAATAACGCCTTACTTGAGGATTGACATTTCCAATTCAGAGTTCTAAT
1 TTCACAACACTTCGAATCAATAACGCCTCGCTTGAGGATTGACATTTCCAATTGAGAGTTCTAAT
*
3144659 GA-AA-AAC-CAT-ATGACAGAGGGAGAAAAAGTT
66 GAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTT
3144690 TCTAATTAGA
Statistics
Matches: 848, Mismatches: 85, Indels: 135
0.79 0.08 0.13
Matches are distributed among these distances:
115 9 0.01
116 14 0.02
117 44 0.05
118 15 0.02
119 43 0.05
120 16 0.02
121 3 0.00
122 31 0.04
123 44 0.05
124 49 0.06
125 18 0.02
126 4 0.00
127 37 0.04
128 24 0.03
129 25 0.03
130 13 0.02
131 39 0.05
132 4 0.00
133 21 0.02
134 20 0.02
135 76 0.09
136 250 0.29
137 6 0.01
138 7 0.01
139 17 0.02
140 4 0.00
141 2 0.00
142 7 0.01
143 4 0.00
144 2 0.00
ACGTcount: A:0.35, C:0.17, G:0.20, T:0.28
Consensus pattern (134 bp):
TTCACAACACTTCGAATCAATAACGCCTCGCTTGAGGATTGACATTTCCAATTGAGAGTTCTAAT
GAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACTATATGC
TAGA
Found at i:3144596 original size:117 final size:120
Alignment explanation
Indices: 3144303--3144689 Score: 378
Period size: 117 Copynumber: 3.1 Consensus size: 120
3144293 GAACTCATGT
* * * **
3144303 GACAGAGGGAGAAGTAGTTCATAATTAGAAAACTTGTTCGACTATTGC-AGATTCACAACACCTC
1 GACAG-GGGA-AAGAAGTT-ATAATGACAAAACTT-TT-GACTATTGCAAGATTCACAACAATTC
* * * * *
3144367 GAATCAGTAACACCTCACTTG-GGATTGATATTTCC-ATGAGAGTTCCTATGAGAAAACTCATCA
61 GAATCA--AACGCCTTACTTGAGGATTGACATTTCCAATCAGAGTTCTTATGA-AAAAC-CAT-A
* *
3144430 GACATGGG-AAGAAGTTTATAATGAGAAAACTTTTGACTATTGCAAGATTCACAACAATTCGAAT
1 GACAGGGGAAAGAAG-TTATAATGACAAAACTTTTGACTATTGCAAGATTCACAACAATTCGAAT
3144494 C-AACGCC-T-CTTGAGGATTGACATTTCCAAT-AGAGTTCTTATGAAAAACCATA
65 CAAACGCCTTACTTGAGGATTGACATTTCCAATCAGAGTTCTTATGAAAAACCATA
* ** *
3144546 GACAGGGGAAAGAAG-TCTAATGACAAGAACTGTTTGACTATTGCTTGATTCACAACACTTCGAA
1 GACAGGGGAAAGAAGTTATAATGACAA-AACT-TTTGACTATTGCAAGATTCACAACAATTCGAA
*
3144610 TCAATAACGCCTTACTTGAGGATTGACATTTCCAATTCAGAGTTCTAATGAAAAACCATA
64 TC-A-AACGCCTTACTTGAGGATTGACATTTCCAA-TCAGAGTTCTTATGAAAAACCATA
*
3144670 TGACAGAGGGAGAAAAAGTT
1 -GACAG-GGGA-AAGAAGTT
3144690 TCTAATTAGA
Statistics
Matches: 225, Mismatches: 17, Indels: 35
0.81 0.06 0.13
Matches are distributed among these distances:
115 9 0.04
116 12 0.05
117 40 0.18
118 9 0.04
119 25 0.11
120 13 0.06
121 1 0.00
122 30 0.13
123 22 0.10
124 40 0.18
125 7 0.03
126 7 0.03
127 9 0.04
128 1 0.00
ACGTcount: A:0.37, C:0.18, G:0.19, T:0.27
Consensus pattern (120 bp):
GACAGGGGAAAGAAGTTATAATGACAAAACTTTTGACTATTGCAAGATTCACAACAATTCGAATC
AAACGCCTTACTTGAGGATTGACATTTCCAATCAGAGTTCTTATGAAAAACCATA
Found at i:3144810 original size:108 final size:106
Alignment explanation
Indices: 3144592--3144887 Score: 362
Period size: 108 Copynumber: 2.8 Consensus size: 106
3144582 ACTATTGCTT
* * * **
3144592 GATTCACAACACTTCGAATCAATAACGCCTTACTTGA-GGATTGACATTTCCAATTCAGAGTTCT
1 GATTCACAATACTTCGAATCAACAAAGCC-T-CTTGAGGGATTG-CATTT-CAATGGAGAGTTCT
* *
3144656 AATGA-AAAACCATATGACAGAGGGAGAAAAAGTTTCTAATTAGA
62 AATGAGAGAACCATCTGACAGAGGGAGAAAAAGTTTCTAATTAGA
3144700 GATTCACAATACTTCGAATCAACAAAGCCTCGCTTGAGGGATTGCATTTCAATGGAGAGTTTCTA
1 GATTCACAATACTTCGAATCAACAAAGCCT--CTTGAGGGATTGCATTTCAATGGAGAG-TTCTA
*
3144765 ATGAGAGAACTCATCCGACAGAGGGAGAAAAAGTTTCT-ATT-GA
63 ATGAGAGAAC-CATCTGACAGAGGGAGAAAAAGTTTCTAATTAGA
*
3144808 GATTCACAATACTTC-AATGAAC--A-CCTCTTGAGGGATTGCATTTC-ATGGAGAGTTCTAAT-
1 GATTCACAATACTTCGAATCAACAAAGCCTCTTGAGGGATTGCATTTCAATGGAGAGTTCTAATG
3144867 -GAGAACCATCTGACAGAGGGA
66 AGAGAACCATCTGACAGAGGGA
3144888 AGAGTCATAA
Statistics
Matches: 172, Mismatches: 11, Indels: 21
0.84 0.05 0.10
Matches are distributed among these distances:
97 14 0.08
98 6 0.03
100 7 0.04
101 8 0.05
102 18 0.10
104 3 0.02
105 1 0.01
107 15 0.09
108 62 0.36
109 13 0.08
110 25 0.15
ACGTcount: A:0.35, C:0.18, G:0.20, T:0.26
Consensus pattern (106 bp):
GATTCACAATACTTCGAATCAACAAAGCCTCTTGAGGGATTGCATTTCAATGGAGAGTTCTAATG
AGAGAACCATCTGACAGAGGGAGAAAAAGTTTCTAATTAGA
Found at i:3145038 original size:125 final size:125
Alignment explanation
Indices: 3144827--3145311 Score: 501
Period size: 125 Copynumber: 3.9 Consensus size: 125
3144817 TACTTCAATG
*
3144827 AACACCT--CTTGAGGGATTGCATTTCATGGAGAGTT-CTAAT--G-AGAACCATCTGACAGAGG
1 AACACCTCACTTGAGGGATTGCATTTCATTGAGAGTTCCTAATGAGAAGAACCATCTGACAG-GG
*
3144886 GAAG-AG-TCATAATGAGAAGAACTTG-TCGACCTATTGCTAGATTCACAACACTAAATTAGT
65 GAAGAAGTTCAT-ATGAGAAG-ACTTGTTCGACCTATTGCTAGATTCACAACACTAAATTAGC
*
3144946 AACACCTCACTTGA-GGATTGACATTTCCATTGAGAGTTCCTAATGAGAA-AACCATCCGACAGG
1 AACACCTCACTTGAGGGATTG-CATTT-CATTGAGAGTTCCTAATGAGAAGAACCATCTGACAGG
*
3145009 GGAAGAAGTTCATAATGAGAAGAAC-TG-TCGACCTATTGCTAGATTCACAACA-AATAATTAGC
64 GGAAGAAGTTCAT-ATGAGAAG-ACTTGTTCGACCTATTGCTAGATTCACAACACTA-AATTAGC
* * * * *
3145071 AACGCCTCACTTGA-GGATTG-ATTTTAAT-AGAGTTCCTAATGCGAAGAACCA--T-ATAGGGA
1 AACACCTCACTTGAGGGATTGCATTTCATTGAGAGTTCCTAATGAGAAGAACCATCTGACAGGG-
* * * *
3145130 GAAGAAGTTCATATGAGAAGAC-TGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGC
65 GAAGAAGTTCATATGAGAAGACTTGTTCGACCTATTGCTAGATTCACAACAC-T-AAATTAGC
* * * *
3145192 AACGCCTCACTTGAGGGATTGATATTTCCAATTCAGAGTTCCTAATGA-AAGAACCATATGACAG
1 AACACCTCACTTGAGGGATTG-CATTT-C-ATTGAGAGTTCCTAATGAGAAGAACCATCTGACAG
* * *
3145256 AGGATAAAAGTTCATATGAGAAGACTTGTTTGACCTATTGCTAGATTCACAACACT
63 GGGA-AGAAGTTCATATGAGAAGACTTGTTCGACCTATTGCTAGATTCACAACACT
3145312 TGAATCAGTA
Statistics
Matches: 314, Mismatches: 24, Indels: 46
0.82 0.06 0.12
Matches are distributed among these distances:
118 4 0.01
119 43 0.14
120 18 0.06
121 46 0.15
122 23 0.07
123 9 0.03
124 11 0.04
125 67 0.21
126 27 0.09
127 13 0.04
128 3 0.01
129 24 0.08
130 26 0.08
ACGTcount: A:0.35, C:0.19, G:0.20, T:0.27
Consensus pattern (125 bp):
AACACCTCACTTGAGGGATTGCATTTCATTGAGAGTTCCTAATGAGAAGAACCATCTGACAGGGG
AAGAAGTTCATATGAGAAGACTTGTTCGACCTATTGCTAGATTCACAACACTAAATTAGC
Found at i:3145629 original size:136 final size:136
Alignment explanation
Indices: 3145362--3164023 Score: 19957
Period size: 136 Copynumber: 138.1 Consensus size: 136
3145352 ATTTCTGAAT
* * * * * *
3145362 AACTTGTTCGACCTATTACTAGATTCATAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3145427 ACATTTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3145492 TGAGAAT
130 TGAGAAG
* ** * **
3145499 AACATGTTCGACCTATTAATCGAATT-ACAACACTTCGAATCAATAACGCCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
* * * * * *
3145563 AACATTTCCAATGGAGAGTAT-GTAATAAGAAGAACTCATCCGATAGAGGGAGAAGATGTTAATA
65 GACATTTCCAATGGAGAGT-TCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATA
3145627 ATGAGAAG
129 ATGAGAAG
* * ** * **
3145635 AAATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3145700 CCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCAAAAGAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3145765 GTGAAG
131 GAGAAG
** *
3145771 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAATAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * *
3145836 ACATCTCCAATGGAGAGTTTCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3145901 GAGAAG
131 GAGAAG
* * * * ** ** * *
3145907 AACTTGTTCAACCTATTGCTAGATTCACAACACTTTGATTCAACAACGAATTGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3145972 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCTACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3146036 GAGAAT
131 GAGAAG
* * * ** * *
3146042 AACTTGTTTGACCTATTGCTAGATTCATAAAACTTTAAATCAGCAATGCCTCACATGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3146107 ACATTTTCTAATGGAAAGTTCTTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
* *
3146172 TGAGGAT
130 TGAGAAG
** * ** * * *
3146179 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAATAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * ** *
3146244 AAATTTCCAATGGAGAGTTCGC-AATAAGAAGAACTCATATGACAAAGGGAGAAGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTC-CTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3146308 TGAGAAG
130 TGAGAAG
* * ** * *
3146315 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAATAATGCCTTACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * *
3146380 CCATATT-CAATGGAGAGTTTCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTTCATAA
66 ACAT-TTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3146444 TGAGAAG
130 TGAGAAG
* * * * ** * * *
3146451 AACTTGTTCAACCTATTGCTAGATTCACAACACTTTGAATCAACAATGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3146516 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3146580 GAGAAT
131 GAGAAG
* * ** *
3146586 AACTTGTTCGACCTATTGCTAGATTCATAAAACTTTAAATCAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3146651 ACATTTTCTAATGGAAAGTTCTTAATGAGAAGAACTCATCTGACAGAGGGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3146716 TGAGAAT
130 TGAGAAG
** * ** * * *
3146723 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAATAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* ** *
3146788 ACATTTCCAATGGAGAGTTCGC-AATAAGAAGAACTCATATGACAAAGGGAGAAGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTC-CTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3146852 TGAGAAG
130 TGAGAAG
* * * * **
3146859 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3146924 CCATATT-CAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAAAGGGAGAAGTAGTTCATAA
66 ACAT-TTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3146988 TGAGAAG
130 TGAGAAG
* * * * *
3146995 AACTTGTTCGACCTATTTCTAGATTCACAACAGTTCAAATTAGTAA-GACCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACG-CCTCACTTGAGGGATT
* *
3147059 GACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3147124 TGAGAAT
130 TGAGAAG
* * ** * * * * *
3147131 AACTTG-TCAAACTATTGCTAGATTCACAACAAATCAAATTAGTAATGCCTCACTTGAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3147195 ACATTTCCAATAGAGAGTTCCTAATGAGAAGAGCTCATCAGATAGGGGGAGAAGAATTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3147260 GAGAAG
131 GAGAAG
* * * *
3147266 AACTTGTTCGACCTATTGCTTGATACACAATACTTCGAATTAGCAACG-CTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
** * ** * * *
3147330 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3147394 TGAGAAG
130 TGAGAAG
* * * * *
3147401 GACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATCAGCAATGCCTCGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
*
3147466 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3147531 GAGAAG
131 GAGAAG
* * * * ** * * *
3147537 AACTTGTTCAACCTATTGCTAGATTCATAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3147602 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3147666 GAGAAT
131 GAGAAG
* * * *
3147672 AACTTGTTCGACCTATTTCTAGATTCATAAAACTTTGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3147737 ACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCGACAGAGAGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3147802 TGAGAAT
130 TGAGAAG
** * * * * *
3147809 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAACAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* ** *
3147874 ACATTTCCAATGGAGAGTTCGC-AATAAGAAGAACTCATATGACAAAGGGAGAAGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTC-CTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3147938 TGAGAAG
130 TGAGAAG
* * * * **
3147945 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3148010 CCATATT-CAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAAAGGGAGAAGTAGTTCATAA
66 ACAT-TTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3148074 TGAGAAG
130 TGAGAAG
* * * * *
3148081 AACTTGTTCGACCTATTTCTAGATTCACAACAGTTCAAATTAGTAA-GACCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACG-CCTCACTTGAGGGATT
* *
3148145 GACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3148210 TGAGAAT
130 TGAGAAG
* * ** * * * * *
3148217 AACTTG-TCAAACTATTGCTAGATTCACAACAAATCAAATTAGTAATGCCTCACTTGAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3148281 ACATTTCCAATAGAGAGTTCCTAATGAGAAGAGCTCATCAGATAGGGGGAGAAGAATTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3148346 GAGAAG
131 GAGAAG
* * * *
3148352 AACTTGTTCGACCTATTGCTTGATACACAATACTTCGAATTAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
** * ** * * *
3148417 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3148481 TGAGAAG
130 TGAGAAG
* * * *
3148488 GACTTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* *
3148553 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTTTATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3148618 GAGAAG
131 GAGAAG
* * * * * * * ** * *
3148624 AACTTGTTCAACCTATTACTATATTCATAATACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * ** * *
3148689 ACATTTCTAATAGAGAGTTTGTAATGAGAA-AACTTATCCGACAGAGGGAGAAAAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3148753 GAGAAT
131 GAGAAG
** * * * * * * **
3148759 AACTTGTTCGGTCGATTACTAGATTCACAAAACTTTGAATTAGTAATACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3148824 ACATTTTCTAATAGAGAGTTACTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3148889 CGAG-AG
130 TGAGAAG
* * * ** * *
3148895 TAACATATTCAACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
1 -AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGAT
* * * * * *
3148959 TGGCATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGCGAGAAGAAGTTAATA
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATA
3149024 ATGAGAAG
129 ATGAGAAG
* * * ** * **
3149032 AAATTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3149097 CCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-AGTTCATAA
*
3149161 TGTGAAG
130 TGAGAAG
* * *
3149168 AAATTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* *
3149233 ACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3149298 GAGAAG
131 GAGAAG
* ** * * * * * * *
3149304 AACTTCTTCGAGTTATTGCTAGATTTACAACAATTCTAATTAGCAACGCCTCGCTTTA-GGAAT-
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3149367 ACATTTCCAATAGAGAGTTCCTAATAAGAAGAACTTATCAGACAGGGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3149432 GAGAAG
131 GAGAAG
* * * * *
3149438 AACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAATCAACAACGCCTCTCTTAAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
** * * * ** * * *
3149502 GACATTTCCAATTCAGAGTTCTTAATGAAAAGAACCCATATGGCAGAGGAAGAAGAAGTTCTTAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3149567 TGAGAAG
130 TGAGAAG
* * * * *** **
3149574 AACTTGTTCGACCTATTTCTAGATTCACAATACTTCGAATGAACAATTTCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3149639 CCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAGAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3149704 GAGAAG
131 GAGAAG
* * * * *
3149710 AACTTGTTCGACCTATTGTTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * *
3149775 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3149840 GAGAAG
131 GAGAAG
* * * ** * * * * *
3149846 AAATT-TTTGACCAATTGCTAGATTCACAACAAATCAAATTAGCAACGCCTCGCATGAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * * *
3149910 ACATTTCTAATAGAGAGTTCCAAATGAGAAGAACTCATCAGATAGGGGGAGAAGAAGTTCATTAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3149975 GAGAAG
131 GAGAAG
* *
3149981 AACTTGTTCGACCTATTGCTTGATTCACAAAACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
** * * ** * * *
3150046 ACA-TTCCAAATTCAGAGTTCCAAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCATA
66 ACATTTCC-AATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATA
3150109 ATGAGAATG
129 ATGAGAA-G
* * * * *
3150118 -ATTTGTTTGACCTATTACTAGATTCACAACAATTCGAATCAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3150182 ACATTTCCAATGGAGAGTTCGTAATGAGAAGAACTCATCCGATAGAGGGACAAAAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3150247 GAGAAG
131 GAGAAG
* * * * * * ** * * *
3150253 AACTTGTTCAAGCTATTACTAGATTCATAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * * * * *
3150318 ATATTTCCAATAGAGAGTTTCGAACGTGAA-AACTCATTCGACAGAGAGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3150382 GAGAAT
131 GAGAAG
* * * * * *
3150388 AACTTGTTCGACCTATTTCTAGATTCATAAAACTTTGAATCAGCGATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3150453 ATATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCGACAGAGGGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3150518 TGAGAAT
130 TGAGAAG
** * * * * *
3150525 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAACAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * ** *
3150590 ACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATATGACAGAGGGAGACGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3150655 GAGAAG
131 GAGAAG
* * * * **
3150661 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * * * * * *
3150726 CCATTTTCAATGGAGAGTTTCTAATTAGAGGAACGCATCTGACAGAGGAAGAAGTAGCTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3150791 GAGAAG
131 GAGAAG
* * * * *
3150797 AACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3150862 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACCCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3150927 GAGAAG
131 GAGAAG
* * ** ** * * *
3150933 AACTTG-TCGACCTATTGCTAAATTCACAATAAATAAAATTAGCAACGCCTCACTTGAGGAATTT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* ** * * * *
3150997 ACATTTCTAATAAAGAGTTCCTAATGCGAAGAACTCATCAGATAGGGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3151062 GAGAAG
131 GAGAAG
* *
3151068 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
** * ** * * *
3151133 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGATAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3151197 TGAGAAG
130 TGAGAAG
* * * * * *
3151204 GACCTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAGTAATGCCTCGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* *
3151269 ATATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGATAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3151334 GAGAAG
131 GAGAAG
* * * * **
3151340 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * * * *
3151405 CCATTTTCAATGGAGATTTTCTAATGAGAAGAACGCATCTGACAAAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3151470 GAGAAG
131 GAGAAG
* * * *
3151476 AACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAA-GACCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACG-CCTCACTTGAGGGATT
* * *
3151540 GACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAAAAGTTCATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3151605 TGAGAAG
130 TGAGAAG
* * ** * * * *
3151612 AACTTG-TCAAACTATTGCTAGATTCACAACAAATCAAATTAGTAACGCCTCACTTGAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* ** * * *
3151676 ACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCAAATAG-GGGGGAAAGAATTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAG-AAGAAGTTCATAA
3151740 TGAG-AG
130 TGAGAAG
*
3151746 AACTTGTTCGACCTATTGCT-GATTCACAATACTTCGAATCAGCAACG-C-CACTTGA-GGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* ** * ** * * *
3151807 ATATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3151871 TGAGAAG
130 TGAGAAG
* * * * *
3151878 GACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATCAGCAATGCCTCGCTT-AGGGA-TG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* *
3151941 ACATTTCCAAT-G-GAG-TCCTAATGAG-A-AACTCA--CGACAGAGGGAGAAAAAGTTTATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3151999 GAGAAG
131 GAGAAG
* * * * * ** * *
3152005 AACTTGTTCAACCTATTACTAGATTCACAATACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * ** * * *
3152070 ACATTTCTAATAGAGAGTTTGTAATGAGAA-AACTTATCCGACAGAGAGAGAAGAAGTTTATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3152134 GAGAAT
131 GAGAAG
* * * * * * *
3152140 AACTTGTTTG-GCTGATTACTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATT
1 AACTTGTTCGACCT-ATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
* * * * *
3152204 GACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAGTTCCTA
65 GACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATA
*
3152269 ACGAG-AG
129 ATGAGAAG
* * ** * *
3152276 TAACATATTCGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
1 -AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGAT
* * * * *
3152340 TGGCATTTCCAATTGAGAGTTCGTAATAAGAAG-ACTCAT-C-A-ATGA--GA-AA-AA-CTCAT
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA-GAGGGAGAAGAAGTTCAT
*
3152396 CCGACA-GACGGAG
128 ---A-ATGA-GAAG
* * * **
3152409 AA---GTTTGACCTATT-CTAGA-TCACAACACTTCGAATCA-AATAAGCCTTGCTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCA-ACGCCTCACTTGAGGGATT
* * * * *
3152468 GCCATTTCCAATGGAGAGTTTCTAATGATAATAACTCATCCGAAAGAGGGAGAA-ATAGTTCATA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-AGTTCATA
*
3152532 ATGTGAAG
129 ATGAGAAG
* *
3152540 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* *
3152605 ACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3152670 GAGAAG
131 GAGAAG
* ** * * * * * * * *
3152676 AACTTCTTCGAGTTATTGCTAGATTTACAACAATTCTAATTAGCAATGCCTCGCTTTAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3152741 ACATTTCCAATAGAGAGTTCCTAATAAGAAGAACTTATCAGACAGGGGGAGAAGAAGTTAATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3152806 GAGAAG
131 GAGAAG
* * * * * **
3152812 AACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAAATTCA-CAACACATCGA-ATCA-AC
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCG-AA-TCAGCAACGCCTC-ACTTGAGGG
** * * * * * * ** *
3152873 AACG-CCTCT-C-TTGAGAGATGTTCTTAATGAAAAGAACCCATATGACAGAGGAAGAAGAAGTT
62 ATTGACATTTCCAATG-GAGA-GTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
**
3152935 TTTAATGAGAAG
125 CATAATGAGAAG
* * * *** **
3152947 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATTTCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3153012 CCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGT-ATCTGACAGAGGGAGAAGTAGTTTCATA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAAC-TCATCCGACAGAGGGAGAAGAAG-TTCATA
3153076 ATGAGAAG
129 ATGAGAAG
* * * * * *
3153084 AACTTGTTCGACCTATTGTTAGATTCACAACACCTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3153149 ACATTTCCATTGGAGAGTTCCTAATGGGAAAAACCCATCCGACAAATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3153214 GAGAAG
131 GAGAAG
** ** * *
3153220 AACTTG-TCGACCTATTGCTAGATTCACAACAAATAAAATTAGCAACGCCTCACTTGAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3153284 GCATTTCTAATAGAGAGTTCCTAATGCGAAGAACTCATCAC-ATAGGGGGAGAAGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATC-CGACAGAGGGAGAAGAAGTTCATAA
3153348 TGAGAAG
130 TGAGAAG
* *
3153355 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
** * ** * * *
3153420 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3153484 TGAGAA-
130 TGAGAAG
* * * *
3153490 AGACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATCAGCAATGCCTCGCTTGAGGGATT
1 A-ACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
*
3153555 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTTCATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3153620 TGCGAAG
130 TGAGAAG
* * * * ** * *
3153627 AACTTGTTCAACCTATTACTAGATTCACAACACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3153692 ATATTTCTAATAGAGAGTTCGTAATGAGAA-AACTTATCCGACAGAGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3153756 GAGAAT
131 GAGAAG
* * * * * *
3153762 AACTTGTTCGACCTATTACTAGATTCATAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3153827 ACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGACAGAGGGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3153892 TGAGAAT
130 TGAGAAG
* * ** * **
3153899 AACATGTTTGACCTATTAATCGAATT-ACAACACTTCGAATCAATAACGCCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
* * * * *
3153963 AACATTTCCAATGTAGAGTTCGTAATTAAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTAATA
65 GACATTTCCAATGGAGAGTTCCTAA-TGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATA
3154028 ATGAGAAG
129 ATGAGAAG
* * ** * **
3154036 AAATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3154101 CCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3154166 GTGAAG
131 GAGAAG
* *
3154172 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * *
3154237 ACATCTCCAATGGAGAGTTTCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3154302 GAGAAG
131 GAGAAG
* * * ** * * *
3154308 AACTTGTTCAACCTATTGCTAGATTCACAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3154373 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCTACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3154437 GAGAAT
131 GAGAAG
* * * ** *
3154443 AACTTGTTTGACCTATTGCTAGATTCATAAAACTTTAAATCAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3154508 ACATTTTCTAATGGAAAGTTCTTAATGAGAAGAACTCATCCAACAGAGGGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
* *
3154573 TGAGGAT
130 TGAGAAG
** * ** * * *
3154580 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAATAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* ** *
3154645 ACATTTCCAATGGAGAGTTCGC-AATAAGAAGAACTCATATGACAAAGGGAGAAGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTC-CTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3154709 TGAGAAG
130 TGAGAAG
* * * * * **
3154716 AACTTGTTCAACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * * * *
3154781 CCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGAAAAAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3154846 GAGAAG
131 GAGAAG
* * * *
3154852 AACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAA-GACCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACG-CCTCACTTGAGGGATT
* *
3154916 GA-ATTTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATA
65 GACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATA
3154980 ATGAGAAG
129 ATGAGAAG
* * ** * * * *
3154988 AACTTG-TCAAACTATTGCTAGATTCACAACAAATCAAATTAGTAACGCCTCACTTGAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3155052 ACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCAGATAGGGGGAGAAGAATTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3155117 GAGAAG
131 GAGAAG
* * *
3155123 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGTTTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
** * ** * * *
3155188 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3155252 TGAGAA-
130 TGAGAAG
* * * *
3155258 AGACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATCAGCAATGCCTCGCTTGAGGGATT
1 A-ACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
* *
3155323 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTTTATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3155388 TGAGAAG
130 TGAGAAG
* * * * * * ** * *
3155395 AACTTGTTCAATCTATTACTAGATTCACAATACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * ** *
3155460 ACATTTCTAATAGAGAGTTTGTAATGAGAA-AACTTATCCGACAGAGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3155524 GAGAAT
131 GAGAAG
* * * * * *
3155530 AACTTGTTCG-GCTGATTACTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATT
1 AACTTGTTCGACCT-ATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
* * * * *
3155594 GACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAGTTCCTA
65 GACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATA
*
3155659 ACGAG-AG
129 ATGAGAAG
* * ** * *
3155666 TAACATATTCGACCTATTAATCGAATT-AC-A-A---C-AATCAACAACGCCTCACTTGAGGGAT
1 -AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGAT
* * * * * *
3155724 TGGCATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGCGAGAAGAAGTTAATA
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATA
3155789 ATGAGAAG
129 ATGAGAAG
* * * ** * **
3155797 AAATTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3155862 CCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-AGTTCATAA
*
3155926 TGTGAAG
130 TGAGAAG
* *
3155933 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACCTCAATTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* *
3155998 ACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3156063 GAGAAG
131 GAGAAG
* ** * * * * * * * * *
3156069 AACTTCTTCGAGTTATTGTTAGATTTACAACAATTCTAATTAGCAATGCCTCGCTTTAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3156134 ACATTTCCAATAGAGAGTTTCTAATAAGAAGAACTTATCAGACAGGGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3156199 GAGAAG
131 GAGAAG
* * * *
3156205 AACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAATCAACAACGCCTCTCTTGAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
** * * * ** * * *
3156269 GACATTTCCAATTCAGAGTTCTTAATGAAAAGAACCCATATGATAGAGGAAGAAGAAGTTCTTAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3156334 TGAGAAG
130 TGAGAAG
* * *** **
3156341 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAGCAATTTCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3156406 CCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAGAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3156471 GAGAAG
131 GAGAAG
* * * * * *
3156477 AACTTGTTCGACCTATTGTTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGAATG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * *
3156542 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3156607 GAGAAG
131 GAGAAG
* * ** * * * * *
3156613 AAATTG-TCGACCAATTGCTAGATTCACAACAAATCAAATTAGCAACGCCTCGCATGAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * * *
3156677 ACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCTGATAGGGGGAGAACAAGTTCATTAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3156742 GAGAAG
131 GAGAAG
* *
3156748 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* ** * ** * * *
3156813 ACATTTCTAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3156877 TGAGAAG
130 TGAGAAG
* * * * * *
3156884 GACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATGAGCAATGCCTCGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * *
3156949 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGAGAGAGGGAGAAAAAGTTTATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3157014 GAGAAG
131 GAGAAG
* * * * * ** * *
3157020 AACTTGTTCAACCTATTACTAGATTCACAATACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * ** *
3157085 ACATTTCTAATAGAGAGTTTGTAATGAGAA-AACTTATCCGACAGAGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3157149 GAGAAT
131 GAGAAG
* * * * * *
3157155 AACTTGTTCG-GCTGATTACTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATT
1 AACTTGTTCGACCT-ATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
* * ** * * *
3157219 GACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTAGATAGAGGGGGAAGAAGTTCCTA
65 GACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATA
*
3157284 ACGAG-AG
129 ATGAGAAG
* * ** * *
3157291 TAACATATTCGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
1 -AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGAT
* * * * * *
3157355 TGGCATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGCGAGAAGAAGTTAATA
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATA
3157420 ATGAGAAG
129 ATGAGAAG
* * * ** * **
3157428 AAATTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3157493 CCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-AGTTCATAA
*
3157557 TGTGAAG
130 TGAGAAG
* *
3157564 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACCTCAATTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* *
3157629 ACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGA-GGAGAAGATGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3157693 GAGAAG
131 GAGAAG
* ** * * * * * * *
3157699 AACTTCTTCGAGTTATTG-TAGATT-ACAACAATTCTAATTAGCAATGCCTCGCTTTAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3157762 ACATTTCCAATAGAGAGTTCCTAATAAGAAGAACTTAT-CGACAGGGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3157826 GAGAAG
131 GAGAAG
* * *
3157832 AACTTGTTCGACC-ATTGCTTA-ATTCAC-ACA--TCGAATCAACAACGCCTCTCTTGAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
** * * ** * * *
3157892 GACATTTCCAATTCAGAGTT-CTAATGAAAAGAACCCATATGATAGAGGAAGAAGAAGTTCTTAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3157956 T--G-AG
130 TGAGAAG
* * **
3157960 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAGCAA----TTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3158021 CCATTTTCAATGGAGAGTTTCTAATGAG-AGAA--CAT-C-TCAGAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3158081 GAGAAG
131 GAGAAG
* * *
3158087 AACTTGTTCGACCTATTGTTAGATTCACAACACTTCAAATTA-C-A--CCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* *
3158148 ACATTTCCAATTGGAGAGTT-CTAATGAGAAAAACTCATCCGA-AGATGGAGAAGAAGTTCATAA
66 ACATTTCCAA-TGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3158211 TGAGAAG
130 TGAGAAG
* * ** * ** *
3158218 AAATTG-TCGACCAATTGCTAGATTCACAACAAATCAAATTGGCAATGCCTGCA--TGA-GGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCT-CACTTGAGGGATT
* * * * *
3158279 GACATTTCCTAATAGAGAGTTCCTAATGAGAA-AACTCATCTGATAGGGGGAGAAGAAGTTCATT
65 GACATTTCC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATA
3158343 ATGAGAAG
129 ATGAGAAG
* *
3158351 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* ** * ** * * * *
3158416 ACATTTCTAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATATGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3158480 TGAGAAG
130 TGAGAAG
** * * * * *
3158487 GCCTTTTTTGACCTATTTCTAGATTCACAACACTTCGAATCAGCAATGCCTCGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3158552 ATATTTCTAATGGAGAGTTCCGAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTTTATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3158617 GAGAAG
131 GAGAAG
* * * * * ** * *
3158623 AACTTGTTCAACCTATTACTAGATTCACAATACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * * * *
3158688 ACATTTCTAATAGAGAGTT-TTAATTA-AAAAACTTATCCGAAAGAGGGAGAAGAAGTTCATAAC
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3158751 GAGAAT
131 GAGAAG
* * * * * * * *
3158757 AAGTTGTTCGGCCGATTACTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3158822 ACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3158887 CGAG-AG
130 TGAGAAG
* * ** * *
3158893 TAACATATTCGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
1 -AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGAT
* * * * * *
3158957 TGGCATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGCGAGAAGAAGTTAATA
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATA
3159022 ATGAGAAG
129 ATGAGAAG
* * * ** * **
3159030 AAATTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3159095 CCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-AGTTCATAA
*
3159159 TGTGAAG
130 TGAGAAG
* *
3159166 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACCTCAATTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * *
3159231 ACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGAGAAGATGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3159296 GAGAAG
131 GAGAAG
* ** * * * * * * * * *
3159302 AACTTCTTCGAGTTATTGTTAGATTTACAACAATTCTAATTAGCAATGCCTCGCTTTAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3159367 ACATTTCCAATAGAGAGTTCCTAATAAGAAGAACTTATCAGAAAGGGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3159432 GAGAAG
131 GAGAAG
* * * * *
3159438 AACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAATCAACAACGCATCTCTTGAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
* ** * * * ** * *
3159502 GACAATTCCAATTCAGAGTTCTTAATGAAAAGAACCCATATGACAGAGGAAGAAGAAGTTCTTAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3159567 TGAGAAG
130 TGAGAAG
* * * * *** **
3159574 AACTTGTTCGACCTATTTCTAGATTCACAATACTTCGAATGAACAATTTCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3159639 CCATTTTCAATGGAGAGTTTCTAATGAGAAGAACACATCTGACAGAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3159704 GAGAAG
131 GAGAAG
* * * * ** *
3159710 AACTTGTTCGACCTATTGTTAGATTCACAACACTTCAAATTAGTAATACATCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * *
3159775 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3159840 GAGAAG
131 GAGAAG
* * ** * * * *
3159846 AAATTG-TCGACCAATTGCTAGATTCACAACAAATCAAATTAGCAACGCCTCACATGAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3159910 ACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCAGATAGAGGGAGAAGAAGTTCATTAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3159975 GAGAAG
131 GAGAAG
* * * *
3159981 AACTTGTCCGACCTATTACTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* ** * ** * * *
3160046 ACATTTCTAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3160110 TGAGAATG
130 TGAGAA-G
* * * * *
3160118 -ACTTGTTTGACCTATTTCTAGATTCACAACAATTCGAATCAGTAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * *
3160182 ATATTTCCAATGGAGAGTTACTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3160247 GAGAAG
131 GAGAAG
* * * * * ** * * *
3160253 AACTTGTTCAACCTATTGCGAGATTCATAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3160318 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3160382 GA-AAT
131 GAGAAG
* * * * *
3160387 AACTTGTTCGACCTATTTCTAGGTTCATAAAACTTTGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3160452 ACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCGATAGAGGGAAAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3160517 TGAGAAT
130 TGAGAAG
** * * * *
3160524 AACTTGTTCGACCTATTAATTGATTCACAACACTTCGAATCAACAATGCCTCACTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * ** *
3160589 ACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATATGATAGAGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3160654 GAGAAG
131 GAGAAG
* * * * * *** *
3160660 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCAAATGAACAATGCCTTGGTTGAGGGATTT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * * * * *
3160725 CCATTTTCAATGGAGAGTTTCTAATTAGAAGAACGCATCTGACAGAGGAAGAAGTAGCTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3160790 GAGAAG
131 GAGAAG
* * * * * *
3160796 AACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAACACCTCACTTAAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * *
3160861 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3160926 GAGAAG
131 GAGAAG
* ** * * * * *
3160932 AACTTG-TGGACCTATTGCTAGATTCACAACAAATCAAATTAGCAAAGCCTCGCTTGAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3160996 ACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCAGATAGGGGGAGAAGAAGTTCATTAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3161061 GAGAAT
131 GAGAAG
* * *
3161067 AACTTGTTCGACCTATTACTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
** * * ** * * * *
3161132 ACATTTCCAATTCAGAGTTCCTAATGTA-AAAAACCCATATGACAGATGGACAATATGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3161196 TGAGAAG
130 TGAGAAG
* * * *
3161203 GACTTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3161268 ATATTTCCAATGGAGAGTACCGAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTTTATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3161333 GAGAAG
131 GAGAAG
* * * * * ** * *
3161339 AACTTGTTCAACCTATTACTAGATTCACAATACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * * *
3161404 ACATTTCTAATAGAGAGTT-TTAATTA-AAAAACTTATCCGAAAGAGGGAGAAGAAGTTCATAAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCAT-AA
* *
3161467 CGAG-AT
130 TGAGAAG
* * * *
3161473 AA-TTGTTCG-CCTA---CTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3161533 ACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3161598 CGAG-AG
130 TGAGAAG
* * *
3161604 TAAC--ATTCGACCTAAT-CGA-ATT-AC-A-ACTTCGAAT---C-ACGCCTCACTTGAGGGATT
1 -AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
* * * **
3161658 GGCATTTCCAAT-G-GA-TTCGTAATAAGAAGAACTCATATGACAGAGGGAGAAGAAGTTCATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3161720 AGAGAAG
130 TGAGAAG
* * * * **
3161727 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3161792 TCATTTTCAATGGAGAGTTTCTAATTAGAAGAACGCATCTGACAG-GGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3161856 GAGAAG
131 GAGAAG
* * * *
3161862 AACTTGTTCGACCTATTGCTAGATT--CAACACTTCAAATTAGTAACACCTCACTT--GGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* ** * * * * *
3161923 ATATTTCCGTTGGAGAGTTCCTAATGAGAAAAACTCATCTGATAGATGGAGTAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3161988 GAGAAG
131 GAGAAG
* ** * * *
3161994 AACTTG-TCGACCTATAGCTAGATTCACAACAAATCAAATTAGCAACGCCTCACTTGAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
** * * * * * *
3162058 GTATTTCTAATAGAGAGTTCATAATGAGAAGAACTCATCAGATAGGGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3162123 GAGAAG
131 GAGAAG
* *
3162129 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
** * * * * *
3162194 ACATTTCCAATTCAGAGTTCCTAAT--TAAGAAACCCAT--GACAGATGGAAAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAG-AACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3162255 TGAGAAG
130 TGAGAAG
* * * * *
3162262 GAC-TGTTTGA-CTATTGCTAGATTCACAACACTTCGAATCAGTAATGCCTCGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
3162325 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAAC-CATCCGACA-A---AG-AGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3162384 GAGAAG
131 GAGAAG
* * * * ** * *
3162390 AACTTGTTCAACCTATTACTAGATTCACAACACTTTGAATCA-AAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3162454 ACATTTCTAATAGAGAGTTCGTAATGAGAA-AACTTATCCGACAGAGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3162518 GAGAAT
131 GAGAAG
* * * * *
3162524 AACTTGTTCGACCTATTACTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3162589 ACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGACATAGGGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3162654 TGAGAAT
130 TGAGAAG
* * ** * *
3162661 AACATGTTTGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
* * *
3162725 GACATTTCCAATGGAGAGTTCGTAATAAGAAGAAATCATCCGACAGAGGGAGAAGAAG-T--TAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3162787 TGAGAAG
130 TGAGAAG
* * ** * **
3162794 AAAATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGAGGGATT
1 -AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
* * * *
3162859 GCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATAGTTCATA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-AGTTCATA
*
3162923 ATGTGAAG
129 ATGAGAAG
* * * *
3162931 AACTAGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCAATTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * *
3162996 AGATCTCCAATGGAGAGTTCCTAATGAGAA-AATCTCATCCTACAGACGGAGAAGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAA-CTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3163060 TGAGATG
130 TGAGAAG
* * * * * * ** * * *
3163067 AACATCTTCGACCTATTGCTAGATTTACAACAATTCTAATTAGCAATACCTCGCTTTAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3163132 ACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTTATCAGACAGGGGGAGAAAAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3163197 GAGAAG
131 GAGAAG
* * * * ** *
3163203 AACTTGTTCGACCTATTTCTTA-ATTCATAACACATCGAATCAACAACGCCTCTGTTGAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATT
* ** * * * ** * * *
3163267 GACATTTCTAATTCAGAGTTCTTAATGAAAAGAACCCATATGATAGAGGAAGAAGAAGTTCTTAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
3163332 TGAGAAG
130 TGAGAAG
* * ** *** **
3163339 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAATAATTTCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3163404 CCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAGAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3163469 GAGAAG
131 GAGAAG
* * * * *
3163475 AACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * *
3163540 ACATTTCTATTGGAGAGTTCCGAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
*
3163605 GAGATG
131 GAGAAG
* ** * * * * * *
3163611 AAATTG-TCGACCTATAT-CTAGATTCACAACAAAT-AATATTAGTAATGCCT-AGCATGAGGAA
1 AACTTGTTCGACCTAT-TGCTAGATTCACAACACTTCGA-ATCAGCAACGCCTCA-CTTGAGGGA
* * * * * * *
3163672 TTGAAATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCAGATAGGGGGAGAATAAGTTCAT
63 TTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCAT
3163737 AATGAGAAG
128 AATGAGAAG
* * * *
3163746 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCAAATCAGCAACGCCTCACTTGAGGGACTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* * * * * *
3163811 ACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCAACAGAGAGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAA
*
3163876 TGAGAAT
130 TGAGAAG
* ** * * * * *
3163883 AACTTATTCGACCTATTAATCGATTCACAA-ACTTCGAATCAACAATG-CTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
* **
3163946 ACATTT-CAAT-GAGAG-TCGTAA--AGAA-AACTCATATGACAGA-GG-GAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
3164003 GAGAAG
131 GAGAAG
*
3164009 AACTTGTTTGACCTA
1 AACTTGTTCGACCTA
3164024 GACATTTCTA
Statistics
Matches: 15478, Mismatches: 2741, Indels: 623
0.82 0.15 0.03
Matches are distributed among these distances:
122 47 0.00
123 4 0.00
124 30 0.00
125 10 0.00
126 63 0.00
127 202 0.01
128 110 0.01
129 162 0.01
130 182 0.01
131 357 0.02
132 190 0.01
133 325 0.02
134 587 0.04
135 2767 0.18
136 8903 0.58
137 1505 0.10
138 34 0.00
ACGTcount: A:0.36, C:0.17, G:0.20, T:0.27
Consensus pattern (136 bp):
AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
GAGAAG
Found at i:3146459 original size:544 final size:542
Alignment explanation
Indices: 3145362--3176048 Score: 28634
Period size: 544 Copynumber: 56.7 Consensus size: 542
3145352 ATTTCTGAAT
* * * * * * *
3145362 AACTTGTTCGACCTATTACTAGATTCATAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3145427 ACATTTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCA-TCGACAGAGGGAGAAGAAGTTCATAA
* * ** * * ** *
3145492 TGAGAATAACATGTTCGACCTATTAATCGAATT-ACAACACTTCGAATCAATAACGCCTCACTTG
129 TGAGAAGAACTTGTTCGACCTATTGCTAG-ATTCACAAAACTTCGAATCAGCAATGCCTCACTTG
* * * * *
3145556 AGGGATTAACATTTCCAATGGAGAGTAT-GTAATAAGAAGAACTCATCCGATAGAGGGAGAAGAT
193 AGGGATTGACATTTCCAATGGAGAGT-TCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAA
* * * * *
3145620 GTTAATAATGAGAAGAAATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAATAATGCC
257 GTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCC
** * * * * *
3145685 TTGCTTGAGGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCAAAAGAGGGA
322 TCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGA
* * **
3145750 GAAGTAGTTCATAATGTGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAAT
387 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
** * *
3145815 AACACCTCACTTGAGGGATTGACATCTCCAATGGAGAGTTTCTAATGAGAAGAACTCATCCGACA
452 AATGCCTCACTTGAGGGATTGACAT-TTCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
*
3145880 GAGGGAGAAAAAGTTCATAATGAGAAG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* * * ** ** * *
3145907 AACTTGTTCAACCTATTGCTAGATTCACAACACTTTGATTCAACAACGAATTGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3145972 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCTACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * ** *
3146036 GAGAATAACTTGTTTGACCTATTGCTAGATTCATAAAACTTTAAATCAGCAATGCCTCACATGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * *
3146101 GGATTGACATTTTCTAATGGAAAGTTCTTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
195 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * ** * * *
3146166 TCCTAATGAGGATAACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAATAATGCCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * * ** *
3146231 GCTTGAGGGATTAAAATTTCCAATGGAGAGTTCGC-AATAAGAAGAACTCATATGACAAAGGGAG
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTC-CTAATGAGAAGAACTCATCCGACAGAGGGAG
* * **
3146295 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAATA
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCA
* * *
3146360 ATGCCTTACTTGAGGGATTGCCATATTCAATGGAGAGTTTCTAATGAGAAGAACTCATCCGACAG
453 ATGCCTCACTTGAGGGATTGACAT-TTCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
*
3146425 AGGGAGAAAAAGTTCATAATGAGAAG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * * ** * * *
3146451 AACTTGTTCAACCTATTGCTAGATTCACAACACTTTGAATCAACAATGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3146516 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * **
3146580 GAGAATAACTTGTTCGACCTATTGCTAGATTCATAAAACTTTAAATCAGCAATGCCTCACTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * * *
3146645 GGATTGACATTTTCTAATGGAAAGTTCTTAATGAGAAGAACTCATCTGACAGAGGGAGAAGAAGT
195 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * ** * * *
3146710 TCCTAATGAGAATAACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAATAATGCCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * ** *
3146775 GCTTGAGGGATTAACATTTCCAATGGAGAGTTCGC-AATAAGAAGAACTCATATGACAAAGGGAG
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTC-CTAATGAGAAGAACTCATCCGACAGAGGGAG
* * *
3146839 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACA
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCA
** * * * * *
3146904 ATGCCTTGCTTGAGGGATTGCCATATTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAA
453 ATGCCTCACTTGAGGGATTGACAT-TTCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
*
3146969 AGGGAGAAGTAGTTCATAATGAGAAG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * * * **
3146995 AACTTGTTCGACCTATTTCTAGATTCACAACAGTTCAAATTAGTAA-GACCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACG-CCTCACTTGAGGGATT
* *
3147059 GACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * * * * * *
3147124 TGAGAATAACTTG-TCAAACTATTGCTAGATTCACAACAA-ATCAAATTAGTAATGCCTCACTTG
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAA-AACTTCGAATCAGCAATGCCTCACTTG
* * * * * * *
3147187 AGGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAGCTCATCAGATAGGGGGAGAAGAAT
193 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
* * * * *
3147252 TTCATAATGAGAAGAACTTGTTCGACCTATTGCTTGATACACAATACTTCGAATTAGCAACG-CT
258 TTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCT
** * ** *
3147316 CACTTGAGGGATTGACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGA
323 CACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGA
* * * * *
3147380 CAATAAGTTCATAATGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATCAGC
387 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
*
3147445 AATGCCTCGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
452 AATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
*
3147510 GAGGGAGAAAAAGTTCATAATGAGAAG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* * * ** * * *
3147537 AACTTGTTCAACCTATTGCTAGATTCATAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3147602 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * * *
3147666 GAGAATAACTTGTTCGACCTATTTCTAGATTCATAAAACTTTGAATCAGCAACGCCTCACTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * * *
3147731 GGATTGACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCGACAGAGAGAGAAGAAGT
195 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * ** * *
3147796 TCCTAATGAGAATAACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAACAATGCCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * ** *
3147861 GCTTGAGGGATTAACATTTCCAATGGAGAGTTCGC-AATAAGAAGAACTCATATGACAAAGGGAG
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTC-CTAATGAGAAGAACTCATCCGACAGAGGGAG
* * *
3147925 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACA
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCA
** * * * * *
3147990 ATGCCTTGCTTGAGGGATTGCCATATTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAA
453 ATGCCTCACTTGAGGGATTGACAT-TTCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
*
3148055 AGGGAGAAGTAGTTCATAATGAGAAG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * * * **
3148081 AACTTGTTCGACCTATTTCTAGATTCACAACAGTTCAAATTAGTAA-GACCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACG-CCTCACTTGAGGGATT
* *
3148145 GACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * * * * * *
3148210 TGAGAATAACTTG-TCAAACTATTGCTAGATTCACAACAA-ATCAAATTAGTAATGCCTCACTTG
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAA-AACTTCGAATCAGCAATGCCTCACTTG
* * * * * * *
3148273 AGGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAGCTCATCAGATAGGGGGAGAAGAAT
193 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
* * * * *
3148338 TTCATAATGAGAAGAACTTGTTCGACCTATTGCTTGATACACAATACTTCGAATTAGCAACGCCT
258 TTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCT
** * ** *
3148403 CACTTGAGGGATTGACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGA
323 CACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGA
* * * *
3148467 CAATAAGTTCATAATGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAGC
387 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
*
3148532 AATGCCTCGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
452 AATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
* *
3148597 GAGGGAGAAAAAGTTTATAATGAGAAG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* * * * * * ** * *
3148624 AACTTGTTCAACCTATTACTATATTCATAATACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * ** * *
3148689 ACATTTCTAATAGAGAGTTTGTAATGAGAA-AACTTATCCGACAGAGGGAGAAAAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* ** * * * * * *
3148753 GAGAATAACTTGTTCGGTCGATTACTAGATTCACAAAACTTTGAATTAGTAATACCTCACTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * * * *
3148818 GGATTGACATTTTCTAATAGAGAGTTACTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAGT
195 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * * * ** *
3148883 TCCTAACGAG-AGTAACATATTCAACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCC
259 TCATAATGAGAAG-AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAACAACGCC
* * * * *
3148946 TCACTTGAGGGATTGGCATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGCGA
322 TCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGA
* * * * **
3149011 GAAGAAGTTAATAATGAGAAGAAATTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAAT
387 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
** * * * *
3149076 AATGCCTTGCTTGAGGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAA
452 AATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
*
3149141 GAGGGAGAA-ATAGTTCATAATGTGAAG
516 GAGGGAGAAGA-AGTTCATAATGAGAAG
* *
3149168 AAATTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* *
3149233 ACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* ** * * * * * *
3149298 GAGAAGAACTTCTTCGAGTTATTGCTAGATTTACAACAA-TTCTAATTAGCAACGCCTCGCTTTA
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAA-AACTTCGAATCAGCAATGCCTCACTTGA
* * * * * *
3149362 -GGAAT-ACATTTCCAATAGAGAGTTCCTAATAAGAAGAACTTATCAGACAGGGGGAGAAGAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
*
3149425 TCATAATGAGAAGAACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAATCAACAACGCCT
259 TCATAATGAGAAGAACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCT
* * * ** * * * ** * *
3149489 CTCTTAAGAGATTGACATTTCCAATTCAGAGTTCTTAATGAAAAGAACCCATATGGCAGAGGAAG
323 CACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAG
* * * * *
3149554 AAGAAGTTCTTAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAATACTTCGAATGAACA
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCA
** ** * * * *
3149619 ATTTCTTGCTTGAGGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAG
453 ATGCCTCACTTGAGGGATTGACA-TTTCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
*
3149684 AGGGAGAAGTAGTTCATAATGAGAAG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * * ** *
3149710 AACTTGTTCGACCTATTGTTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3149775 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * * * * * * *
3149840 GAGAAGAAATT-TTTGACCAATTGCTAGATTCACAACAA-ATCAAATTAGCAACGCCTCGCATGA
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAA-AACTTCGAATCAGCAATGCCTCACTTGA
* * * * * * *
3149903 GGAATTGACATTTCTAATAGAGAGTTCCAAATGAGAAGAACTCATCAGATAGGGGGAGAAGAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * *
3149968 TCATTATGAGAAGAACTTGTTCGACCTATTGCTTGATTCACAAAACTTCGAATCAGCAACGCCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
** * * ** *
3150033 ACTTGAGGGATTGACA-TTCCAAATTCAGAGTTCCAAATGTA-AAGAACCCATATGACAGATGGA
324 ACTTGAGGGATTGACATTTCC-AATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGA
* * * * * *
3150096 CAATAAGTTCATAATGAGAATG-ATTTGTTTGACCTATTACTAGATTCACAACAATTCGAATCAG
387 GAAGAAGTTCATAATGAGAA-GAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAG
* *
3150160 CAATGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCGTAATGAGAAGAACTCATCCGAT
451 CAATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGAC
* *
3150225 AGAGGGACAAAAAGTTCATAATGAGAAG
515 AGAGGGAGAAGAAGTTCATAATGAGAAG
* * * * * ** * * *
3150253 AACTTGTTCAAGCTATTACTAGATTCATAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * * * *
3150318 ATATTTCCAATAGAGAGTTTCGAACGTGAA-AACTCATTCGACAGAGAGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCA-TCGACAGAGGGAGAAGAAGTTCATAAT
* * * * *
3150382 GAGAATAACTTGTTCGACCTATTTCTAGATTCATAAAACTTTGAATCAGCGATGCCTCACTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * * *
3150447 GGATTGATATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCGACAGAGGGAGAAGAAGT
195 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * ** * *
3150512 TCCTAATGAGAATAACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAACAATGCCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * * **
3150577 GCTTGAGGGATTAACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATATGACAGAGGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* * * *
3150642 CGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAA
** * * * * * *
3150707 TGCCTTGCTTGAGGGATTGCCATTTTCAATGGAGAGTTTCTAATTAGAGGAACGCATCTGACAGA
454 TGCCTCACTTGAGGGATTGACA-TTTCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGA
* * *
3150772 GGAAGAAGTAGCTCATAATGAGAAG
518 GGGAGAAGAAGTTCATAATGAGAAG
* * * ** *
3150797 AACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3150862 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACCCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * ** * *
3150927 GAGAAGAACTTG-TCGACCTATTGCTAAATTCACAATAA-ATAAAATTAGCAACGCCTCACTTGA
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAA-AACTTCGAATCAGCAATGCCTCACTTGA
* * * ** * * * *
3150990 GGAATTTACATTTCTAATAAAGAGTTCCTAATGCGAAGAACTCATCAGATAGGGGGAGAAGAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * *
3151055 TCATAATGAGAAGAACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
** * ** * *
3151120 ACTTGAGGGATTGACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGAT
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAG
* * * * *
3151184 AATAAGTTCATAATGAGAAGGACCTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAGTA
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCA
* *
3151249 ATGCCTCGCTTGAGGGATTGATATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
453 ATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
*
3151314 AGGGATAAGAAGTTCATAATGAGAAG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * * **
3151340 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * * *
3151405 CCATTTTCAATGGAGATTTTCTAATGAGAAGAACGCATCTGACAAAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATC-GACAGAGGGAGAAGAAGTTCATAAT
* * * * *
3151470 GAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAA-GACCTCACTTGA
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATG-CCTCACTTGA
* * *
3151534 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAAAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * ** * * **
3151599 TCATAATGAGAAGAACTTG-TCAAACTATTGCTAGATTCACAACAAATCAAATTAGTAACGCCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * ** * *
3151663 ACTTGAGGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCAAATAG-GGGGGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAG-
* *
3151727 AAGAATTTCATAATGAG-AGAACTTGTTCGACCTATTGCT-GATTCACAATACTTCGAATCAGCA
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCA
* * ** * **
3151790 ACG-C-CACTTGA-GGATTGATATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACA
453 ATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACA
* * *
3151851 GATGGACAATAAGTTCATAATGAGAAG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* * * * * *
3151878 GACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATCAGCAATGCCTCGCTT-AGGGA-TG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* *
3151941 ACATTTCCAAT-G-GAG-TCCTAATGAG-A-AACTCA-CGACAGAGGGAGAAAAAGTTTATAATG
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCGACAGAGGGAGAAGAAGTTCATAATG
* * * * * * **
3152000 AGAAGAACTTGTTCAACCTATTACTAGATTCACAATACTTTGAATCAACAACGTATCACTTGAGG
131 AGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAGG
* * * * ** * * *
3152065 GTTTAACATTTCTAATAGAGAGTTTGTAATGAGAA-AACTTATCCGACAGAGAGAGAAGAAGTTT
196 GATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTC
* * * * * * * * *
3152129 ATAATGAGAATAACTTGTTTG-GCTGATTACTAGATTCACAAAACTTTGAATTAGCAATGCCTCA
261 ATAATGAGAAGAACTTGTTCGACCT-ATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCA
* * * *
3152193 CTTGAGGGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGATAGAGGGAGA
325 CTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* * * * ** * *
3152258 AGAAGTTCCTAACGAG-AGTAACATATTCGACCTATTAATCGAATT-ACAACACTTCGAATCAAC
389 AGAAGTTCATAATGAGAAG-AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGC
* * * * *
3152321 AACGCCTCACTTGAGGGATTGGCATTTCCAATTGAGAGTTCGTAATAAGAAG-ACTCAT-C-A-A
452 AATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
* *
3152382 TGA--GA-AA-AA-CTCATCCGACA-GACGGAG
516 -GAGGGAGAAGAAGTTCAT---A-ATGA-GAAG
* * **
3152409 AA---GTTTGACCTATT-CTAGA-TCACAACACTTCGAATCAA-ATAAGCCTTGCTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACA-ACGCCTCACTTGAGGGATT
* * * * *
3152468 GCCATTTCCAATGGAGAGTTTCTAATGATAATAACTCATCCGAAAGAGGGAGAA-ATAGTTCATA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGA-AGTTCATA
* * * **
3152532 ATGTGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCACTTG
128 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTG
* *
3152597 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGAGAAGAAG
193 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
* ** * * * * * *
3152662 TTCATAATGAGAAGAACTTCTTCGAGTTATTGCTAGATTTACAACAATTCTAATTAGCAATGCCT
258 TTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCT
* * * * * * * *
3152727 CGCTTTAGGAATTGACATTTCCAATAGAGAGTTCCTAATAAGAAGAACTTATCAGACAGGGGGAG
323 CACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAG
* *
3152792 AAGAAGTTAATAATGAGAAGAACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAAATTCA
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGC-TAGATTCACAACACTTCG-AA-TCA
** * * * ** ** * * * * * * **
3152856 -CAACACATCGA-ATCA-ACAACG-CCTCTC-TTGAGAGATGTTCTTAATGAAAAGAACCCATAT
450 GCAATGCCTC-ACTTGAGGGATTGACATTTCAATG-GAGA-GTTCCTAATGAGAAGAACTCATCC
* **
3152916 GACAGAGGAAGAAGAAGTTTTTAATGAGAAG
512 GACAGAGGGAGAAGAAGTTCATAATGAGAAG
* * *** **
3152947 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATTTCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3153012 CCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGT-ATCTGACAGAGGGAGAAGTAGTTTCATA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAAC-TCATC-GACAGAGGGAGAAGAAG-TTCATA
* * * * * * **
3153076 ATGAGAAGAACTTGTTCGACCTATTGTTAGATTCACAACACCTCAAATTAGTAACACCTCACTTG
128 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTG
* * * * * *
3153141 AGGGATTGACATTTCCATTGGAGAGTTCCTAATGGGAAAAACCCATCCGACAAATGGAGAAGAAG
193 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
** ** * *
3153206 TTCATAATGAGAAGAACTTG-TCGACCTATTGCTAGATTCACAACAAATAAAATTAGCAACGCCT
258 TTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCT
* * * * * * *
3153270 CACTTGAGGAATTGGCATTTCTAATAGAGAGTTCCTAATGCGAAGAACTCATCAC-ATAGGGGGA
323 CACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATC-CGACAGAGGGA
* *
3153334 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGC
387 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
* ** * **
3153399 AACGCCTCACTTGAGGGATTGACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGAC
452 AATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGAC
* * *
3153463 AGATGGACAATAAGTTCATAATGAGAA-
515 AGAGGGAGAAGAAGTTCATAATGAGAAG
* * * * *
3153490 AGACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATCAGCAATGCCTCGCTTGAGGGATT
1 A-ACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
*
3153555 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTTCATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * * * * * * **
3153620 TGCGAAGAACTTGTTCAACCTATTACTAGATTCACAACACTTTGAATCAACAACGTATCACTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * * * * * *
3153685 GGGTTTAATATTTCTAATAGAGAGTTCGTAATGAGAA-AACTTATCCGACAGAGGGAGAAGAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * * * * * *
3153749 TCATAATGAGAATAACTTGTTCGACCTATTACTAGATTCATAAAACTTTGAATTAGCAATGCCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * *
3153814 ACTTGAGGGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGACAGAGGGAG
324 ACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAG
* * * * ** * **
3153879 AAGAAGTTCCTAATGAGAATAACATGTTTGACCTATTAATCGAATT-ACAACACTTCGAATCAAT
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGC
* * * * *
3153943 AACGCCTCACTTGAGGGATTAACATTTCCAATGTAGAGTTCGTAATTAAGAAGAACTCATCCGAC
452 AATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAA-TGAGAAGAACTCATCCGAC
*
3154008 AGAGGGAGAAGAAGTTAATAATGAGAAG
515 AGAGGGAGAAGAAGTTCATAATGAGAAG
* * * * **
3154036 AAATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3154101 CCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * **
3154166 GTGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCACTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * *
3154231 GGATTGACATCTCCAATGGAGAGTTTCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTT
195 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
* * ** *
3154296 CATAATGAGAAGAACTTGTTCAACCTATTGCTAGATTCACAACACTTTGAATCAACAACGAATCG
260 CATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCA
* * * * * *
3154361 CTTGAGGGTTTAATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCTACAGAGGGAGAA
325 CTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAA
* * * * * **
3154425 GAAGTTCATGATGAGAATAACTTGTTTGACCTATTGCTAGATTCATAAAACTTTAAATCAGCAAT
390 GAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAAT
* * *
3154490 GCCTCACTTGAGGGATTGACATTTTCTAATGGAAAGTTCTTAATGAGAAGAACTCATCCAACAGA
455 GCCTCACTTGAGGGATTGACA-TTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGA
* * *
3154555 GGGAGAAGAAGTTCCTAATGAGGAT
518 GGGAGAAGAAGTTCATAATGAGAAG
** * * * * *
3154580 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAATAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3154645 ACATTTCCAATGGAGAGTTCGC-AATAAGAAGAACTCATATGACAAAGGGAGAAGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTC-CTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * * * **
3154709 TGAGAAGAACTTGTTCAACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * * * * * * *
3154774 GGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGAAAAAGGGAGAAGTAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * **
3154839 TCATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAA-GACCT
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACG-CCT
* *
3154903 CACTTGAGGGATTGA-ATTTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGA
323 CACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGA
* * ** * * *
3154967 GAAGAAGTTCATAATGAGAAGAACTTG-TCAAACTATTGCTAGATTCACAACAAATCAAATTAGT
387 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
* * * * *
3155031 AACGCCTCACTTGAGGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCAGATA
452 AATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
* *
3155096 GGGGGAGAAGAATTTCATAATGAGAAG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* * * *
3155123 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGTTTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * * *
3155188 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * * *
3155252 TGAGAA-AGACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATCAGCAATGCCTCGCTTG
129 TGAGAAGA-ACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTG
*
3155316 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAG
193 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
* * * * * * **
3155381 TTTATAATGAGAAGAACTTGTTCAATCTATTACTAGATTCACAATACTTTGAATCAACAACGTAT
258 TTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCT
* * * * ** *
3155446 CACTTGAGGGTTTAACATTTCTAATAGAGAGTTTGTAATGAGAA-AACTTATCCGACAGAGGGAG
323 CACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAG
* * * * * *
3155510 AAGAAGTTCATAATGAGAATAACTTGTTCG-GCTGATTACTAGATTCACAAAACTTTGAATTAGC
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCT-ATTGCTAGATTCACAACACTTCGAATCAGC
* * *
3155574 AATGCCTCACTTGAGGGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGAT
452 AATGCCTCACTTGAGGGATTGACA-TTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGAC
* *
3155639 AGAGGGAGAAGAAGTTCCTAACGAG-AG
515 AGAGGGAGAAGAAGTTCATAATGAGAAG
* * ** *
3155666 TAACATATTCGACCTATTAATCGAATT-AC-A-A---C-AATCAACAACGCCTCACTTGAGGGAT
1 -AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
* * * * * *
3155724 TGGCATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGCGAGAAGAAGTTAATA
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATA
* * * * ** **
3155789 ATGAGAAGAAATTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTG
128 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTG
* * * *
3155854 AGGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATA
193 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-A
* * *
3155918 GTTCATAATGTGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACC
257 GTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCC
* * *
3155983 TCAATTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGA
322 TCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGA
* ** * * * * *
3156048 GAAGAAGTTCATAATGAGAAGAACTTCTTCGAGTTATTGTTAGATTTACAACAATTCTAATTAGC
387 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
* * * * * * * *
3156113 AATGCCTCGCTTTAGGAATTGACATTTCCAATAGAGAGTTTCTAATAAGAAGAACTTATCAGACA
452 AATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
*
3156178 GGGGGAGAAGAAGTTCATAATGAGAAG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* * *
3156205 AACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAATCAACAACGCCTCTCTTGAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
** * * * * * * *
3156269 GACATTTCCAATTCAGAGTTCTTAATGAAAAGAACCCATATGATAGAGGAAGAAGAAGTTCTTAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * ** **
3156334 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAGCAATTTCTTGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * * * * *
3156399 GGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAGAGGGAGAAGTAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * ** *
3156464 TCATAATGAGAAGAACTTGTTCGACCTATTGTTAGATTCACAACACTTCAAATTAGTAACACCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * *
3156529 ACTTGAGGGAATGACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* * ** * *
3156594 AGAAGTTCATAATGAGAAGAAATTG-TCGACCAATTGCTAGATTCACAACAAATCAAATTAGCAA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAA
* * * * * * * *
3156658 CGCCTCGCATGAGGAATTGACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCTGATAGG
454 TGCCTCACTTGAGGGATTGACATTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGA
* *
3156723 GGGAGAACAAGTTCATTATGAGAAG
518 GGGAGAAGAAGTTCATAATGAGAAG
* * *
3156748 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* ** * * * * *
3156813 ACATTTCTAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * * * * *
3156877 TGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATGAGCAATGCCTCGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* *
3156942 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGAGAGAGGGAGAAAAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * * * **
3157007 TTATAATGAGAAGAACTTGTTCAACCTATTACTAGATTCACAATACTTTGAATCAACAACGTATC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * * ** *
3157072 ACTTGAGGGTTTAACATTTCTAATAGAGAGTTTGTAATGAGAA-AACTTATCCGACAGAGGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* * * * * *
3157136 AGAAGTTCATAATGAGAATAACTTGTTCG-GCTGATTACTAGATTCACAAAACTTTGAATTAGCA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCT-ATTGCTAGATTCACAACACTTCGAATCAGCA
* ** *
3157200 ATGCCTCACTTGAGGGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTAGATA
453 ATGCCTCACTTGAGGGATTGACA-TTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
* * *
3157265 GAGGGGGAAGAAGTTCCTAACGAG-AG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* * ** *
3157291 TAACATATTCGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
1 -AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
* * * * * *
3157355 TGGCATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGCGAGAAGAAGTTAATA
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATA
* * * * ** **
3157420 ATGAGAAGAAATTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTG
128 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTG
* * * *
3157485 AGGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATA
193 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-A
* * *
3157549 GTTCATAATGTGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACC
257 GTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCC
* *
3157614 TCAATTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGA-GGA
322 TCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGA
* * ** * * *
3157678 GAAGATGTTCATAATGAGAAGAACTTCTTCGAGTTATTG-TAGATT-ACAACAATTCTAATTAGC
387 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
* * * * * *
3157741 AATGCCTCGCTTTAGGAATTGACATTTCCAATAGAGAGTTCCTAATAAGAAGAACTTAT-CGACA
452 AATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
*
3157805 GGGGGAGAAGAAGTTCATAATGAGAAG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* *
3157832 AACTTGTTCGACC-ATTGCTTA-ATTCAC-ACA--TCGAATCAACAACGCCTCTCTTGAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
** * * * * * *
3157892 GACATTTCCAATTCAGAGTT-CTAATGAAAAGAACCCATATGATAGAGGAAGAAGAAGTTCTTAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * *
3157956 T--G-AGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAGCAAT---T-GCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * * * *
3158014 GGGATTGCCATTTTCAATGGAGAGTTTCTAATGAG-AGAA--CAT-C-TCAGAGGGAGAAGTAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * *
3158074 TCATAATGAGAAGAACTTGTTCGACCTATTGTTAGATTCACAACACTTCAAAT-TAC-A--CCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* *
3158135 ACTTGAGGGATTGACATTTCCAATTGGAGAGTT-CTAATGAGAAAAACTCATCCGA-AGATGGAG
324 ACTTGAGGGATTGACATTTCCAA-TGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAG
* * ** * **
3158198 AAGAAGTTCATAATGAGAAGAAATTG-TCGACCAATTGCTAGATTCACAACAAATCAAATTGGCA
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCA
* * *
3158262 ATGCCTGCA--TGA-GGATTGACATTTCCTAATAGAGAGTTCCTAATGAGAA-AACTCATCTGAT
453 ATGCCT-CACTTGAGGGATTGACATTT-C-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGAC
* *
3158323 AGGGGGAGAAGAAGTTCATTATGAGAAG
515 AGAGGGAGAAGAAGTTCATAATGAGAAG
* * *
3158351 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* ** * * * * * *
3158416 ACATTTCTAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATATGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
** * * * * *
3158480 TGAGAAGGCCTTTTTTGACCTATTTCTAGATTCACAACACTTCGAATCAGCAATGCCTCGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * * *
3158545 GGGATTGATATTTCTAATGGAGAGTTCCGAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * * * **
3158610 TTATAATGAGAAGAACTTGTTCAACCTATTACTAGATTCACAATACTTTGAATCAACAACGTATC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * * * * * * *
3158675 ACTTGAGGGTTTAACATTTCTAATAGAGAGTT-TTAATTA-AAAAACTTATCCGAAAGAGGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* * * * * * * * *
3158738 AGAAGTTCATAACGAGAATAAGTTGTTCGGCCGATTACTAGATTCACAAAACTTTGAATTAGCAA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAA
* * *
3158803 TGCCTCACTTGAGGGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGATAG
454 TGCCTCACTTGAGGGATTGACA-TTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
* *
3158868 AGGGAGAAGAAGTTCCTAACGAG-AG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * ** *
3158893 TAACATATTCGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
1 -AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
* * * * * *
3158957 TGGCATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGCGAGAAGAAGTTAATA
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATA
* * * * ** **
3159022 ATGAGAAGAAATTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTG
128 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTG
* * * *
3159087 AGGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATA
193 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-A
* * *
3159151 GTTCATAATGTGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACC
257 GTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCC
* * *
3159216 TCAATTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGA
322 TCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGA
* * ** * * * * *
3159281 GAAGATGTTCATAATGAGAAGAACTTCTTCGAGTTATTGTTAGATTTACAACAATTCTAATTAGC
387 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
* * * * * * * *
3159346 AATGCCTCGCTTTAGGAATTGACATTTCCAATAGAGAGTTCCTAATAAGAAGAACTTATCAGAAA
452 AATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
*
3159411 GGGGGAGAAGAAGTTCATAATGAGAAG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* * * *
3159438 AACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAATCAACAACGCATCTCTTGAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
* ** * * * * * *
3159502 GACAATTCCAATTCAGAGTTCTTAATGAAAAGAACCCATATGACAGAGGAAGAAGAAGTTCTTAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * * * ** **
3159567 TGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAATACTTCGAATGAACAATTTCTTGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * * * * *
3159632 GGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACACATCTGACAGAGGGAGAAGTAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * ** ** *
3159697 TCATAATGAGAAGAACTTGTTCGACCTATTGTTAGATTCACAACACTTCAAATTAGTAATACATC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * *
3159762 ACTTGAGGGATTGACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* * ** * *
3159827 AGAAGTTCATAATGAGAAGAAATTG-TCGACCAATTGCTAGATTCACAACAAATCAAATTAGCAA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAA
* * * * * *
3159891 CGCCTCACATGAGGAATTGACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCAGATAGA
454 TGCCTCACTTGAGGGATTGACATTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGA
*
3159956 GGGAGAAGAAGTTCATTATGAGAAG
518 GGGAGAAGAAGTTCATAATGAGAAG
* * * * *
3159981 AACTTGTCCGACCTATTACTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* ** * * * * *
3160046 ACATTTCTAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * *
3160110 TGAGAATG-ACTTGTTTGACCTATTTCTAGATTCACAACAA-TTCGAATCAGTAATGCCTCACTT
129 TGAGAA-GAACTTGTTCGACCTATTGCTAGATTCACAA-AACTTCGAATCAGCAATGCCTCACTT
* * *
3160173 GAGGGATTGATATTTCCAATGGAGAGTTACTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAA
192 GAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAA
* * * * **
3160238 GTTCATAATGAGAAGAACTTGTTCAACCTATTGCGAGATTCATAACACTTTGAATCAACAACGAA
257 GTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCC
* * * * * *
3160303 TCGCTTGAGGGTTTAATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGA
322 TCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGA
* * * * * * *
3160367 GAAGAAGTTCATGATGA-AATAACTTGTTCGACCTATTTCTAGGTTCATAAAACTTTGAATCAGC
387 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
* * * *
3160431 AACGCCTCACTTGAGGGATTGACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCGAT
452 AATGCCTCACTTGAGGGATTGACA-TTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGAC
* * *
3160496 AGAGGGAAAAGAAGTTCCTAATGAGAAT
515 AGAGGGAGAAGAAGTTCATAATGAGAAG
** * * *
3160524 AACTTGTTCGACCTATTAATTGATTCACAACACTTCGAATCAACAATGCCTCACTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3160589 ACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATATGATAGAGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * * ***
3160654 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCAAATGAACAATGCCTTGGTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
** * * * * * * * *
3160719 GGATTTCCATTTTCAATGGAGAGTTTCTAATTAGAAGAACGCATCTGACAGAGGAAGAAGTAGCT
195 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
* * * ** *
3160784 CATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAACACCTCA
260 CATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCA
* * * *
3160849 CTTAAGGGATTGACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAA
325 CTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAA
* ** * * *
3160914 GAAGTTCATAATGAGAAGAACTTG-TGGACCTATTGCTAGATTCACAACAAATCAAATTAGCAAA
390 GAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAAT
* * * * * *
3160978 GCCTCGCTTGAGGAATTGACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCAGATAGGG
455 GCCTCACTTGAGGGATTGACATTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAG
* *
3161043 GGAGAAGAAGTTCATTATGAGAAT
519 GGAGAAGAAGTTCATAATGAGAAG
* * * *
3161067 AACTTGTTCGACCTATTACTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * * * * *
3161132 ACATTTCCAATTCAGAGTTCCTAATGTA-AAAAACCCATATGACAGATGGACAATATGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * * *
3161196 TGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * * *
3161261 GGGATTGATATTTCCAATGGAGAGTACCGAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * * * **
3161326 TTATAATGAGAAGAACTTGTTCAACCTATTACTAGATTCACAATACTTTGAATCAACAACGTATC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * * * * * * *
3161391 ACTTGAGGGTTTAACATTTCTAATAGAGAGTT-TTAATTA-AAAAACTTATCCGAAAGAGGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* * * * *
3161454 AGAAGTTCATAAACGAG-ATAA-TTGTTCG-CCTA---CTAGATTCACAAAACTTTGAATTAGCA
389 AGAAGTTCAT-AATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCA
* * *
3161513 ATGCCTCACTTGAGGGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGATA
453 ATGCCTCACTTGAGGGATTGACA-TTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
* *
3161578 GAGGGAGAAGAAGTTCCTAACGAG-AG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* * *
3161604 TAAC--ATTCGACCTAAT-CGA-ATT-AC-A-ACTTCGAAT---C-ACGCCTCACTTGAGGGATT
1 -AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
* * * *
3161658 GGCATTTCCAAT-G-GA-TTCGTAATAAGAAGAACTCATATGACAGAGGGAGAAGAAGTTCATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * * * **
3161720 AGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * * * * *
3161785 GGGATTGTCATTTTCAATGGAGAGTTTCTAATTAGAAGAACGCATCTGACAG-GGGAGAAGAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * ** *
3161849 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATT--CAACACTTCAAATTAGTAACACCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* ** * * * * *
3161912 ACTT--GGGATTGATATTTCCGTTGGAGAGTTCCTAATGAGAAAAACTCATCTGATAGATGGAGT
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* ** * *
3161975 AGAAGTTCATAATGAGAAGAACTTG-TCGACCTATAGCTAGATTCACAACAAATCAAATTAGCAA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAA
* * ** * * * * *
3162039 CGCCTCACTTGAGGAATTGGTATTTCTAATAGAGAGTTCATAATGAGAAGAACTCATCAGATAGG
454 TGCCTCACTTGAGGGATTGACATTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGA
3162104 GGGAGAAGAAGTTCATAATGAGAAG
518 GGGAGAAGAAGTTCATAATGAGAAG
* * *
3162129 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * * *
3162194 ACATTTCCAATTCAGAGTTCCTAAT--TAAGAAACCCAT-GACAGATGGAAAATAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAG-AACTCATCGACAGAGGGAGAAGAAGTTCATAAT
* * * * *
3162256 GAGAAGGAC-TGTTTGA-CTATTGCTAGATTCACAACACTTCGAATCAGTAATGCCTCGCTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
3162319 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAAC-CATCCGACA-A---AG-AGAAGTT
195 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
* * * **
3162378 CATAATGAGAAGAACTTGTTCAACCTATTACTAGATTCACAACACTTTGAATCAA-AACGTATCA
260 CATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCA
* * * * * *
3162442 CTTGAGGGTTTAACATTTCTAATAGAGAGTTCGTAATGAGAA-AACTTATCCGACAGAGGGAGAA
325 CTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAA
* * * * *
3162506 GAAGTTCATAATGAGAATAACTTGTTCGACCTATTACTAGATTCACAAAACTTTGAATTAGCAAT
390 GAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAAT
* * *
3162571 GCCTCACTTGAGGGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGACATA
455 GCCTCACTTGAGGGATTGACA-TTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGA
* *
3162636 GGGAGAAGAAGTTCCTAATGAGAAT
518 GGGAGAAGAAGTTCATAATGAGAAG
* * ** *
3162661 AACATGTTTGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
* * *
3162725 GACATTTCCAATGGAGAGTTCGTAATAAGAAGAAATCATCCGACAGAGGGAGAAGAAG-T--TAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * * ** **
3162787 TGAGAAGAAAATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTG
129 TGAGAAG-AACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTG
* * * *
3162852 AGGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATA
193 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-A
* * *
3162916 GTTCATAATGTGAAGAACTAGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACC
257 GTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCC
* * * * *
3162981 TCAATTGAGGGATTGAGATCTCCAATGGAGAGTTCCTAATGAGAA-AATCTCATCCTACAGACGG
322 TCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAA-CTCATCCGACAGAGGG
* * * * * * *
3163045 AGAAGAAGTTCATAATGAGATGAACATCTTCGACCTATTGCTAGATTTACAACAATTCTAATTAG
386 AGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAG
* * * * * * *
3163110 CAATACCTCGCTTTAGGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTTATCAGAC
451 CAATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGAC
* *
3163175 AGGGGGAGAAAAAGTTCATAATGAGAAG
515 AGAGGGAGAAGAAGTTCATAATGAGAAG
* * * ** *
3163203 AACTTGTTCGACCTATTTCTTA-ATTCATAACACATCGAATCAACAACGCCTCTGTTGAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
* ** * * * * * * *
3163267 GACATTTCTAATTCAGAGTTCTTAATGAAAAGAACCCATATGATAGAGGAAGAAGAAGTTCTTAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * ** ** **
3163332 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAATAATTTCTTGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * * * * *
3163397 GGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAGAGGGAGAAGTAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * ** *
3163462 TCATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAACACCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * * *
3163527 ACTTGAGGGATTGACATTTCTATTGGAGAGTTCCGAATGAGAAAAACTCATCCGACAGATGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* * ** * * *
3163592 AGAAGTTCATAATGAGATGAAATTG-TCGACCTATAT-CTAGATTCACAACAAAT-AATATTAGT
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTAT-TGCTAGATTCACAACACTTCGA-ATCAGC
* * * * * *
3163654 AATGCCT-AGCATGAGGAATTGAAATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCAGAT
452 AATGCCTCA-CTTGAGGGATTGACATTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGAC
* *
3163718 AGGGGGAGAATAAGTTCATAATGAGAAG
515 AGAGGGAGAAGAAGTTCATAATGAGAAG
* * * * *
3163746 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCAAATCAGCAACGCCTCACTTGAGGGACTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * *
3163811 ACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCAACAGAGAGAGAAGAAGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * ** * * *
3163876 TGAGAATAACTTATTCGACCTATTAATCGATTCAC-AAACTTCGAATCAACAATG-CTCGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * **
3163939 GGGATTAACATTT-CAAT-GAGAG-TCGTAA--AGAA-AACTCATATGACAGA-GG-GAAGAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * * * * *
3163996 TCATAATGAGAAGAACTTGTTTGACCTAGACATTTCTA-A-T-A-GAGAGTTCCTAATGAGA-AA
259 TCATAATGAGAAGAACTTGTTCGACCT----ATTGCTAGATTCACAACACTT-CGAATCA-ACAA
* * * * * ** ** **
3164056 CTCATCA--T-AGGG---G-GA----GAAT--A-AGTTCATAAT--GAAGAAACTTGTTTGACCT
318 CGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAG-AACTCATCCGACAG
** *** * ** * * ** *** * *
3164105 ATTG-CTTG-A-TTCACAACTTCG-A-ATC-AGCAACG-CCTCACTTGAGGGATTGAC--C-TTT
382 AGGGAGAAGAAGTTCATAA-TGAGAAGAACTTG-TTCGACCT-A-TTGCTAGATTCACAACACTT
* * * * * ** * *
3164160 C-AATGGAG-AGT-TCT-A-ATGA--GA-AGAACATCCGACAGAGGAGAAGAAGTTCAT-A-GAG
443 CGAAT-CAGCAATGCCTCACTTGAGGGATTG-ACAT--TTCA-ATG-G-AG-AGTTCCTAATGAG
** * * ** ** ** * ** *
3164215 AAGAACTTGTTCAACCTATTG-CTAG-A-TTCACAACACTTTGAATC
500 AAGAACTCATCCGACAGAGGGAGAAGAAGTTCA-TA-A-TGAGAA-G
** * * ** * * * * * * * *
3164259 AACAACGAATCG-CTTGAGGGTTTAACATTTCA-ATAGAGTTCCTAATGAA-AACTCATCCGAC-
1 AAC-TTG-TTCGACCT-ATTG-CT-AGA-TTCACA-ACACTT-CGAATCAACAACGCCT-C-ACT
* * * * * * * * *
3164320 AGAGGAGA-AGA-AGTTCATAATGAGAAAACTTGTTCGACCTATTAGATTCACAAAACTTTGAAT
56 TGAGG-GATTGACATTTC-CAATG-G-AGA---GTT---CCTAAT-GA--GA-AGAAC--T-CAT
**
3164383 CAGCAATGCCTCACTTGAGGGATTGACATTTTCTAATGGAGAGTTC-TAATGAGAAGAA--TCAT
104 C-G--A-----CA---GAGGGA--G---------AA--GA-AGTTCATAATGAGAAGAACTTGTT
** ** ** * * * *
3164445 CGACAGAGGGAGAAGAGTTCCTAATGAGAATAACTT-G-TTCGACCTATTGCTCGATTTACAACA
144 CGACCTATTG-CTAGA-TT-C-----ACAA-AACTTCGAATC-AGC-AATGC-C----T----CA
*** * * * * *
3164508 CTTCGAAATAACCTCACTTGAGGGATTAAATTTCCATGGAGAGTTCGTAATAAGAAGAACTCAT-
189 CTT-G-----A-GGGA-TTGA--CA-T---TTCCAATGGAGAGTTCCTAATGAGAAGAACTCATC
3164572 -G--AGA-GGAGAAGAAGTT-ATAATGAGAAGAAC-TGTT-GACCTATTGCTAGATTCACAACAC
240 CGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACAC
* **
3164630 TTCGAAT---GAACGCCTTGC-TGA-GGATTGACATTT-CAATGGAGAGTT-CTAAT--GAAGAA
305 TTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAA
* * *
3164686 --CATCTGACAGA-GAAGAAGTAG-T-A-AATGAGAAGAACTTGTTCGACCTATTGCT-GATTCA
370 CTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCA
*
3164744 CAACACTTCG-AT-A--AA-CCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
435 CAACACTTCGAATCAGCAATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGA
* *
3164804 GAA-AACTCATCCGACAGATGGAGAAGACGTTCAT-ATGAGAAG
499 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAG
* ** *
3164846 AACTTG-TCGACCTA-TGCTAGATTCAC-ACA--TCTAAT-TTCAACGCCTCGC-TGAGGG-TTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3164903 ACTTTTCTAATAGAGAGTTCCTAATGAGAAAAACTCATCAGATAG-GGGAGAAGAAGTT--TAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATC-GACAGAGGGAGAAGAAGTTCATAAT
* * * *
3164965 GAGAAGAACTTGTTCGACCTA-T-CTAGATTCACAATACTTCAAATCAGCAACG-CTCACCTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
** *
3165027 GGATTGA-ATTTCCAATTCAGAGTTTCCTAATG-GAAAGAACT-AT--GACAGA-GGAGAAAAAG
195 GGATTGACATTTCCAATGGAGAG-TTCCTAATGAG-AAGAACTCATCCGACAGAGGGAGAAGAAG
* * * * *
3165086 TTCATAAT--G-AGAATTTGTTTGA-CTATTGCTAGATTCAAAAAACACTTCGAATCAGCAATGC
258 TTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTC--ACAACACTTCGAATCAACAACGC
*
3165147 CTCGCTTGAGGGATTG--ATTT-C--T--AGAGTTCCTAAT--GAAGAACTCATCCG--AGA-GG
321 CTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGG
3165200 -G-AG-AGTTCATAATGAGAAGAACTTGTTCGACCTATT-CTA-ATTCACAACACTT-GAATCA-
386 AGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAG
* * *
3165258 -AA--CGTC-CTTGA--G---G---TTTC--T--A-A-----T--T-AGAAGAACGCATCTGACA
451 CAATGCCTCACTTGAGGGATTGACATTTCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
* * *
3165298 GAGGAAGAAGTAGCTCATAATGAGAAG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* * ** *
3165325 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3165390 ACATTTCCATTGGAGAGCTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * * *
3165455 GAGAAGAACTTG-TCGACCTATTGCTAGATTCACAACAA-ATCTAATTAGCAAAGCCTCGCTTGA
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAA-AACTTCGAATCAGCAATGCCTCACTTGA
* * * * * * *
3165518 GGAATTGACTTTTCTAATAGAGAGTTCCTAATGAGAAAAACTCATCAGATAG-GTGGAGAAGAAG
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAG-GGAGAAGAAG
* * * * *
3165582 TTCATAATGAGAAGAACTTGTTCGACCTATTACTTGATTCACAATACTTCAAATCAGCAACGCCT
258 TTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCT
* * ** * ** *
3165647 CACCTGAGGGATTGAGATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGA
323 CACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGA
* * * * *
3165711 CAAAAAGTTCATAATGAGAAGGATTTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAGC
387 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
* * ** *
3165776 AATGCCTCGCTTGAGGGATTGGCATTTCCAATAAAGAGTTCCTAATGAGAAGAATTCATCCGACA
452 AATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
*
3165841 GAGGGAGAAAAAGTTCATAATGAGAAG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* * * * ** * *
3165868 AACTTGTTCAACCTATTACTAGATTCACAACACTTTGAATCAATAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3165933 ACATTTCTAATAGAGAGTTCGTAATGAGAA-AATTTATCAGACAGAGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATC-GACAGAGGGAGAAGAAGTTCATAAT
* * * *
3165997 GAGAATAACTTGTTCGACCTATTACTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* ** * * * * * * * *
3166062 GGATTGACATTTCC-CTCAACACTT-CGAAT--CAACAACGCCT-C-ACTTGAGGGATTGACATT
195 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGAC-AGAGGGA--G--A--
* * ** * ** ** ** **
3166121 TCCAGTGGAGAGTTCGTAATAAGAAGAACTCATCCGACAGACGGAGAGAAGTT-A-ATA-A-TGA
253 ---A---GA-AGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAG-A-TTCACA-ACACTTC
* ** ** * *** * * * ** * * * **
3166182 GAA-GAA-ATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGAG
308 GAATCAACAACGCCTCA-C--TTGAGGGATT---GACATTTCCAATGGAGAGTTCC-T-AATGAG
* * * * * * * ** * *** **
3166245 -TG-ATTGCCATTTC--TA-A-TG-G-AG-AGTTTATAATGAGAATAACTCATCCGAAAGAGGGA
365 AAGAACT--CA-TCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTG-
** * * * * * *** * *
3166301 GAAGTAGTTCA-TA-A-TGT-GAA-GAAC-TTG-TTCGACCTATTGCTAGATTCACAACACTTCG
426 CTAG-A-TTCACAACACT-TCGAATCAGCAATGCCTC-A-C--TTGAGGGATT---GACATTTC-
** * *** * * * * * *
3166359 AATCAACAACACCTCACTTGAG--GGATTGACATTTC--CA-A-TG-G-AG-AGTTCCTAATGAG
480 AATGGAGAGTTCCT-A-ATGAGAAGAACT--CA-TCCGACAGAGGGAGAAGAAGTTCATAATGAG
*
3166415 AAA
540 AAG
* ** ** * * * * * * *** * **
3166418 AAC----TC-A--T-CTGAAAGATGGAGAAGAAGTTCATAATGAGAAGAACTTGTCGACCT-ATT
1 AACTTGTTCGACCTATTGCTAGATTCACAA-CACTTC-GAAT--CAACAACGCCTC-ACTTGAGG
* * * ** * * * * * * * ** *
3166474 GCTT-A-A-TT-C-AT-AACACAT-CGAAT--CAACAACGCCTC-TCTTGAGGGA-TTGACATTT
61 GATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCGAC-AGAGGGAGAAGA-AGTT
* ** *** * *** * * *
3166528 C-TAATTCAG-AGTTCTTAATGAAAAGAACCCATATGAC-AGAGGGAGAAGAATTTCTTAATGAT
124 CATAA-TGAGAAGAAC-T--TG-TTCG-ACCTAT-TG-CTAGATTCACAA-AACTTC--GA--AT
* * *** * * * * * *
3166590 AAG-AACTTG-TTCGACCTATTGCTAGATTCATAATACTTCGAATGAACAATGCATTGCT--TGA
176 CAGCAA--TGCCTC-A-C--TTGAGGGATTGA-CAT--TTCCAATGGA-GA-G--TTCCTAATGA
* ** * * ** * *
3166651 GGGATTGCCATTTTCAAT-GGAGAGTTTCTAATGAGAAGAACGCATC-TGACAGTGAG-AGAAGT
228 --GA-AG--A-ACTC-ATCCGACAG-----AGGGAGAAGAA-G-TTCAT-A-A-TGAGAAGAACT
* *** * * *
3166713 AGTTCATAATGAGAAGAACTTGTTCAACCTATTGCTAGATTCATAACACTTTGAATCAACAACGA
276 TGTTC-------GACCTA-TTG--C----------TAGATTCACAACACTTCGAATCAACAACGC
* * * * * * *
3166778 ATCGCTTGAGGGTTTAATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGG
321 CTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGG
* * * * * * *
3166842 AGAAGAAGTTCATGATGAGAATAACTTGTTCGACCTATTGCTAGATTAATAAAACTTTGATTCAG
386 AGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAG
** * * *
3166907 CACCGCCTCACTTGAGGGATTGACATTTTCTAATAGAGAGTTCTTAATGAGAAGAATTCATCCGA
451 CAATGCCTCACTTGAGGGATTGACA-TTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
* * *
3166972 CAGAGAGAGAAGAAGTTCCTAATGAGAAT
514 CAGAGGGAGAAGAAGTTCATAATGAGAAG
** * * * *
3167001 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAACAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3167066 ACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATATGACAGAGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * **
3167131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * * * * * * *
3167196 GGATTGCCATTTTCAATGGAGAGTTTCTAACT-AGAAGAACGCATCTGACAGAGGAAGAAGTAGC
195 GGATTGACATTTCCAATGGAGAGTTCCTAA-TGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * ** *
3167260 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCAAATTAGTAACACCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * *
3167325 ACTTGAGGGATTGACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCAACAGATGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
** * **
3167390 AGAAGTTCATAATGAGAAGAACTTG-TCGACCTATTGCTAGATTCACAACAAATCAAATTTGCAA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAA
* * * * * * * *
3167454 AGCCTCGCTTGAGGAATTGACATTTCTAATAGAAAGTTCCTAATGAGAAGAACTCATCGGATAGG
454 TGCCTCACTTGAGGGATTGACATTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGA
*
3167519 GGGAGAAGAAGTTCATTATGAGAAG
518 GGGAGAAGAAGTTCATAATGAGAAG
* * * * *
3167544 AACTTGTTCGACCTATTACTTGATTCACAATACTTCGAATCAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * * * *
3167609 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCAAAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* *
3167673 TGAGAATG-ACTTGTTTGACCTATTTCTAGATTCACAATAA-TTCGAATCAGCAATGCCTCACTT
129 TGAGAA-GAACTTGTTCGACCTATTGCTAGATTCACAA-AACTTCGAATCAGCAATGCCTCACTT
* *
3167736 GAGGGATTGACATTTCGAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAA
192 GAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAA
* * * **
3167801 GTTCATAATGAGAAGAACTTGTTCAACCTATTGCTAGATTCATAACACTTTGAATCAACAACGAA
257 GTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCC
* * * * * *
3167866 TCGCTTGAGGGTTTAATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGA
322 TCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGA
* * * * * *
3167930 GAAGAAGTTCATGATGAGAATAACTTGTTCGACCTATTTCTAGATTCATAAAACTTTGAATCAGC
387 GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
* * *
3167995 AACGCCTCACTTGAGGGATTGACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCGAC
452 AATGCCTCACTTGAGGGATTGACA-TTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGAC
* * *
3168060 AGAGAGAGAAGAAGTTCCTAATGAGAAT
515 AGAGGGAGAAGAAGTTCATAATGAGAAG
** * * * *
3168088 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAACAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3168153 ACATTTCCAATGGAGAGTTCATAATAAGAAGAACTCATATGACAGAGGGAGAAGACA-TTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGA-AGTTCATAA
* * * **
3168217 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * * * * * * * * *
3168282 GGGATTGCCATTTTCAATAGAGAGTTTCTAATTAGAAGAACGCATCTGACAGAGGAAGAAGTAGC
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * ** *
3168347 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCAAATTAGTAACACCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * * *
3168412 ACTTGAGGGATTGACATTTCCATTAGAGAGTTCCTAATGAGAAAAACTCATCCAACAGATGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
** *
3168477 AGAAGTTCATAATGAGAAGAACTTG-TCGACCTATTGCTAGATTCACAACAAATC-AATTTAGCA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAA-TCAGCA
* * * * * *
3168540 AAGCCTCGCTTGAGGAATTGACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCGGATAG
453 ATGCCTCACTTGAGGGATTGACATTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
* *
3168605 GGGGAGAAGAAGTTCATTATGAGAAG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * * *
3168631 AACTTGTTCGACCTATTACTTGATTCACAATACTTCGAATCAGCAATC-CCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAA-CGCCTCACTTGAGGGATT
** * * * * * *
3168695 GACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGTTCAAA
65 GACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATA
* *
3168759 ATGAGAATG-ACTTGTTTGACCTATTTCTAGATTCACAACAA-TTCGAATCAGCAATGCCTCACT
128 ATGAGAA-GAACTTGTTCGACCTATTGCTAGATTCACAA-AACTTCGAATCAGCAATGCCTCACT
* *
3168822 TGAGGGATTGACATTTCGAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAA
191 TGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA
* * * *
3168887 AGTTCATAATGAGAAGAACTTGTTCAACCTATTGCTAGATTCATAACACTTTGAATCAACAACGA
256 AGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGC
* * * * * * *
3168952 ATCGCTTGAGGGTTTAATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGG
321 CTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGG
* * * * * * *
3169016 AGAAGAAGTTCATGATGAGAATAACTTGTTTGACCTATTTCTAGATTCAAAAAACTTTGAATCAG
386 AGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAG
*
3169081 CAACGCCTCACTTGAGGGATTGACATTTTCTAATGGAGAGTT-CT--T-------A---AT----
451 CAATGCCTCACTTGAGGGATTGACA-TTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
* *
3169129 ------GAGAAGAAGTTCCTAATGAGAAT
514 CAGAGGGAGAAGAAGTTCATAATGAGAAG
** * * * *
3169152 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAACAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3169217 ACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATATGACAGAGGGAGAAGACGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * **
3169282 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * * * * * * * *
3169347 GGATTGCCATTTTCAATGGAGAGTTTCTAATTAGAAGAACGCATCTGACAGAGGAAGAAGTAGCT
195 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
* * * ** *
3169412 CATAACGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCAAATTAGTAACACCTCA
260 CATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCA
* * * *
3169477 CTTGAGGGATTGACATTTCCATTGGAGAATTCCTAATGAGAAAAACTCATCCGACAGATGGAGAA
325 CTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAA
* * * * ** * * *
3169542 GAAGTTCATAAAGAGTAGAAC-TGGTCGACCTATTGCTATATTCACAACAAAT-AATATTAGTAA
390 GAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGA-ATCAGCAA
* * * * * * * *
3169605 CGCCTCGCTTGAGGAATTGACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTAATCAGATATA
454 TGCCTCACTTGAGGGATTGACATTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGA
3169670 GGGAGAAGAAGTTCATAATGAGAAG
518 GGGAGAAGAAGTTCATAATGAGAAG
* * * * *
3169695 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCAAATCAGCAACGCCTCACTTGAGGTATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * * * *
3169760 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGAATAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * * * * * *
3169824 AGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACACTTCAAATCAGTAATGCCTCGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * *
3169889 GGGATTGACATATCCAATAGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * **
3169954 TCATAATGAGAAGAACTTGTTCAACCTATTACTAGATTCACAACACTTTGAATCAACAACGTATC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * * * *
3170019 ACTTGAGGGTTTAACATTTCTAATAGAGAGTTCGTAATGAGAA-AACTTATCCGACAGAGGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
** * * * * *
3170083 AGAAGTTCATAGCGAGAATAACTTGTTCGACCTATTACTAGATTCACAAAACTTTGAATTAGCAA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAA
* * *
3170148 TGCCTCACTTGAGGGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAATAACTCATTCGACAG
454 TGCCTCACTTGAGGGATTGACA-TTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
* *
3170213 AGGGAGAAGAAGTTCCTAATGAGAAT
517 AGGGAGAAGAAGTTCATAATGAGAAG
* ** *
3170239 AACATGTTCGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
* * *
3170303 GACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTAATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAA
* * * ** **
3170368 TGAGAAGAAATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
* * * * *
3170433 GGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAAGTAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * * * * * *
3170498 TTATAATGTGAAGAACTTGTTCGACCTATTGCTAGATTTACAACAATTCTAATTAGCAACACCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * * * *
3170563 GCTTTAGGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTTATCAGACAGAGGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* * * *
3170628 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTGTTGCTTA-ATTCATAACACATCGAATCAACA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAGCA
* * * ** * * * * **
3170692 ACGCCTCTCTTGAGAGATTGACATTTCTAATTTAGAGTTCTTAATGAAAATAACCCATATGACAG
453 ATGCCTCACTTGAGGGATTGACATTTC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
*
3170757 AGGGAGAAGAAGTTCTTAATGAGAAG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * * * **
3170783 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCATTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * * *
3170848 CCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAAAGAGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATC-GACAGAGGGAGAAGAAGTTCATAAT
* * ** * ** *
3170913 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTTGAATCAATAACGAATCAATTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * * * * *
3170978 GGTTTAATATTTCCAATAGAGAGTTCCTAATGTGAA-AATTCATCCGACAGAGGGAGAAGAAGTT
195 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
* * * * *
3171042 CATGATGAGAATAACTTGTTCGACCTATTGCTAGATTCATAAAACTTTGAATCAGA-AACGCCTC
260 CATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA-ACAACGCCTC
* * * * * *
3171106 ACTTGAGGGACTAACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCACCCGACAGAGAGAG
324 ACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAG-G-G
* * **
3171171 AGAAGAAGTTCCTAATGAGAATAACTTGTTCGACCTATTAATCA-ATTCACAACACTTCGAATCA
386 AGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCT-AGATTCACAACACTTCGAATCA
* * * * * * **
3171235 ACAATGCCTCGCTTGAGGGATTAATATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATATGA
450 GCAATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3171300 CAGAGGGAGAAGAAGTTCATAATGAGAAG
514 CAGAGGGAGAAGAAGTTCATAATGAGAAG
* * * * * *** **
3171329 AACTTGTTTGACCTATTGTTAGATTCACAATACTTCGAATGAGCAATTTCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * * *
3171394 CCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAAAGAGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATC-GACAGAGGGAGAAGAAGTTCATAAT
* * ** * ** *
3171459 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTTGAATCAATAACGAATCAATTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * * * * *
3171524 GGTTTAATATTTCCAATAGAGAGTTCCTAATGTGAA-AATTCATCCGACAGAGGGAGAAGAAGTT
195 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
* * * * *
3171588 CATGATGAGAATAACTTGTTCGACCTATTGCTAGATTCATAAAACTTTGAATCAGA-AACGCCTC
260 CATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA-ACAACGCCTC
* * * * * * *
3171652 ACTTGAGGGACTAACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCACCCGACAGAGAGAG
324 ACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAG
* * ** *
3171717 AAGAAGTTCCTAATGAGAATAACTTGTTCGACCTATTAATCA-ATTCACAACACTTCGAATCAAC
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCT-AGATTCACAACACTTCGAATCAGC
* * * * * **
3171781 AATGCCTCGCTTGAGGGATTAATATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATATGACA
452 AATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA
3171846 GAGGGAGAAGAAGTTCATAATGAGAAG
516 GAGGGAGAAGAAGTTCATAATGAGAAG
* * * * **
3171873 AACTTGTTTGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * * ** *
3171938 CCATTTTCAATGGAGAGTTTCTAATTAGAAGAACGCATCTGACAGAGGAAGAATTAGCTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATC-GACAGAGGGAGAAGAAGTTCATAAT
* * * * * * **
3172003 GAGACGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * * *
3172068 GGATTGACATTTCCATTGGAGAGTTCCTAATGAGAAAAACACATCCGACAGATGGAGAAGAAGTT
195 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
* * * *
3172133 CATAATGAGAAGAACTTG-TCGACCTATTGCTAGATTCACAACAAC-TCAAATTAGCAAAGCCTC
260 CATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAC-ACTTCGAATCAACAACGCCTC
* * * * * * * *
3172196 GCTTGAGGAATTGACATTTCTAATAGAGAGTTCCTAATGAGAAAAACTCATCAGATAGGGGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* * * * *
3172261 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTTGATTCACAATACTTCAAATCAGTAA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAA
* ** * * **
3172326 CGCCTCACTTGAGGGATTGACATTTCCAATTCAGAGATCCTAATGTA-AAGAACCCATATGACAG
454 TGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAG
* * *
3172390 ATGGACAATAAGTTCATAATGAGAAG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * * * *
3172416 GACTTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * ** * * *
3172481 CCATTTCAAATAAAGAGTTCCTAATGAGAAGAATTCATCCGACTGAGGGAGAAAAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * * * * **
3172546 GAGAAGAACTTGTTCAACCTATTACTAGATTCACAACACTTAGAATCAACAACGTATCACTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * * * * * *
3172611 GGTTTAACATTTCTAATAGAGAGTTCGTAATGAGAA-AATTTATCCGACAGAGGGAGAAGAAGTT
195 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
* * * * * * * *
3172675 CATAATGAGAATAACTTGTTCGACCTATTACTAGATTCACAAAACTTTGAATTAGCAATGCATCA
260 CATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCA
* * * * * * *
3172740 CTTGAGGGATTGATATTTTCTAATAGCGAGTTCCTATTGAGAATAACTCATTCGACAGAGGGAGA
325 CTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* * * * ** * *
3172805 AGAAGTTCCTAATGAAAATAACATGTTCGACCTATTAATCGAATT-ACAACACTTCGAATCAACA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGCA
* * * *
3172869 ACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCGTAGTAAGAAGAACTCATCCGACAG
453 ATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
*
3172934 AGGGAGAAGAAGTTAATAATGAGAAG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * * * * **
3172960 AAATTGTTTGACCTATTGCTAGATTCACAACACTTTGAATCAATAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * * *
3173025 CCATTTCCAATGGAGAGTTTCTAATGACAATAACTCATCCAAAAGAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * **
3173090 GTGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCACTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * *
3173155 GGATTGACATTTCCAATAGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTT
195 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
* *
3173220 CATAATGAGAAGAACTTG-TCGACCTATTGCTTA-ATTCATAACACATCGAATCAACAACGCCTC
260 CATAATGAGAAGAACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCTC
* * * ** * * * **
3173283 TCTTGAGGGATTGTCATTTCTAATTCAGAGTTCTTAATGAAAAGAACCCATATGACAGAGGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* * * * *
3173348 AGAAGTTCTTAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCATAATACTTCGAATGAACAA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAA
* ** * * * * *
3173413 TGCATTGCTTGAGGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAGT
454 TGCCTCACTTGAGGGATTGACA-TTTCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGA
* *
3173478 GAGAGAAGTAGTTCATAATGAGAAG
518 GGGAGAAGAAGTTCATAATGAGAAG
* * * *** * * *
3173503 AACTTGTTCAACCTATTGCTAGATTCATAACACTTTGAATCAACAACAAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3173568 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * * *
3173632 GAGAATAACTTGTTCGACCTATTGCTAGATTAATAAAACTTTGAATCAGCAACGCCTCACTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * * * *
3173697 GGATTGACATTTTCTAATAGAGAGTTCTTAATGAGAAGAATTCATCCGACAGAGAGAGAAGAAGT
195 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * ** * *
3173762 TCCTAATGAGAATAACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAACAATGCCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * * * **
3173827 GCTTGAGGGATTAACATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATATGACAGAGGGAGA
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGA
* *
3173892 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATCAACAA
389 AGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAA
** * * * * * *
3173957 TGCCTTGCTTGAAGGATTGTCATTTTCAATGGAGAGTTTCTAATTAGAAGAACACATCTGACAGA
454 TGCCTCACTTGAGGGATTGACA-TTTCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGA
* *
3174022 GGAAGAAGTAGTTCATAATGAGAAG
518 GGGAGAAGAAGTTCATAATGAGAAG
* * ** *
3174047 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * ** * *
3174112 ACATTTCCATTGGAGAGTTCCTAATGGGAAAAACTCATACGACAGATGTTGAATAAGTTAATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * * *
3174177 GAGAAGAACTTG-TCGACCTATTGCTAGATTCACAACAA-ATCAAATTAGCAAGGCCTCGCTTGA
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAA-AACTTCGAATCAGCAATGCCTCACTTGA
* * * * * * * *
3174240 GGAATTGACATTTCTAATAGAGAGTTCCTAATGAGAATAACTTATCAGATAGGGGGAGAAGAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * * *
3174305 TCATAATGAGAAGAACTTGTTTGACCTATTGCTTGATTCACAATACTTCAAATCAGCAACGCCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* ** * ** * *
3174370 ACTTGAGGGATTGATATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGAC
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAG
* * * *
3174434 AATAAGTTCATAATGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAGTA
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCA
* *
3174499 ATGCCTCGCTTGAGGGATTGACATTTCCAATGGAGTGTTCCTAATGAGAAGAACTCATCCGACAG
453 ATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
* *
3174564 AGGGAGAAAAACTTCATAATGAGAAG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * * ** * *
3174590 AACTTGTTCAACCTATTACTAGATTCACAACACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3174655 ACATTTCTAATAGAGAGTTCGTAATGAGAA-AACTTATCCGACAGAGGGAGAAGAAATTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * *
3174719 GAGAATAACTTGTTCGACCTATTACTAGATTCACAAAACTTTGAATCAGCAACGCCTCACTTGAG
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAG
* * * *
3174784 GGATTGATATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGACAGAGGGAGAAGAAGT
195 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * ** *
3174849 TCCTAATGAGAATAACATGTTCGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCT
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAACAACGCCT
* * *
3174913 CACTTGAGGGATTGAAATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGGGAG
323 CACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAG
* * * * **
3174978 AAGAAGTTAATAATGATAAGAACTTGTTTGACCTATTGCTAGATTCACAACACTTTGAATCAATA
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCA
** * ** *
3175043 ATGCCTTGCTTGAGGGATTGCCATTTCCAATGGAGAGTTTGTAATGAGAATAACTCATCCGACAG
453 ATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
*
3175108 AGGGAGAAGTAGTTCATAATGAGAAG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * *
3175134 AACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* *
3175199 ACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGAGAAGAAGTTCATAAT
* * * * * * *
3175264 GAGAAGAACTTCTTCGACCTATTGCTAGATTTACAACAA-TTCTAATTAGAAATGCCTCGCTTTA
130 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAA-AACTTCGAATCAGCAATGCCTCACTTGA
* * * *
3175328 GGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCAGACAGGGGGAGAAGAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* *
3175393 TCATAATTAGAAGAACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAATCAACAACGCCT
259 TCATAATGAGAAGAACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCT
* * ** * * * ** *
3175457 CTCTTGAGAGATTGACATTTCCAATTCAGAGTTCTTAATGAAAAGAACCCATATGGCAGAGGGAG
323 CACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAG
* * *
3175522 AAGAAGTTCTTAATGAGAAGAACTTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAGCA
388 AAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCA
* * * *
3175587 ACGCCTCTCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAAAAGAACTCATCTGACAG
453 ATGCCTCACTTGAGGGATTGACATTT-CAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAG
*
3175652 AGGGAGAAGAGGTTCATAATGAGAAG
517 AGGGAGAAGAAGTTCATAATGAGAAG
* * * ** *
3175678 AACTTGTTCGACTTATTACTAGATTCACAACTCTTTAAATCAACAACGCCTCACTTGGGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3175743 ATATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATATGAAAGAGGGAGGAA-AAGTTCTTAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGACAGAGGGA-GAAGAAGTTCATAA
* * ** * * *
3175807 TGAGAAGAAATTGTTTGACCTATTGCTCTATTCACAAAACTTCGAATCAGCAACGCTTCGCTTGA
129 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGA
*
3175872 GGGATTGACATTTCCAATGGAAAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
194 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * * * * * *
3175937 CCATAATGAAAATAACTTGTTCGACCTATTGCTATATTAATAACACTTCGAATCAACAACACCTC
259 TCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTC
* * * * * * *
3176002 ACTTGAGGGACTAACATTTCTAGTAGAGAGCTCATAATGAGAAGAAC
324 ACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAAC
3176049 CCATAGCTTG
Statistics
Matches: 25065, Mismatches: 4193, Indels: 1769
0.81 0.14 0.06
Matches are distributed among these distances:
477 4 0.00
478 25 0.00
479 14 0.00
480 9 0.00
481 12 0.00
482 3 0.00
484 5 0.00
485 9 0.00
486 7 0.00
487 40 0.00
488 14 0.00
489 8 0.00
490 18 0.00
491 26 0.00
492 30 0.00
493 14 0.00
494 1 0.00
495 4 0.00
496 17 0.00
497 1 0.00
498 53 0.00
499 53 0.00
500 60 0.00
501 64 0.00
502 2 0.00
503 6 0.00
504 13 0.00
505 19 0.00
506 7 0.00
507 11 0.00
508 1 0.00
509 11 0.00
510 5 0.00
511 8 0.00
512 20 0.00
513 43 0.00
514 16 0.00
515 23 0.00
516 12 0.00
517 16 0.00
518 61 0.00
519 183 0.01
520 91 0.00
521 450 0.02
522 47 0.00
523 167 0.01
524 244 0.01
525 52 0.00
526 42 0.00
527 92 0.00
528 155 0.01
529 173 0.01
530 125 0.00
531 176 0.01
532 247 0.01
533 123 0.00
534 106 0.00
535 435 0.02
536 264 0.01
537 95 0.00
538 580 0.02
539 175 0.01
540 121 0.00
541 290 0.01
542 1768 0.07
543 7268 0.29
544 8127 0.32
545 1155 0.05
546 629 0.03
547 17 0.00
548 10 0.00
549 6 0.00
550 47 0.00
551 55 0.00
552 8 0.00
553 9 0.00
554 46 0.00
555 12 0.00
556 30 0.00
557 12 0.00
558 6 0.00
559 4 0.00
560 5 0.00
561 8 0.00
562 13 0.00
563 12 0.00
564 20 0.00
565 9 0.00
566 4 0.00
567 9 0.00
568 5 0.00
569 3 0.00
570 3 0.00
571 4 0.00
572 9 0.00
573 8 0.00
574 12 0.00
575 5 0.00
576 20 0.00
577 11 0.00
578 12 0.00
579 37 0.00
580 18 0.00
581 20 0.00
582 45 0.00
583 33 0.00
584 21 0.00
585 13 0.00
586 7 0.00
587 24 0.00
588 26 0.00
589 39 0.00
590 47 0.00
591 48 0.00
592 31 0.00
593 20 0.00
594 21 0.00
595 6 0.00
596 7 0.00
597 14 0.00
598 9 0.00
ACGTcount: A:0.36, C:0.17, G:0.20, T:0.27
Consensus pattern (542 bp):
AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCGACAGAGGGAGAAGAAGTTCATAATG
AGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAATGCCTCACTTGAGG
GATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTC
ATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCAC
TTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAG
AAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATG
CCTCACTTGAGGGATTGACATTTCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGG
AGAAGAAGTTCATAATGAGAAG
Found at i:3152841 original size:272 final size:272
Alignment explanation
Indices: 3145362--3169136 Score: 22006
Period size: 272 Copynumber: 87.9 Consensus size: 272
3145352 ATTTCTGAAT
* * * * * * *
3145362 AACTTGTTCGACCTATTACTAGATTCATAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3145427 ACATTTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATTC-GATAGAGGGAGAAGAAGTTCCTA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCA-TCAGACAGAGGGAGAAGAAGTTCATA
* * ** * ** *
3145491 ATGAGAATAACATGTTCGACCTATTAATCGAATT-ACAACACTTCGAATCAATAACGCCTCACTT
129 ATGAGAAGAACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGCAATGCCTCACTT
* * * *
3145555 GAGGGATTAACATTTCCAATGGAGAGTAT-GTAATAAGAAGAACTCATCCGATAGAGGGAGAAGA
193 GAGGGATTGACATTTCCAATGGAGAGT-TCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA
* *
3145619 TGTTAATAATGAGAAG
257 AGTTCATAATGAGAAG
* * * * **
3145635 AAATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3145700 CCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCA-AAAGAGGGAGAAGTAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CAGACAGAGGGAGAAGAAGTTCATAA
* ** **
3145764 TGTGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAATAACACCTCACTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * *
3145829 GGGATTGACATCTCCAATGGAGAGTTTCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGT
195 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
3145894 TCATAATGAGAAG
260 TCATAATGAGAAG
* * * ** ** * *
3145907 AACTTGTTCAACCTATTGCTAGATTCACAACACTTTGATTCAACAACGAATTGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * ** *
3145972 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCTACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * * ** *
3146036 GAGAATAACTTGTTTGACCTATTGCTAGATTCATAAAACTTTAAATCAGCAATGCCTCACATGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * *
3146101 GGATTGACATTTTCTAATGGAAAGTTCTTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
196 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * *
3146166 TCCTAATGAGGAT
260 TCATAATGAGAAG
** * * * * *
3146179 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAATAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3146244 AAATTTCCAATGGAGAGTTCGC-AATAAGAAGAACTCAT-ATGACAAAGGGAGAAGAAGTTCATA
66 ACATTTCCAATGGAGAGTTC-CTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * ** *
3146307 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAATAATGCCTTACTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * *
3146372 AGGGATTGCCATATT-CAATGGAGAGTTTCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAA
194 AGGGATTGACAT-TTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAA
3146436 GTTCATAATGAGAAG
258 GTTCATAATGAGAAG
* * * ** * * *
3146451 AACTTGTTCAACCTATTGCTAGATTCACAACACTTTGAATCAACAATGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3146516 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * **
3146580 GAGAATAACTTGTTCGACCTATTGCTAGATTCATAAAACTTTAAATCAGCAATGCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * *
3146645 GGATTGACATTTTCTAATGGAAAGTTCTTAATGAGAAGAACTCATCTGACAGAGGGAGAAGAAGT
196 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* *
3146710 TCCTAATGAGAAT
260 TCATAATGAGAAG
** * * * * *
3146723 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAATAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* *
3146788 ACATTTCCAATGGAGAGTTCGC-AATAAGAAGAACTCAT-ATGACAAAGGGAGAAGAAGTTCATA
66 ACATTTCCAATGGAGAGTTC-CTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * * **
3146851 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * * *
3146916 AGGGATTGCCATATT-CAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAAAGGGAGAAGTA
194 AGGGATTGACAT-TTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAA
3146980 GTTCATAATGAGAAG
258 GTTCATAATGAGAAG
* * * * **
3146995 AACTTGTTCGACCTATTTCTAGATTCACAACAGTTCAAATTAGTAA-GACCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACG-CCTCACTTGAGGGATT
* * *
3147059 GACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAA
* * * ** * * *
3147124 TGAGAATAACTTG-TCAAACTATTGCTAGATTCACAACAAATCAAATTAGTAATGCCTCACTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * * * * * *
3147188 GGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAGCTCATCAGATAGGGGGAGAAGAATT
195 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
3147253 TCATAATGAGAAG
260 TCATAATGAGAAG
* * * * *
3147266 AACTTGTTCGACCTATTGCTTGATACACAATACTTCGAATTAGCAACG-CTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * *
3147330 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCAT-ATGACAGATGGACAATAAGTTCATA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * * *
3147393 ATGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATCAGCAATGCCTCGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
*
3147458 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3147523 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * * ** * * *
3147537 AACTTGTTCAACCTATTGCTAGATTCATAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3147602 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * * * *
3147666 GAGAATAACTTGTTCGACCTATTTCTAGATTCATAAAACTTTGAATCAGCAACGCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * *
3147731 GGATTGACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCGACAGAGAGAGAAGAAGT
196 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* *
3147796 TCCTAATGAGAAT
260 TCATAATGAGAAG
** * * * *
3147809 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAACAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* *
3147874 ACATTTCCAATGGAGAGTTCGC-AATAAGAAGAACTCAT-ATGACAAAGGGAGAAGAAGTTCATA
66 ACATTTCCAATGGAGAGTTC-CTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * * **
3147937 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * * *
3148002 AGGGATTGCCATATT-CAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAAAGGGAGAAGTA
194 AGGGATTGACAT-TTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAA
3148066 GTTCATAATGAGAAG
258 GTTCATAATGAGAAG
* * * * **
3148081 AACTTGTTCGACCTATTTCTAGATTCACAACAGTTCAAATTAGTAA-GACCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACG-CCTCACTTGAGGGATT
* * *
3148145 GACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAA
* * * ** * * *
3148210 TGAGAATAACTTG-TCAAACTATTGCTAGATTCACAACAAATCAAATTAGTAATGCCTCACTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * * * * * *
3148274 GGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAGCTCATCAGATAGGGGGAGAAGAATT
195 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
3148339 TCATAATGAGAAG
260 TCATAATGAGAAG
* * * * *
3148352 AACTTGTTCGACCTATTGCTTGATACACAATACTTCGAATTAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * *
3148417 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCAT-ATGACAGATGGACAATAAGTTCATA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * *
3148480 ATGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
*
3148545 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
*
3148610 TTTATAATGAGAAG
259 TTCATAATGAGAAG
* * * * * * ** * *
3148624 AACTTGTTCAACCTATTACTATATTCATAATACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * ** * * *
3148689 ACATTTCTAATAGAGAGTTTGTAATGAGAA-AACTTATCCGACAGAGGGAGAAAAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* ** * * * * * * *
3148753 GAGAATAACTTGTTCGGTCGATTACTAGATTCACAAAACTTTGAATTAGTAATACCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * * *
3148818 GGATTGACATTTTCTAATAGAGAGTTACTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAGT
196 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* *
3148883 TCCTAACGAG-AG
260 TCATAATGAGAAG
* * * ** *
3148895 TAACATATTCAACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
1 -AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
* * * * * * *
3148959 TGGCATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGCGAGAAGAAGTTAATA
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATA
* * * ** **
3149024 ATGAGAAGAAATTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * *
3149089 AGGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATA
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-A
*
3149153 GTTCATAATGTGAAG
258 GTTCATAATGAGAAG
* *
3149168 AAATTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3149233 ACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* ** * * * * * * *
3149298 GAGAAGAACTTCTTCGAGTTATTGCTAGATTTACAACAATTCTAATTAGCAACGCCTCGCTTTA-
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * * * *
3149362 GGAAT-ACATTTCCAATAGAGAGTTCCTAATAAGAAGAACTTATCAGACAGGGGGAGAAGAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
3149426 CATAATGAGAAG
261 CATAATGAGAAG
* * * *
3149438 AACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAATCAACAACGCCTCTCTTAAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
** * * * * * *
3149502 GACATTTCCAATTCAGAGTTCTTAATGAAAAGAACCCAT-ATGGCAGAGGAAGAAGAAGTTCTTA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * * * ** **
3149566 ATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAATACTTCGAATGAACAATTTCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * * *
3149631 AGGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAGAGGGAGAAGTAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3149696 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * * ** *
3149710 AACTTGTTCGACCTATTGTTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3149775 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * ** * * * * *
3149840 GAGAAGAAATT-TTTGACCAATTGCTAGATTCACAACAAATCAAATTAGCAACGCCTCGCATGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * * * * *
3149904 GAATTGACATTTCTAATAGAGAGTTCCAAATGAGAAGAACTCATCAGATAGGGGGAGAAGAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
*
3149969 CATTATGAGAAG
261 CATAATGAGAAG
* * *
3149981 AACTTGTTCGACCTATTGCTTGATTCACAAAACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * * *
3150046 ACA-TTCCAAATTCAGAGTTCCAAATGTA-AAGAACCCAT-ATGACAGATGGACAATAAGTTCAT
66 ACATTTCC-AATGGAGAGTTCCTAATG-AGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCAT
* * * *
3150108 AATGAGAATG-ATTTGTTTGACCTATTACTAGATTCACAACAATTCGAATCAGCAATGCCTCACT
128 AATGAGAA-GAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACT
* * * *
3150172 TGAGGGATTGACATTTCCAATGGAGAGTTCGTAATGAGAAGAACTCATCCGATAGAGGGACAAAA
192 TGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA
3150237 AGTTCATAATGAGAAG
257 AGTTCATAATGAGAAG
* * * * * ** * * *
3150253 AACTTGTTCAAGCTATTACTAGATTCATAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * * * *
3150318 ATATTTCCAATAGAGAGTTTCGAACGTGAA-AACTCATTC-GACAGAGAGAGAAGAAGTTCATGA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCA-TCAGACAGAGGGAGAAGAAGTTCATAA
* * * * * *
3150381 TGAGAATAACTTGTTCGACCTATTTCTAGATTCATAAAACTTTGAATCAGCGATGCCTCACTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * * *
3150446 GGGATTGATATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCGACAGAGGGAGAAGAAG
195 GGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
* *
3150511 TTCCTAATGAGAAT
259 TTCATAATGAGAAG
** * * * *
3150525 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAACAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3150590 ACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCAT-ATGACAGAGGGAGACGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATAA
* * * **
3150654 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * * * * * * * * *
3150719 GGGATTGCCATTTTCAATGGAGAGTTTCTAATTAGAGGAACGCATCTGACAGAGGAAGAAGTAGC
195 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
3150784 TCATAATGAGAAG
260 TCATAATGAGAAG
* * * ** *
3150797 AACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3150862 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACCCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * ** ** * *
3150927 GAGAAGAACTTG-TCGACCTATTGCTAAATTCACAATAAATAAAATTAGCAACGCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * ** * * * *
3150991 GAATTTACATTTCTAATAAAGAGTTCCTAATGCGAAGAACTCATCAGATAGGGGGAGAAGAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
3151056 CATAATGAGAAG
261 CATAATGAGAAG
* * *
3151068 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * *
3151133 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCAT-ATGACAGATGGATAATAAGTTCATA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * * * *
3151196 ATGAGAAGGACCTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAGTAATGCCTCGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* *
3151261 AGGGATTGATATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGATAAGAAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3151326 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * * **
3151340 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * * * *
3151405 CCATTTTCAATGGAGATTTTCTAATGAGAAGAACGCATCTGACAAAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * *
3151470 GAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAA-GACCTCACTTGA
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATG-CCTCACTTGA
* * *
3151534 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAAAAGT
195 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
3151599 TCATAATGAGAAG
260 TCATAATGAGAAG
* * ** * * ** *
3151612 AACTTG-TCAAACTATTGCTAGATTCACAACAAATCAAATTAGTAACGCCTCACTTGAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3151676 ACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCAAATAG-GGGGGAAAGAATTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAG-AAGAAGTTCATAA
* *
3151740 TGAG-AGAACTTGTTCGACCTATTGCT-GATTCACAATACTTCGAATCAGCAACG-C-CACTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* ** * ** * * *
3151801 -GGATTGATATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAG
195 GGGATTGACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAG
3151864 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * * * * *
3151878 GACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATCAGCAATGCCTCGCTT-AGGGA-TG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* *
3151941 ACATTTCCAAT-G-GAG-TCCTAATGAG-A-AACTCA-C-GACAGAGGGAGAAAAAGTTTATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * * * * **
3151999 GAGAAGAACTTGTTCAACCTATTACTAGATTCACAATACTTTGAATCAACAACGTATCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * * ** * *
3152064 GGTTTAACATTTCTAATAGAGAGTTTGTAATGAGAA-AACTTATCCGACAGAGAGAGAAGAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
* *
3152128 TATAATGAGAAT
261 CATAATGAGAAG
* * * * * * * *
3152140 AACTTGTTTG-GCTGATTACTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATT
1 AACTTGTTCGACCT-ATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
* * * *
3152204 GACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTC-GATAGAGGGAGAAGAAGTTCCT
65 GACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCA-TCAGACAGAGGGAGAAGAAGTTCAT
* * * ** * * *
3152268 AACGAG-AGTAACATATTCGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCAC
128 AATGAGAAG-AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGCAATGCCTCAC
* * * *
3152331 TTGAGGGATTGGCATTTCCAATTGAGAGTTCGTAATAAGAAG-ACTCAT-C-A-ATGA--GA-AA
191 TTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACA-GAGGGAGAA
* *
3152389 -AA-CTCATCCGACA-GACGGAG
255 GAAGTTCAT---A-ATGA-GAAG
* * **
3152409 AA---GTTTGACCTATT-CTAGA-TCACAACACTTCGAATCAA-ATAAGCCTTGCTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACA-ACGCCTCACTTGAGGGATT
* * * * * *
3152468 GCCATTTCCAATGGAGAGTTTCTAATGATAATAACTCATCCGAAAGAGGGAGAA-ATAGTTCATA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGA-AGTTCATA
* * **
3152532 ATGTGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCACTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* *
3152597 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGAGAAGAAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3152662 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* ** * * * * * * * * *
3152676 AACTTCTTCGAGTTATTGCTAGATTTACAACAATTCTAATTAGCAATGCCTCGCTTTAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3152741 ACATTTCCAATAGAGAGTTCCTAATAAGAAGAACTTATCAGACAGGGGGAGAAGAAGTTAATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * *
3152806 GAGAAGAACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAAATTCA-CAA---CACA-TC
131 GAGAAGAACTTGTTCGACCTATTGC-TAGATTCACAACACTTCG-AA-TCAGCAATGCCTCACTT
*** *** *** * * * * ** *
3152865 GAATCAACAACGCCTCTC-TTGAGAGATGTTCTTAATGAAAAGAACCCATATGACAGAGGAAGAA
193 GAGGGATTGACATTTC-CAATG-GAGA-GTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAA
**
3152929 GAAGTTTTTAATGAGAAG
255 GAAGTTCATAATGAGAAG
* * *** **
3152947 AACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATTTCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3153012 CCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGT-ATCTGACAGAGGGAGAAGTAGTTTCATA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAAC-TCATCAGACAGAGGGAGAAGAAG-TTCATA
* * * * * **
3153076 ATGAGAAGAACTTGTTCGACCTATTGTTAGATTCACAACACCTCAAATTAGTAACACCTCACTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * * *
3153141 AGGGATTGACATTTCCATTGGAGAGTTCCTAATGGGAAAAACCCATCCGACAAATGGAGAAGAAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3153206 TTCATAATGAGAAG
259 TTCATAATGAGAAG
** ** * * *
3153220 AACTTG-TCGACCTATTGCTAGATTCACAACAAATAAAATTAGCAACGCCTCACTTGAGGAATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * * *
3153284 GCATTTCTAATAGAGAGTTCCTAATGCGAAGAACTCATCACATAGGGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * *
3153349 GAGAAGAACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
** * ** * * *
3153414 GGATTGACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATGACAGATGGACAATAAGT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCGACAGAGGGAGAAGAAGT
3153478 TCATAATGAGAA-
260 TCATAATGAGAAG
* * * * *
3153490 AGACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATCAGCAATGCCTCGCTTGAGGGATT
1 A-ACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
* *
3153555 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTTCATAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAA
* * * * * * **
3153620 TGCGAAGAACTTGTTCAACCTATTACTAGATTCACAACACTTTGAATCAACAACGTATCACTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * * * * * *
3153685 GGGTTTAATATTTCTAATAGAGAGTTCGTAATGAGAA-AACTTATCCGACAGAGGGAGAAGAAGT
195 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
*
3153749 TCATAATGAGAAT
260 TCATAATGAGAAG
* * * * * * *
3153762 AACTTGTTCGACCTATTACTAGATTCATAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3153827 ACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTC-GACAGAGGGAGAAGAAGTTCCTA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCA-TCAGACAGAGGGAGAAGAAGTTCATA
* * * ** * ** *
3153891 ATGAGAATAACATGTTTGACCTATTAATCGAATT-ACAACACTTCGAATCAATAACGCCTCACTT
129 ATGAGAAGAACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAGCAATGCCTCACTT
* * * *
3153955 GAGGGATTAACATTTCCAATGTAGAGTTCGTAATTAAGAAGAACTCATCCGACAGAGGGAGAAGA
193 GAGGGATTGACATTTCCAATGGAGAGTTCCTAA-TGAGAAGAACTCATCCGACAGAGGGAGAAGA
*
3154020 AGTTAATAATGAGAAG
257 AGTTCATAATGAGAAG
* * * * **
3154036 AAATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * *
3154101 CCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * **
3154166 GTGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * *
3154231 GGATTGACATCTCCAATGGAGAGTTTCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
3154296 CATAATGAGAAG
261 CATAATGAGAAG
* * ** * * *
3154308 AACTTGTTCAACCTATTGCTAGATTCACAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * ** *
3154373 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCTACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * * **
3154437 GAGAATAACTTGTTTGACCTATTGCTAGATTCATAAAACTTTAAATCAGCAATGCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * *
3154502 GGATTGACATTTTCTAATGGAAAGTTCTTAATGAGAAGAACTCATCCAACAGAGGGAGAAGAAGT
196 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* * *
3154567 TCCTAATGAGGAT
260 TCATAATGAGAAG
** * * * * *
3154580 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAATAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* *
3154645 ACATTTCCAATGGAGAGTTCGC-AATAAGAAGAACTCAT-ATGACAAAGGGAGAAGAAGTTCATA
66 ACATTTCCAATGGAGAGTTC-CTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * * * **
3154708 ATGAGAAGAACTTGTTCAACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * * * * *
3154773 AGGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGAAAAAGGGAGAAGTAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3154838 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * * **
3154852 AACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAA-GACCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACG-CCTCACTTGAGGGATT
* * *
3154916 GA-ATTTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATA
65 GACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATA
* * ** * * * *
3154980 ATGAGAAGAACTTG-TCAAACTATTGCTAGATTCACAACAAATCAAATTAGTAACGCCTCACTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * * *
3155044 AGGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCAGATAGGGGGAGAAGAAT
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3155109 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * * *
3155123 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGTTTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * *
3155188 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCAT-ATGACAGATGGACAATAAGTTCATA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * *
3155251 ATGAGAA-AGACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATCAGCAATGCCTCGCTT
129 ATGAGAAGA-ACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTT
*
3155315 GAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAA
193 GAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAA
*
3155380 GTTTATAATGAGAAG
258 GTTCATAATGAGAAG
* * * * * ** * *
3155395 AACTTGTTCAATCTATTACTAGATTCACAATACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * ** * *
3155460 ACATTTCTAATAGAGAGTTTGTAATGAGAA-AACTTATCCGACAGAGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * * * *
3155524 GAGAATAACTTGTTCG-GCTGATTACTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGA
131 GAGAAGAACTTGTTCGACCT-ATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * * *
3155588 GGGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAG
195 GGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
* *
3155653 TTCCTAACGAG-AG
259 TTCATAATGAGAAG
* * ** *
3155666 TAACATATTCGACCTATTAATCGAATT-AC-A-A---C-AATCAACAACGCCTCACTTGAGGGAT
1 -AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
* * * * * * *
3155724 TGGCATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGCGAGAAGAAGTTAATA
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATA
* * * ** **
3155789 ATGAGAAGAAATTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * *
3155854 AGGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATA
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-A
*
3155918 GTTCATAATGTGAAG
258 GTTCATAATGAGAAG
* * *
3155933 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACCTCAATTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3155998 ACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* ** * * * * * * *
3156063 GAGAAGAACTTCTTCGAGTTATTGTTAGATTTACAACAATTCTAATTAGCAATGCCTCGCTTTAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * * * * *
3156128 GAATTGACATTTCCAATAGAGAGTTTCTAATAAGAAGAACTTATCAGACAGGGGGAGAAGAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
3156193 CATAATGAGAAG
261 CATAATGAGAAG
* * *
3156205 AACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAATCAACAACGCCTCTCTTGAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
** * * * * * *
3156269 GACATTTCCAATTCAGAGTTCTTAATGAAAAGAACCCAT-ATGATAGAGGAAGAAGAAGTTCTTA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * ** **
3156333 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAGCAATTTCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * * *
3156398 AGGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAGAGGGAGAAGTAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3156463 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * * ** * *
3156477 AACTTGTTCGACCTATTGTTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGAATG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3156542 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * ** * * * * *
3156607 GAGAAGAAATTG-TCGACCAATTGCTAGATTCACAACAAATCAAATTAGCAACGCCTCGCATGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * * * * *
3156671 GAATTGACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCTGATAGGGGGAGAACAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
*
3156736 CATTATGAGAAG
261 CATAATGAGAAG
* * *
3156748 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* ** * * * *
3156813 ACATTTCTAATTCAGAGTTCCTAATGTA-AAGAACCCAT-ATGACAGATGGACAATAAGTTCATA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * * * *
3156876 ATGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACAGTTCGAATGAGCAATGCCTCGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* *
3156941 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGAGAGAGGGAGAAAAAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
*
3157006 TTTATAATGAGAAG
259 TTCATAATGAGAAG
* * * * ** * *
3157020 AACTTGTTCAACCTATTACTAGATTCACAATACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * ** * *
3157085 ACATTTCTAATAGAGAGTTTGTAATGAGAA-AACTTATCCGACAGAGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * * * *
3157149 GAGAATAACTTGTTCG-GCTGATTACTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGA
131 GAGAAGAACTTGTTCGACCT-ATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * ** * *
3157213 GGGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTAGATAGAGGGGGAAGAAG
195 GGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
* *
3157278 TTCCTAACGAG-AG
259 TTCATAATGAGAAG
* * ** *
3157291 TAACATATTCGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
1 -AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
* * * * * * *
3157355 TGGCATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGCGAGAAGAAGTTAATA
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATA
* * * ** **
3157420 ATGAGAAGAAATTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * *
3157485 AGGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATA
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-A
*
3157549 GTTCATAATGTGAAG
258 GTTCATAATGAGAAG
* * *
3157564 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACCTCAATTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3157629 ACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGA-GGAGAAGATGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* ** * * * * *
3157693 GAGAAGAACTTCTTCGAGTTATTG-TAGATT-ACAACAATTCTAATTAGCAATGCCTCGCTTTAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * * *
3157756 GAATTGACATTTCCAATAGAGAGTTCCTAATAAGAAGAACTTAT-CGACAGGGGGAGAAGAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
3157820 CATAATGAGAAG
261 CATAATGAGAAG
* *
3157832 AACTTGTTCGACC-ATTGCTTA-ATTCAC-ACA--TCGAATCAACAACGCCTCTCTTGAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
** * * * * *
3157892 GACATTTCCAATTCAGAGTT-CTAATGAAAAGAACCCAT-ATGATAGAGGAAGAAGAAGTTCTTA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * *
3157955 AT--G-AGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAGCAAT---T-GCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * *
3158013 AGGGATTGCCATTTTCAATGGAGAGTTTCTAATGAG-AGAA--CAT-C-TCAGAGGGAGAAGTAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3158073 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * *
3158087 AACTTGTTCGACCTATTGTTAGATTCACAACACTTCAAAT-TAC-A--CCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3158148 ACATTTCCAATTGGAGAGTT-CTAATGAGAAAAACTCATCCGA-AGATGGAGAAGAAGTTCATAA
66 ACATTTCCAA-TGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAA
* * ** * **
3158211 TGAGAAGAAATTG-TCGACCAATTGCTAGATTCACAACAAATCAAATTGGCAATGCCTGCA--TG
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCT-CACTTG
* * * *
3158273 A-GGATTGACATTTCCTAATAGAGAGTTCCTAATGAGAA-AACTCATCTGATAGGGGGAGAAGAA
194 AGGGATTGACATTTCC-AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAA
*
3158336 GTTCATTATGAGAAG
258 GTTCATAATGAGAAG
* * *
3158351 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* ** * * * * *
3158416 ACATTTCTAATTCAGAGTTCCTAATGTA-AAGAACCCAT-ATGACAGATGGACAATATGTTCATA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
** * * * *
3158479 ATGAGAAGGCCTTTTTTGACCTATTTCTAGATTCACAACACTTCGAATCAGCAATGCCTCGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * *
3158544 AGGGATTGATATTTCTAATGGAGAGTTCCGAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
*
3158609 TTTATAATGAGAAG
259 TTCATAATGAGAAG
* * * * ** * *
3158623 AACTTGTTCAACCTATTACTAGATTCACAATACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * * * * *
3158688 ACATTTCTAATAGAGAGTT-TTAATTA-AAAAACTTATCCGAAAGAGGGAGAAGAAGTTCATAAC
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * * * * * *
3158751 GAGAATAAGTTGTTCGGCCGATTACTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * *
3158816 GGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAGT
196 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* *
3158881 TCCTAACGAG-AG
260 TCATAATGAGAAG
* * ** *
3158893 TAACATATTCGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
1 -AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
* * * * * * *
3158957 TGGCATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATCCGACAGAGCGAGAAGAAGTTAATA
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATA
* * * ** **
3159022 ATGAGAAGAAATTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * *
3159087 AGGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATA
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-A
*
3159151 GTTCATAATGTGAAG
258 GTTCATAATGAGAAG
* * *
3159166 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACCTCAATTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3159231 ACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGACGGAGAAGATGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* ** * * * * * * *
3159296 GAGAAGAACTTCTTCGAGTTATTGTTAGATTTACAACAATTCTAATTAGCAATGCCTCGCTTTAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * * * * *
3159361 GAATTGACATTTCCAATAGAGAGTTCCTAATAAGAAGAACTTATCAGAAAGGGGGAGAAGAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
3159426 CATAATGAGAAG
261 CATAATGAGAAG
* * * *
3159438 AACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAATCAACAACGCATCTCTTGAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
* ** * * * * *
3159502 GACAATTCCAATTCAGAGTTCTTAATGAAAAGAACCCAT-ATGACAGAGGAAGAAGAAGTTCTTA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * * * ** **
3159566 ATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAATACTTCGAATGAACAATTTCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * * *
3159631 AGGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACACATCTGACAGAGGGAGAAGTAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3159696 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * * ** ** *
3159710 AACTTGTTCGACCTATTGTTAGATTCACAACACTTCAAATTAGTAATACATCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3159775 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * ** * * * *
3159840 GAGAAGAAATTG-TCGACCAATTGCTAGATTCACAACAAATCAAATTAGCAACGCCTCACATGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * * *
3159904 GAATTGACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCAGATAGAGGGAGAAGAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
*
3159969 CATTATGAGAAG
261 CATAATGAGAAG
* * * * *
3159981 AACTTGTCCGACCTATTACTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* ** * * * *
3160046 ACATTTCTAATTCAGAGTTCCTAATGTA-AAGAACCCAT-ATGACAGATGGACAATAAGTTCATA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * * *
3160109 ATGAGAATG-ACTTGTTTGACCTATTTCTAGATTCACAACAATTCGAATCAGTAATGCCTCACTT
129 ATGAGAA-GAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTT
* * *
3160173 GAGGGATTGATATTTCCAATGGAGAGTTACTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAA
193 GAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAA
3160238 GTTCATAATGAGAAG
258 GTTCATAATGAGAAG
* * * * ** * * *
3160253 AACTTGTTCAACCTATTGCGAGATTCATAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3160318 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * * * * *
3160382 GA-AATAACTTGTTCGACCTATTTCTAGGTTCATAAAACTTTGAATCAGCAACGCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * * *
3160446 GGATTGACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCGATAGAGGGAAAAGAAGT
196 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* *
3160511 TCCTAATGAGAAT
260 TCATAATGAGAAG
** * * *
3160524 AACTTGTTCGACCTATTAATTGATTCACAACACTTCGAATCAACAATGCCTCACTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3160589 ACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCAT-ATGATAGAGGGAGAAGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATAA
* * * * ***
3160653 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCAAATGAACAATGCCTTGGTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
** * * * * * * * *
3160718 GGGATTTCCATTTTCAATGGAGAGTTTCTAATTAGAAGAACGCATCTGACAGAGGAAGAAGTAGC
195 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
3160783 TCATAATGAGAAG
260 TCATAATGAGAAG
* * * ** * *
3160796 AACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAACACCTCACTTAAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3160861 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* ** * * * *
3160926 GAGAAGAACTTG-TGGACCTATTGCTAGATTCACAACAAATCAAATTAGCAAAGCCTCGCTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * * * *
3160990 GAATTGACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCAGATAGGGGGAGAAGAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
* *
3161055 CATTATGAGAAT
261 CATAATGAGAAG
* * * *
3161067 AACTTGTTCGACCTATTACTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * * * *
3161132 ACATTTCCAATTCAGAGTTCCTAATGTA-AAAAACCCAT-ATGACAGATGGACAATATGTTCATA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * *
3161195 ATGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * *
3161260 AGGGATTGATATTTCCAATGGAGAGTACCGAATGAGAAGAACTCATCCGACAGAGGGAGAAAAAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
*
3161325 TTTATAATGAGAAG
259 TTCATAATGAGAAG
* * * * ** * *
3161339 AACTTGTTCAACCTATTACTAGATTCACAATACTTTGAATCAACAACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * * * *
3161404 ACATTTCTAATAGAGAGTT-TTAATTA-AAAAACTTATCCGAAAGAGGGAGAAGAAGTTCATAAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCAT-AA
* * * * *
3161467 CGAG-ATAA-TTGTTCG-CCTA---CTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * * *
3161526 GGGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGATAGAGGGAGAAGAAG
195 GGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
* *
3161591 TTCCTAACGAG-AG
259 TTCATAATGAGAAG
* * *
3161604 TAAC--ATTCGACCTAAT-CGA-ATT-AC-A-ACTTCGAAT---C-ACGCCTCACTTGAGGGATT
1 -AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
* * *
3161658 GGCATTTCCAAT-G-GA-TTCGTAATAAGAAGAACTCAT-ATGACAGAGGGAGAAGAAGTTCATA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * * * **
3161719 AAGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * * *
3161784 AGGGATTGTCATTTTCAATGGAGAGTTTCTAATTAGAAGAACGCATCTGACAG-GGGAGAAGAAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3161848 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * ** *
3161862 AACTTGTTCGACCTATTGCTAGATT--CAACACTTCAAATTAGTAACACCTCACTT--GGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* ** * * * * *
3161923 ATATTTCCGTTGGAGAGTTCCTAATGAGAAAAACTCATCTGATAGATGGAGTAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* ** * * *
3161988 GAGAAGAACTTG-TCGACCTATAGCTAGATTCACAACAAATCAAATTAGCAACGCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* ** * * * * * *
3162052 GAATTGGTATTTCTAATAGAGAGTTCATAATGAGAAGAACTCATCAGATAGGGGGAGAAGAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
3162117 CATAATGAGAAG
261 CATAATGAGAAG
* * *
3162129 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCGAATCAGCAACGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * * *
3162194 ACATTTCCAATTCAGAGTTCCTAAT--TAAGAAACCCAT--GACAGATGGAAAATAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAG-AACTCATCAGACAGAGGGAGAAGAAGTTCATAA
* * * *
3162255 TGAGAAGGAC-TGTTTGA-CTATTGCTAGATTCACAACACTTCGAATCAGTAATGCCTCGCTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
3162318 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAAC-CATCCGACA-A---AG-AGAAGT
195 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
3162377 TCATAATGAGAAG
260 TCATAATGAGAAG
* * * ** * *
3162390 AACTTGTTCAACCTATTACTAGATTCACAACACTTTGAATCAA-AACGTATCACTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3162454 ACATTTCTAATAGAGAGTTCGTAATGAGAA-AACTTATCCGACAGAGGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * * *
3162518 GAGAATAACTTGTTCGACCTATTACTAGATTCACAAAACTTTGAATTAGCAATGCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * *
3162583 GGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCGACATAGGGAGAAGAAGT
196 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* *
3162648 TCCTAATGAGAAT
260 TCATAATGAGAAG
* * ** *
3162661 AACATGTTTGACCTATTAATCGAATT-ACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
* * * *
3162725 GACATTTCCAATGGAGAGTTCGTAATAAGAAGAAATCATCCGACAGAGGGAGAAGAAG-T--TAA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAA
* * ** **
3162787 TGAGAAGAAAATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTG
130 TGAGAAG-AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * *
3162852 AGGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGAAAGAGGGAGAA-ATA
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA-A
*
3162916 GTTCATAATGTGAAG
258 GTTCATAATGAGAAG
* * *
3162931 AACTAGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCAATTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * ** *
3162996 AGATCTCCAATGGAGAGTTCCTAATGAGAA-AATCTCATCCTACAGACGGAGAAGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAA-CTCATCAGACAGAGGGAGAAGAAGTTCATAA
* * * * * * * * * *
3163060 TGAGATGAACATCTTCGACCTATTGCTAGATTTACAACAATTCTAATTAGCAATACCTCGCTTTA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * * * * *
3163125 GGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTTATCAGACAGGGGGAGAAAAAGT
195 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
3163190 TCATAATGAGAAG
260 TCATAATGAGAAG
* * * ** *
3163203 AACTTGTTCGACCTATTTCTTA-ATTCATAACACATCGAATCAACAACGCCTCTGTTGAGAGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
* ** * * * * * *
3163267 GACATTTCTAATTCAGAGTTCTTAATGAAAAGAACCCAT-ATGATAGAGGAAGAAGAAGTTCTTA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * ** ** **
3163331 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAATAATTTCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * * *
3163396 AGGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAGAGGGAGAAGTAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3163461 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * * ** *
3163475 AACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * * *
3163540 ACATTTCTATTGGAGAGTTCCGAATGAGAAAAACTCATCCGACAGATGGAGAAGAAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * ** * * * *
3163605 GAGATGAAATTG-TCGACCTATAT-CTAGATTCACAACAAAT-AATATTAGTAATGCCT-AGCAT
131 GAGAAGAACTTGTTCGACCTAT-TGCTAGATTCACAACACTTCGA-ATCAGCAATGCCTCA-CTT
* * * * * * * *
3163666 GAGGAATTGAAATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCAGATAGGGGGAGAATAA
193 GAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAA
3163731 GTTCATAATGAGAAG
258 GTTCATAATGAGAAG
* * * * *
3163746 AACTTGTTCGACCTATTGCTTGATTCACAATACTTCAAATCAGCAACGCCTCACTTGAGGGACTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3163811 ACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCA-ACAGAGAGAGAAGAAGTTCCTA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CAGACAGAGGGAGAAGAAGTTCATA
* * ** * * *
3163875 ATGAGAATAACTTATTCGACCTATTAATCGATTCACAA-ACTTCGAATCAACAATG-CTCGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * **
3163938 AGGGATTAACATTT-CAAT-GAGAG-TCGTAA--AGAA-AACTCATATGACAGA-GG-GAAGAAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3163995 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * * * * * * * * * *
3164009 AACTTGTTTGACCTAGACATTTCTA-A-T-A-GAGAGTTCCTAATGAGA-AACTCATCA-TAGGG
1 AACTTGTTCGACCT----ATTGCTAGATTCACAACACTT-CGAATCA-ACAACGCCTCACTTGAG
* * * * *
3164068 GGA--GA-ATAAGTTCATAATGAAGAAACTTGTTTGACCTATTGCTTGATTCACAACTTCGAATC
60 GGATTGACAT---TTC-CAATG--GAGA---G-TT--CCTAATG--AGA---AGAAC-TC--ATC
* *
3164130 AGCAACGCCTCACTTGAGGGATTGACCTTTCAATGGAGAGTTC-TAATGAGAAGAACATCCG-AC
105 AG--A-----CA---GAGGGA--G-------AA--GA-AGTTCATAATGAGAAGAAC-T-TGTTC
*** ** * *
3164193 AGAGGAGAAGAAGTT-CATAGAGAAGAACTTGTTCAAC-CTATTGCTAGATTCA-CAACACTTTG
146 ------GACCTA-TTGC-T-----AG-A-TT-CACAACAC--TT-C--GAATCAGC-A-A-TG--
* * *
3164255 AATCAACAACGAATCGCTTGAGGGTTTAACATTT-CAAT--AGAGTTCCTAAT--GAA-AACTCA
185 ------C--C---TCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCA
3164314 TCCGACAGA-GGAGAAGAAGTTCATAATGAGAA-
239 TCCGACAGAGGGAGAAGAAGTTCATAATGAGAAG
* * * *
3164346 AACTTGTTCGACCTA-T--TAGATTCACAAAACTTTGAATCAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* *
3164408 ACATTTTCTAATGGAGAGTT-CTAATGAGAAGAA-TCATC-GACAGAGGGAGAAG-AGTTCCTAA
66 ACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAA
* * * *
3164469 TGAGAATAACTTGTTCGACCTATTGCTCGATTTACAACACTTCGAA--A-TAA--CCTCACTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * *
3164529 GGGATT-AAATTTCC-ATGGAGAGTTCGTAATAAGAAGAACTCAT--G--AGA-GGAGAAGAAGT
195 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
3164587 T-ATAATGAGAAG
260 TCATAATGAGAAG
* **
3164599 AAC-TGTT-GACCTATTGCTAGATTCACAACACTTCGAAT---GAACGCCTTGC-TGA-GGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3164657 ACATTT-CAATGGAGAGTT-CTAAT--GAAGAA--CATCTGACAGA-GAAGAAGTAG-T-A-AAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
*
3164712 GAGAAGAACTTGTTCGACCTATTGCT-GATTCACAACACTTCG-AT-A--AA-CCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* *
3164771 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAA-AACTCATCCGACAGATGGAGAAGACGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
3164835 CAT-ATGAGAAG
261 CATAATGAGAAG
* ** *
3164846 AACTTG-TCGACCTA-TGCTAGATTCAC-ACA--TCTAAT-TTCAACGCCTCGC-TGAGGG-TTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3164903 ACTTTTCTAATAGAGAGTTCCTAATGAGAAAAACTCATCAGATAG-GGGAGAAGAAGTT--TAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * *
3164965 GAGAAGAACTTGTTCGACCTA-T-CTAGATTCACAATACTTCAAATCAGCAACG-CTCACCTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
** *
3165027 GGATTGA-ATTTCCAATTCAGAGTTTCCTAATG-GAAAGAACT-AT--GACAGA-GGAGAAAAAG
196 GGATTGACATTTCCAATGGAGAG-TTCCTAATGAG-AAGAACTCATCCGACAGAGGGAGAAGAAG
3165086 TTCATAAT--G-AG
259 TTCATAATGAGAAG
* * * * * *
3165097 AATTTGTTTGA-CTATTGCTAGATTCAAAAAACACTTCGAATCAGCAATGCCTCGCTTGAGGGAT
1 AACTTGTTCGACCTATTGCTAGATTC--ACAACACTTCGAATCAACAACGCCTCACTTGAGGGAT
*
3165161 TG--ATTT-C--T--AGAGTTCCTAAT--GAAGAACTCATCCG--AGA-GG-G-AG-AGTTCATA
64 TGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATA
*
3165211 ATGAGAAGAACTTGTTCGACCTATT-CTA-ATTCACAACACTT-GAATCA--AA--CGTC-CTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* ** * **
3165268 AGGTTTCTAATTAGAAGAACGCATCTGACAGA-GGAAGAAGTAGCTCATAATGAGAAGAACTTGT
194 AGG-----GATT----G-A--CAT-TTCCA-ATGG-AG-AGT---TCCTAATGAGAAGAACTCAT
* ** ** ** * * ****
3165332 TCGACCTATTG-CTAG-A-TTCACAA-CACTTC
240 CCGACAGAGGGAGAAGAAGTTCATAATGAGAAG
* * *** * * * * ** * * * * **
3165361 AAATTAGTAAC-ACCTCACTTGAGGGATT---GACATTTCCATTGGAGAGCTCCT-A-ATGAGAA
1 AACTT-GT-TCGACCT-A-TTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGG
**** * * *
3165420 AAACTCA-TCCGACAGATGGAGAAGAAGTTCATAATGAGAAGAACTTGTCGACCTATTG-CTAGA
62 ATTGACATTTC--CA-AT-G-G-AG-AGTTCCTAATGAGAAGAAC---TC-ATC-A--GAC-AGA
*** * * * * * * *** * * * *
3165483 TTCACAACAA-ATC-TAATTAGCAA-AGCCTCGCTT-GAGGAATTGACT--TTTCTAATAGAGAG
112 GGGAGAAGAAGTTCATAATGAG-AAGA-ACTTG-TTCGACCTATTG-CTAGATTC--ACA-ACAC
* * *** * ** **** *
3165542 TTCCTAATGAG-AAAAACTCA--TCA--GA-T-AGGTGGAGAA--GA-AGTTCATAATGAGAAGA
170 TT-CGAATCAGCAATGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGA
** * * ** * * * *
3165597 ACTTGTTCGACCTATTACTTGATTCACA-ATACTTCA-AATCAG--C
234 ACTCATCCGA-C-A-GA-GGGA--GA-AGA-AGTTCATAATGAGAAG
* ** * * * * *
3165640 AAC--GCCTC-ACCTGAGGGATTGAGATTTC-CAATTCAGAGTTCCTAATGTAA-AGA-ACC-CA
1 AACTTG-TTCGACCT-ATTG-CT-AGA-TTCACAA--C--ACTT-CGAAT-CAACA-ACGCCTCA
** * * * * ** ** ** ** **
3165698 -TATGACAGATGGACA-----AA---A-AGTTCATAATGAGAAGGATTTGTTTGACCTATTG-CT
54 CT-TGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGA
* ** * * * * *** ** * *
3165752 AG-A-TTCACAACACTTCGAATCAGCAATGCCTCG--C--TTGAGGGATT---GGCATTTCCAAT
118 AGAAGTTCA-TA-A-TGAGAA-GAAC-TTG-TTCGACCTATTGCTAGATTCACAACACTTCGAAT
* * * * * * * *
3165808 AAAG-AGTTCCT-A-ATGAGAAGAATT--CA-TCCGACAGAGGGAGAAAAAGTTCATAATGAGAA
177 -CAGCAATGCCTCACTTGAG--GGATTGACATTTC--CA-ATGGAG----AGTTCCTAATGAGAA
** * * ** ** ** * * *
3165867 GAACTTGTTCAACCTA-TTACTAG-A-TTCACAACACTTTGAATCAAT
232 GAACTCATCCGACAGAGGGAGAAGAAGTTCA-TA-A---TG-A-GAAG
* * * * * *** * * **
3165912 AAC--GTATC-A-C--TTG--AGGGTT--TAACATTTCTAAT-AGAGAGTTCGT-A-ATGAGAAA
1 AACTTGT-TCGACCTATTGCTA-GATTCACAACACTTCGAATCA-ACAACGCCTCACTTGAG-GG
* ** * * * * * *
3165964 ATTTATCA--GACAGAGGGAGAAGAAGTTCATAATGAGAATAACTTGTTCGACCTATTACTAGAT
62 ATTGA-CATTTCCA-A-TG-G-AG-AGTTCCTAATGAGAAGAAC----TC-ATC-A-GAC-AGAG
** * * * * ** *** * *
3166027 TCACAA-AACTT--TGAATTAGCAATG-CCTCACTT-GAGGGATTGAC-A-TTTCCCTCAACACT
113 GGAGAAGAAGTTCAT-AATGAG-AA-GAACT-TGTTCGACCTATTG-CTAGATT--CACAACACT
* * * * *
3166085 TCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAGTGGAGAGTTCGTAATAAGAAGAAC
171 TCGAATCAGCAATGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAAC
* *
3166150 TCATCCGACAGACGGAG-AGAAGTTAATAATGAGAAG
236 TCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAG
* * * * ** *
3166186 AAATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCAATAATGCCTTGCTTGAGTGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * ** * * * *
3166251 CCATTTCTAATGGAGAGTTTATAATGAGAATAACTCATCCGAAAGAGGGAGAAGTAGTTCATAAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * **
3166316 GTGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACACCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * *
3166381 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCTGAAAGATGGAGAAGAAGTT
196 GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
3166446 CATAATGAGAAG
261 CATAATGAGAAG
* * *
3166458 AACTTG-TCGACCTATTGCTTA-ATTCATAACACATCGAATCAACAACGCCTCTCTTGAGGGATT
1 AACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATT
* ** * * * * *
3166521 GACATTTCTAATTCAGAGTTCTTAATGAAAAGAACCCAT-ATGACAGAGGGAGAAGAATTTCTTA
65 GACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * * * * * **
3166585 ATGATAAGAACTTGTTCGACCTATTGCTAGATTCATAATACTTCGAATGAACAATGCATTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * * * * *
3166650 AGGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGACAGTGAGAGAAGTAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
3166715 TTCATAATGAGAAG
259 TTCATAATGAGAAG
* * * ** * * *
3166729 AACTTGTTCAACCTATTGCTAGATTCATAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3166794 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * * * * **
3166858 GAGAATAACTTGTTCGACCTATTGCTAGATTAATAAAACTTTGATTCAGCACCGCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * * *
3166923 GGATTGACATTTTCTAATAGAGAGTTCTTAATGAGAAGAATTCATCCGACAGAGAGAGAAGAAGT
196 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* *
3166988 TCCTAATGAGAAT
260 TCATAATGAGAAG
** * * * *
3167001 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAACAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* *
3167066 ACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCAT-ATGACAGAGGGAGAAGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATAA
* * * **
3167130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * * * * * *
3167195 GGGATTGCCATTTTCAATGGAGAGTTTCTAACT-AGAAGAACGCATCTGACAGAGGAAGAAGTAG
195 GGGATTGACATTTCCAATGGAGAGTTCCTAA-TGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
*
3167259 CTCATAATGAGAAG
259 TTCATAATGAGAAG
* * ** *
3167273 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * *
3167338 ACATTTCCATTGGAGAGTTCCTAATGAGAAAAACTCATCCA-ACAGATGGAGAAGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CAGACAGAGGGAGAAGAAGTTCATAA
** * ** * *
3167402 TGAGAAGAACTTG-TCGACCTATTGCTAGATTCACAACAAATCAAATTTGCAAAGCCTCGCTTGA
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGA
* * * * * * *
3167466 GGAATTGACATTTCTAATAGAAAGTTCCTAATGAGAAGAACTCATCGGATAGGGGGAGAAGAAGT
195 GGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
*
3167531 TCATTATGAGAAG
260 TCATAATGAGAAG
* * * * *
3167544 AACTTGTTCGACCTATTACTTGATTCACAATACTTCGAATCAGCAATGCCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
** * * * * *
3167609 ACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCAT-ATGACAGATGGACAATAAGTTCAAA
66 ACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCATA
* * * *
3167672 ATGAGAATG-ACTTGTTTGACCTATTTCTAGATTCACAATAATTCGAATCAGCAATGCCTCACTT
129 ATGAGAA-GAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTT
* *
3167736 GAGGGATTGACATTTCGAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAAA
193 GAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAA
3167801 GTTCATAATGAGAAG
258 GTTCATAATGAGAAG
* * * ** * * *
3167816 AACTTGTTCAACCTATTGCTAGATTCATAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3167881 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * * * *
3167945 GAGAATAACTTGTTCGACCTATTTCTAGATTCATAAAACTTTGAATCAGCAACGCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* * * *
3168010 GGATTGACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCATCCGACAGAGAGAGAAGAAGT
196 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGT
* *
3168075 TCCTAATGAGAAT
260 TCATAATGAGAAG
** * * * *
3168088 AACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCAACAATGCCTCGCTTGAGGGATTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* *
3168153 ACATTTCCAATGGAGAGTTCATAATAAGAAGAACTCAT-ATGACAGAGGGAGAAGACA-TTCATA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCA-GACAGAGGGAGAAGA-AGTTCATA
* * * **
3168216 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGAACAATGCCTTGCTTG
129 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTG
* * * * * * * * *
3168281 AGGGATTGCCATTTTCAATAGAGAGTTTCTAATTAGAAGAACGCATCTGACAGAGGAAGAAGTAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
*
3168346 CTCATAATGAGAAG
259 TTCATAATGAGAAG
* * ** *
3168360 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCAAATTAGTAACACCTCACTTGAGGGATTG
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * *
3168425 ACATTTCCATTAGAGAGTTCCTAATGAGAAAAACTCATCCA-ACAGATGGAGAAGAAGTTCATAA
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CAGACAGAGGGAGAAGAAGTTCATAA
** * * *
3168489 TGAGAAGAACTTG-TCGACCTATTGCTAGATTCACAACAAATC-AATTTAGCAAAGCCTCGCTTG
130 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAA-TCAGCAATGCCTCACTTG
* * * * * *
3168552 AGGAATTGACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATCGGATAGGGGGAGAAGAAG
194 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAG
*
3168617 TTCATTATGAGAAG
259 TTCATAATGAGAAG
* * * *
3168631 AACTTGTTCGACCTATTACTTGATTCACAATACTTCGAATCAGCAATC-CCTCACTTGAGGGATT
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAA-CGCCTCACTTGAGGGATT
** * * * * *
3168695 GACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCAT-ATGACAGATGGACAATAAGTTCAA
65 GACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCA-GACAGAGGGAGAAGAAGTTCAT
* * *
3168758 AATGAGAATG-ACTTGTTTGACCTATTTCTAGATTCACAACAATTCGAATCAGCAATGCCTCACT
128 AATGAGAA-GAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACT
* *
3168822 TGAGGGATTGACATTTCGAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAAA
192 TGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGA
3168887 AGTTCATAATGAGAAG
257 AGTTCATAATGAGAAG
* * * ** * * *
3168903 AACTTGTTCAACCTATTGCTAGATTCATAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTA
1 AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
* * * * *
3168968 ATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGAT
66 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
* * * * * * *
3169032 GAGAATAACTTGTTTGACCTATTTCTAGATTCAAAAAACTTTGAATCAGCAACGCCTCACTTGAG
131 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
* *
3169097 GGATTGACATTTTCTAATGGAGAGTTCTTAATGAGAAGAA
196 GGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAA
3169137 GTTCCTAATG
Statistics
Matches: 19234, Mismatches: 3488, Indels: 1561
0.79 0.14 0.06
Matches are distributed among these distances:
240 3 0.00
241 32 0.00
242 42 0.00
243 25 0.00
244 19 0.00
245 16 0.00
246 30 0.00
247 70 0.00
248 59 0.00
249 17 0.00
250 8 0.00
251 37 0.00
252 70 0.00
253 96 0.00
254 73 0.00
255 137 0.01
256 80 0.00
257 84 0.00
258 100 0.01
259 161 0.01
260 107 0.01
261 105 0.01
262 173 0.01
263 281 0.01
264 279 0.01
265 141 0.01
266 392 0.02
267 361 0.02
268 162 0.01
269 185 0.01
270 769 0.04
271 4897 0.25
272 8204 0.43
273 1335 0.07
274 130 0.01
275 22 0.00
276 26 0.00
277 15 0.00
278 17 0.00
279 67 0.00
280 20 0.00
281 14 0.00
282 21 0.00
283 26 0.00
284 11 0.00
285 19 0.00
286 16 0.00
287 7 0.00
288 14 0.00
289 12 0.00
290 2 0.00
291 4 0.00
292 11 0.00
293 12 0.00
294 5 0.00
295 2 0.00
296 4 0.00
297 2 0.00
298 2 0.00
300 14 0.00
301 7 0.00
303 1 0.00
305 6 0.00
307 3 0.00
308 5 0.00
313 2 0.00
314 1 0.00
315 3 0.00
316 7 0.00
318 4 0.00
319 1 0.00
320 4 0.00
321 6 0.00
322 1 0.00
323 3 0.00
325 5 0.00
328 2 0.00
329 1 0.00
330 2 0.00
331 1 0.00
332 5 0.00
333 12 0.00
334 16 0.00
335 3 0.00
336 6 0.00
337 61 0.00
338 21 0.00
ACGTcount: A:0.36, C:0.17, G:0.20, T:0.27
Consensus pattern (272 bp):
AACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAACAACGCCTCACTTGAGGGATTG
ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCAGACAGAGGGAGAAGAAGTTCATAAT
GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAATGCCTCACTTGAG
GGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTT
CATAATGAGAAG
Found at i:3152855 original size:17 final size:17
Alignment explanation
Indices: 3152833--3152867 Score: 70
Period size: 17 Copynumber: 2.1 Consensus size: 17
3152823 CCTATTGCTT
3152833 AATTCACAACACATCGA
1 AATTCACAACACATCGA
3152850 AATTCACAACACATCGA
1 AATTCACAACACATCGA
3152867 A
1 A
3152868 TCAACAACGC
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 18 1.00
ACGTcount: A:0.49, C:0.29, G:0.06, T:0.17
Consensus pattern (17 bp):
AATTCACAACACATCGA
Found at i:3165719 original size:136 final size:135
Alignment explanation
Indices: 3165294--3166075 Score: 888
Period size: 136 Copynumber: 5.8 Consensus size: 135
3165284 GAACGCATCT
* * *
3165294 GACAGA-GGAAGAAGTAGCTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACAC
1 GACAGATGG-AGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTAGATTCACAACAC
* * * * * * *
3165358 TTCAAATTAGTAACACCTCACTTGAGGGATTGACATTTCCATTGGAGAGCTCCTAATGAGAAAAA
65 TTCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGAAAAA
*
3165423 CTCATCC
130 CTCAT-A
* **
3165430 GACAGATGGAGAAGAAGTTCATAATGAGAAGAACTTG-TCGACCTATTGCTAGATTCACAACAAA
1 GACAGATGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTAGATTCACAACACT
* * * * * * *
3165494 TCTAATTAGCAAAGCCTCGCTTGAGGAATTGACTTTTCTAATAGAGAGTTCCTAATGAGAAAAAC
66 TCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGAAAAAC
3165559 TCATCA
131 TCAT-A
* * * *
3165565 GATAGGTGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTTGATTCACAATACT
1 GACAGATGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTAGATTCACAACACT
* * * ** *
3165630 TCAAATCAGCAACGCCTCACCTGAGGGATTGAGATTTCCAATTCAGAGTTCCTAATGTA-AAGAA
66 TCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATG-AGAAAAA
*
3165694 CCCATA
130 CTCATA
* * * * * *
3165700 TGACAGATGGACAAAAAGTTCATAATGAGAAGGATTTGTTTGACCTATTGCTAGATTCACAACAC
1 -GACAGATGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTAGATTCACAACAC
* * * * *
3165765 TTCGAATCAGCAATGCCTCGCTTGAGGGATTGGCATTTCCAATAAAGAGTTCCTAATGAGAAGAA
65 TTCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGAAAAA
* *
3165830 TTCATCC
130 CTCAT-A
* * *
3165837 GACAGAGGGAGAAAAAGTTCATAATGAGAAGAACTTGTTCAACCTATTACTAGATTCACAACACT
1 GACAGATGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTAGATTCACAACACT
* ** ** * * * * *
3165902 TTGAATCAATAACGTATCACTTGAGGGTTTAACATTTCTAATAGAGAGTTCGTAATGAG-AAAAT
66 TCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGAAAAAC
*
3165966 TTATCA
131 TCAT-A
* * *
3165972 GACAGAGGGAGAAGAAGTTCATAATGAGAATAACTTGTTCGACCTATTACTAGATTCACAAAACT
1 GACAGATGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTAGATTCACAACACT
* * *
3166037 TTGAATTAGCAATGCCTCACTTGAGGGATTGACATTTCC
66 TCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCC
3166076 CTCAACACTT
Statistics
Matches: 547, Mismatches: 93, Indels: 13
0.84 0.14 0.02
Matches are distributed among these distances:
135 220 0.40
136 324 0.59
137 3 0.01
ACGTcount: A:0.36, C:0.18, G:0.19, T:0.27
Consensus pattern (135 bp):
GACAGATGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTAGATTCACAACACT
TCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGAAAAAC
TCATA
Found at i:3166210 original size:183 final size:183
Alignment explanation
Indices: 3165895--3166257 Score: 458
Period size: 183 Copynumber: 2.0 Consensus size: 183
3165885 ACTAGATTCA
* * * * * *
3165895 CAACACTTTGAATCAATAACGTATCACTTGAGGGTTTAACATTTCTAATAGAGAGTTCGTAATGA
1 CAACACTTCGAATCAACAACGCATCACTTGAGGGATTAACATTTCCAATAGAGAGTTCGTAATAA
* * * * * *
3165960 GAAAATTTATCAGACAGAGGGAGAAGAAGTTCATAATGAGAATAACTTGTTCGACCTATTACTAG
66 GAAAACTCATCAGACAGACGGAGAAGAAGTTAATAATGAGAAGAAATTGTTCGACCTATTACTAG
* * *
3166025 ATTCACAAAACTTTGAATTAGCAATGCCTCACTTGAGGGATTGACATTTCCCT
131 ATTCACAAAACTTCGAATCAACAATGCCTCACTTGAGGGATTGACATTTCCCT
* * * *
3166078 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAGTGGAGAGTTCGTAATAA
1 CAACACTTCGAATCAACAACGCATCACTTGAGGGATTAACATTTCCAATAGAGAGTTCGTAATAA
* * *
3166143 GAAGAACTCATCCGACAGACGGAG-AGAAGTTAATAATGAGAAGAAATTGTTTGACCTATTGCTA
66 GAA-AACTCATCAGACAGACGGAGAAGAAGTTAATAATGAGAAGAAATTGTTCGACCTATTACTA
* * ** * *
3166207 GATTCACAACACTTCGAATCAATAATGCCTTGCTTGAGTGATTGCCATTTC
130 GATTCACAAAACTTCGAATCAACAATGCCTCACTTGAGGGATTGACATTTC
3166258 TAATGGAGAG
Statistics
Matches: 151, Mismatches: 28, Indels: 2
0.83 0.15 0.01
Matches are distributed among these distances:
183 135 0.89
184 16 0.11
ACGTcount: A:0.34, C:0.18, G:0.19, T:0.28
Consensus pattern (183 bp):
CAACACTTCGAATCAACAACGCATCACTTGAGGGATTAACATTTCCAATAGAGAGTTCGTAATAA
GAAAACTCATCAGACAGACGGAGAAGAAGTTAATAATGAGAAGAAATTGTTCGACCTATTACTAG
ATTCACAAAACTTCGAATCAACAATGCCTCACTTGAGGGATTGACATTTCCCT
Found at i:3166422 original size:136 final size:136
Alignment explanation
Indices: 3166078--3169136 Score: 3522
Period size: 136 Copynumber: 22.5 Consensus size: 136
3166068 ACATTTCCCT
* * *
3166078 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAGTGGAGAGTTCGTAATAA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* * * *
3166143 GAAGAACTCATCCGACAGACGGAG-AGAAGTTAATAATGAGAAGAAATTGTTTGACCTATTGCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3166207 GATTCA
131 GATTCA
* * ** * * * **
3166213 CAACACTTCGAATCAATAATGCCTTGCTTGAGTGATTGCCATTTCTAATGGAGAGTTTATAATGA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* * * *
3166278 GAATAACTCATCCGAAAGAGGGAGAAGTAGTTCATAATGTGAAGAACTTGTTCGACCTATTGCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3166343 GATTCA
131 GATTCA
*
3166349 CAACACTTCGAATCAACAACACCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* * * *
3166414 GAAAAACTCATCTGAAAGATGGAGAAGAAGTTCATAATGAGAAGAACTTG-TCGACCTATTGCTT
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGC-T
3166478 A-ATTCA
130 AGATTCA
* * * * ** *
3166484 TAACACATCGAATCAACAACGCCTCTCTTGAGGGATTGACATTTCTAATTCAGAGTTCTTAATGA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* * ** * * *
3166549 AAAGAACCCATATGACAGAGGGAGAAGAATTTCTTAATGATAAGAACTTGTTCGACCTATTGCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3166614 GATTCA
131 GATTCA
* * * * * ** * * *
3166620 TAATACTTCGAATGAACAATGCATTGCTTGAGGGATTGCCATTTTCAATGGAGAGTTTCTAATGA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* * * * * *
3166685 GAAGAACGCATCTGACAGTGAGAGAAGTAGTTCATAATGAGAAGAACTTGTTCAACCTATTGCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3166750 GATTCA
131 GATTCA
* * ** * * * * * *
3166756 TAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTAATATTTCCAATAGAGAGTTCCTAATGT
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* *
3166821 GAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGATGAGAATAACTTGTTCGACCTATTGCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
*
3166885 GATTAA
131 GATTCA
* * * * * * * * *
3166891 TAAAACTTTGATTCAGCACCGCCTCACTTGAGGGATTGACATTTTCTAATAGAGAGTTCTTAATG
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATG
* * * * **
3166956 AGAAGAATTCATCCGACAGAGAGAGAAGAAGTTCCTAATGAGAATAACTTGTTCGACCTATTAAT
65 AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCT
*
3167021 CGATTCA
130 AGATTCA
* * * * *
3167028 CAACACTTCGAATCAACAATGCCTCGCTTGAGGGATTAACATTTCCAATGGAGAGTTCGTAATAA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
**
3167093 GAAGAACTCATATGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3167158 GATTCA
131 GATTCA
* * * ** * * *
3167164 CAATACTTCGAATGAACAATGCCTTGCTTGAGGGATTGCCATTTTCAATGGAGAGTTTCTAACT-
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAA-TG
* * * * *
3167228 AGAAGAACGCATCTGACAGAGGAAGAAGTAGCTCATAATGAGAAGAACTTGTTCGACCTATTGCT
65 AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCT
3167293 AGATTCA
130 AGATTCA
* * ** * *
3167300 CAACACTTCAAATTAGTAACACCTCACTTGAGGGATTGACATTTCCATTGGAGAGTTCCTAATGA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* * *
3167365 GAAAAACTCATCCAACAGATGGAGAAGAAGTTCATAATGAGAAGAACTTG-TCGACCTATTGCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3167429 GATTCA
131 GATTCA
** * *** * * * * * *
3167435 CAACAAATCAAATTTGCAAAGCCTCGCTTGAGGAATTGACATTTCTAATAGAAAGTTCCTAATGA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* * * * * *
3167500 GAAGAACTCATCGGATAGGGGGAGAAGAAGTTCATTATGAGAAGAACTTGTTCGACCTATTACTT
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3167565 GATTCA
131 GATTCA
* * * **
3167571 CAATACTTCGAATCAGCAATGCCTCACTTGAGGGATTGACATTTCCAATTCAGAGTTCCTAATGT
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG-
* ** * * * * * *
3167636 A-AAGAACCCATATGACAGATGGACAATAAGTTCAAAATGAGAATG-ACTTGTTTGACCTATTTC
65 AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAA-GAACTTGTTCGACCTATTGC
3167699 TAGATTCA
129 TAGATTCA
* * * * *
3167707 CAATAATTCGAATCAGCAATGCCTCACTTGAGGGATTGACATTTCGAATGGAGAGTTCCTAATGA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* *
3167772 GAAGAACTCATCCGACAGAGGGAGAAAAAGTTCATAATGAGAAGAACTTGTTCAACCTATTGCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3167837 GATTCA
131 GATTCA
* * ** * * * * * *
3167843 TAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTAATATTTCCAATAGAGAGTTCCTAATGT
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* * *
3167908 GAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGATGAGAATAACTTGTTCGACCTATTTCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3167972 GATTCA
131 GATTCA
* * * * * *
3167978 TAAAACTTTGAATCAGCAACGCCTCACTTGAGGGATTGACATTTTCTAATGGAGAGTTCTTAATG
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATG
* * * * **
3168043 AGAAGAATTCATCCGACAGAGAGAGAAGAAGTTCCTAATGAGAATAACTTGTTCGACCTATTAAT
65 AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCT
*
3168108 CGATTCA
130 AGATTCA
* * * * *
3168115 CAACACTTCGAATCAACAATGCCTCGCTTGAGGGATTAACATTTCCAATGGAGAGTTCATAATAA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
**
3168180 GAAGAACTCATATGACAGAGGGAGAAGACA-TTCATAATGAGAAGAACTTGTTCGACCTATTGCT
66 GAAGAACTCATCCGACAGAGGGAGAAGA-AGTTCATAATGAGAAGAACTTGTTCGACCTATTGCT
3168244 AGATTCA
130 AGATTCA
* * * ** * * * * *
3168251 CAATACTTCGAATGAACAATGCCTTGCTTGAGGGATTGCCATTTTCAATAGAGAGTTTCTAATTA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* * * * *
3168316 GAAGAACGCATCTGACAGAGGAAGAAGTAGCTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3168381 GATTCA
131 GATTCA
* * ** * * *
3168387 CAACACTTCAAATTAGTAACACCTCACTTGAGGGATTGACATTTCCATTAGAGAGTTCCTAATGA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* * *
3168452 GAAAAACTCATCCAACAGATGGAGAAGAAGTTCATAATGAGAAGAACTTG-TCGACCTATTGCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3168516 GATTCA
131 GATTCA
** * * * * * * *
3168522 CAACAAATC-AATTTAGCAAAGCCTCGCTTGAGGAATTGACATTTCTAATAGAGAGTTCCTAATG
1 CAACACTTCGAA-TCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG
* * * * *
3168586 AGAAGAACTCATCGGATAGGGGGAGAAGAAGTTCATTATGAGAAGAACTTGTTCGACCTATTACT
65 AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCT
*
3168651 TGATTCA
130 AGATTCA
* * **
3168658 CAATACTTCGAATCAGCAATC-CCTCACTTGAGGGATTGACATTTCCAATTCAGAGTTCCTAATG
1 CAACACTTCGAATCAACAA-CGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG
* ** * * * * * *
3168722 TA-AAGAACCCATATGACAGATGGACAATAAGTTCAAAATGAGAATG-ACTTGTTTGACCTATTT
65 -AGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAA-GAACTTGTTCGACCTATTG
3168785 CTAGATTCA
128 CTAGATTCA
* * * *
3168794 CAACAATTCGAATCAGCAATGCCTCACTTGAGGGATTGACATTTCGAATGGAGAGTTCCTAATGA
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* *
3168859 GAAGAACTCATCCGACAGAGGGAGAAAAAGTTCATAATGAGAAGAACTTGTTCAACCTATTGCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3168924 GATTCA
131 GATTCA
* * ** * * * * * *
3168930 TAACACTTTGAATCAACAACGAATCGCTTGAGGGTTTAATATTTCCAATAGAGAGTTCCTAATGT
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
* * * *
3168995 GAA-AACTCATCCGACAGAGGGAGAAGAAGTTCATGATGAGAATAACTTGTTTGACCTATTTCTA
66 GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
3169059 GATTCA
131 GATTCA
* * * * * *
3169065 AAAAACTTTGAATCAGCAACGCCTCACTTGAGGGATTGACATTTTCTAATGGAGAGTTCTTAATG
1 CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATG
3169130 AGAAGAA
65 AGAAGAA
3169137 GTTCCTAATG
Statistics
Matches: 2475, Mismatches: 421, Indels: 54
0.84 0.14 0.02
Matches are distributed among these distances:
134 2 0.00
135 707 0.29
136 1571 0.63
137 195 0.08
ACGTcount: A:0.35, C:0.18, G:0.20, T:0.27
Consensus pattern (136 bp):
CAACACTTCGAATCAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGA
GAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTA
GATTCA
Found at i:3169215 original size:114 final size:113
Alignment explanation
Indices: 3169015--3169249 Score: 317
Period size: 114 Copynumber: 2.1 Consensus size: 113
3169005 CCGACAGAGG
* * ** *
3169015 GAGAAGAAGTTCATGATGAGAATAACTTGTTTGACCTATTTCTAGATTCAAAAAACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAATAACTTGTTCGACCTATTAATAGATTCAAAAAACTTCGAATCA
* * * *
3169080 GCAACGCCTCACTTGAGGGATTGACATTTTCTAATGGAGAGTTCTTAAT
66 ACAACGCCTCACTTGAGGGATTAACA-TTTCCAATGGAGAGTTCGTAAT
* * * *
3169129 GAGAAGAAGTTCCTAATGAGAATAACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAATAACTTGTTCGACCTATTAATAGATTCAAAAAACTTCGAATCA
* *
3169194 ACAATGCCTCGCTTGAGGGATTAACATTTCCAATGGAGAGTTCGTAAT
66 ACAACGCCTCACTTGAGGGATTAACATTTCCAATGGAGAGTTCGTAAT
*
3169242 AAGAAGAA
1 GAGAAGAA
3169250 CTCATATGAC
Statistics
Matches: 105, Mismatches: 16, Indels: 1
0.86 0.13 0.01
Matches are distributed among these distances:
113 27 0.26
114 78 0.74
ACGTcount: A:0.35, C:0.17, G:0.19, T:0.29
Consensus pattern (113 bp):
GAGAAGAAGTTCATAATGAGAATAACTTGTTCGACCTATTAATAGATTCAAAAAACTTCGAATCA
ACAACGCCTCACTTGAGGGATTAACATTTCCAATGGAGAGTTCGTAAT
Found at i:3169367 original size:249 final size:249
Alignment explanation
Indices: 3168880--3169385 Score: 665
Period size: 249 Copynumber: 2.0 Consensus size: 249
3168870 CCGACAGAGG
* ** * *
3168880 GAGAAAAAGTTCATAATGAGAAGAACTTGTTCAACCTATTGCTAGATTCATAACACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCAACCTATTAATAGATTCACAACACTTCGAATCA
* * ** *
3168945 ACAACGAATCGCTTGAGGGTTTAATATTTCCAATAGAGAGTTCCTAATGTGAAAACTCATCCGAC
66 ACAACGAATCGCTTGAGGGATTAACATTTCCAATAGAGAGTTCCTAATAAGAAAACTCATACGAC
* * * * *
3169010 AGAGGGAGAAGAAGTTCATGATGAGAATAACTTGTTTGACCTATTTCTAGATTCAAAAAACTTTG
131 AGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCAAAAAACTTCG
*
3169075 AATCAGCAACGCCTCACTTGAGGGATTGACATTTTCTAATGGAGAG-TTCTTAAT
196 AATCAACAACGCCTCACTTGAGGGATTGACATTTTCTAATGGAGAGTTTC-TAAT
* * * *
3169129 GAGAAGAAGTTCCTAATGAGAATAACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCAACCTATTAATAGATTCACAACACTTCGAATCA
* ** * * *
3169194 ACAATGCCTCGCTTGAGGGATTAACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATATGA
66 ACAACGAATCGCTTGAGGGATTAACATTTCCAATAGAGAGTTCCTAATAAGAA-AACTCATACGA
* * *
3169259 CAGAGGGAGAAGACGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTC
130 CAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCAAAAAACTTC
* * ** *
3169324 GAATGAACAATGCCTTGCTTGAGGGATTGCCATTTTC-AATGGAGAGTTTCTAAT
195 GAATCAACAACGCCTCACTTGAGGGATTGACATTTTCTAATGGAGAGTTTCTAAT
*
3169378 TAGAAGAA
1 GAGAAGAA
3169386 CGCATCTGAC
Statistics
Matches: 220, Mismatches: 35, Indels: 4
0.85 0.14 0.02
Matches are distributed among these distances:
249 120 0.55
250 100 0.45
ACGTcount: A:0.35, C:0.17, G:0.20, T:0.29
Consensus pattern (249 bp):
GAGAAGAAGTTCATAATGAGAAGAACTTGTTCAACCTATTAATAGATTCACAACACTTCGAATCA
ACAACGAATCGCTTGAGGGATTAACATTTCCAATAGAGAGTTCCTAATAAGAAAACTCATACGAC
AGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCAAAAAACTTCG
AATCAACAACGCCTCACTTGAGGGATTGACATTTTCTAATGGAGAGTTTCTAAT
Found at i:3169383 original size:136 final size:136
Alignment explanation
Indices: 3169129--3176048 Score: 7828
Period size: 136 Copynumber: 50.9 Consensus size: 136
3169119 AGTTCTTAAT
* * ** *
3169129 GAGAAGAAGTTCCTAATGAGAATAACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * * **
3169194 ACAATGCCTCGCTTGAGGGATTAACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATATGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3169259 CAGAGG
131 CAGAGG
* * *
3169265 GAGAAGACGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* ** * * * * * *
3169330 ACAATGCCTTGCTTGAGGGATTGCCATTTTCAATGGAGAGTTTCTAATTAGAAGAACGCATCTGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3169395 CAGAGG
131 CAGAGG
* * * * * *
3169401 AAGAAGTAGCTCATAACGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCAAATTA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
** * * * *
3169466 GTAACACCTCACTTGAGGGATTGACATTTCCATTGGAGAATTCCTAATGAGAAAAACTCATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
*
3169531 CAGATG
131 CAGAGG
* * * * ** * *
3169537 GAGAAGAAGTTCATAAAGAGTAGAAC-TGGTCGACCTATTGCTATATTCACAACAAAT-AATATT
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGA-ATC
** * * * * * *
3169600 AGTAACGCCTCGCTTGAGGAATTGACATTTCTAATAGAGAGTTCCTAATGAGAAGAACTAATCAG
65 AACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
* *
3169665 ATATAGG
130 ACAGAGG
* * *
3169672 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTTGATTCACAATACTTCAAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * ** * **
3169737 GCAACGCCTCACTTGAGGTATTGACATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATG
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCG
*
3169801 ACAGATG
130 ACAGAGG
* * * * * * *
3169808 AATAATAAGTTCATAAAGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACACTTCAAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
** * * * *
3169873 GTAATGCCTCGCTTGAGGGATTGACATATCCAATAGAGAGTTCCTAATGAGAAGAACTCATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3169938 CAGAGG
131 CAGAGG
* * * *
3169944 GAGAAAAAGTTCATAATGAGAAGAACTTGTTCAACCTATTACTAGATTCACAACACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
** * * * * * *
3170009 ACAACGTATCACTTGAGGGTTTAACATTTCTAATAGAGAGTTCGTAATGAGAA-AACTTATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3170073 CAGAGG
131 CAGAGG
** * * * * *
3170079 GAGAAGAAGTTCATAGCGAGAATAACTTGTTCGACCTATTACTAGATTCACAAAACTTTGAATTA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * * *
3170144 GCAATGCCTCACTTGAGGGATTGACATTTTCTAATAGAGAGTTCCTAATGAGAATAACTCATTCG
66 ACAACGCCTCACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
3170209 ACAGAGG
130 ACAGAGG
* * * ** *
3170216 GAGAAGAAGTTCCTAATGAGAATAACATGTTCGACCTATTAATCGAATT-ACAACACTTCGAATC
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATC
* *
3170280 AACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATCCG
65 AACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
3170345 ACAGAGG
130 ACAGAGG
* * *
3170352 GAGAAGAAGTTAATAATGAGAAGAAATTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * ** * * *
3170417 ATAATGCCTTGCTTGAGGGATTGCCATTTCCAATGGAGAGTTTCTAATGAGAATAACTCATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
*
3170482 AAGAGG
131 CAGAGG
* * * * * * *
3170488 GAGAAGTAGTTTATAATGTGAAGAACTTGTTCGACCTATTGCTAGATTTACAACAATTCTAATTA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * * * * *
3170553 GCAACACCTCGCTTTAGGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTTATCAGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3170618 CAGAGG
131 CAGAGG
* * *
3170624 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTGTTGCTTA-ATTCATAACACATCGAATC
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATC
* * * ** * * * * **
3170688 AACAACGCCTCTCTTGAGAGATTGACATTTCTAATTTAGAGTTCTTAATGAAAATAACCCATATG
65 AACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
3170753 ACAGAGG
130 ACAGAGG
* * *
3170760 GAGAAGAAGTTCTTAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATGA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * ** * * * * *
3170825 ACAATGCATTGCTTGAGGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
* *
3170890 CAAAGA
131 CAGAGG
* *
3170896 GAGAAGTAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* ** * * * * * * *
3170961 ATAACGAATCAATTGAGGGTTTAATATTTCCAATAGAGAGTTCCTAATGTGAA-AATTCATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3171025 CAGAGG
131 CAGAGG
* * * * *
3171031 GAGAAGAAGTTCATGATGAGAATAACTTGTTCGACCTATTGCTAGATTCATAAAACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * * *
3171096 GA-AACGCCTCACTTGAGGGACTAACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCACCC
66 -ACAACGCCTCACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCC
3171160 GACAGAGAG
129 GACAGAG-G
* * **
3171169 AGAGAAGAAGTTCCTAATGAGAATAACTTGTTCGACCTATTAATCA-ATTCACAACACTTCGAAT
1 -GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCT-AGATTCACAACACTTCGAAT
* * * * * * **
3171233 CAACAATGCCTCGCTTGAGGGATTAATATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATAT
64 CAACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCC
3171298 GACAGAGG
129 GACAGAGG
* * * *
3171306 GAGAAGAAGTTCATAATGAGAAGAACTTGTTTGACCTATTGTTAGATTCACAATACTTCGAATGA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* *** ** * * * * *
3171371 GCAATTTCTTGCTTGAGGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
* *
3171436 CAAAGA
131 CAGAGG
* *
3171442 GAGAAGTAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* ** * * * * * * *
3171507 ATAACGAATCAATTGAGGGTTTAATATTTCCAATAGAGAGTTCCTAATGTGAA-AATTCATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3171571 CAGAGG
131 CAGAGG
* * * * *
3171577 GAGAAGAAGTTCATGATGAGAATAACTTGTTCGACCTATTGCTAGATTCATAAAACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * * *
3171642 GA-AACGCCTCACTTGAGGGACTAACATTTTCTAATGGAGAGTTCTTAATGAGAAGAATTCACCC
66 -ACAACGCCTCACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCC
*
3171706 GACAGAGA
129 GACAGAGG
* * **
3171714 GAGAAGAAGTTCCTAATGAGAATAACTTGTTCGACCTATTAATCA-ATTCACAACACTTCGAATC
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCT-AGATTCACAACACTTCGAATC
* * * * * * **
3171778 AACAATGCCTCGCTTGAGGGATTAATATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATATG
65 AACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
3171843 ACAGAGG
130 ACAGAGG
* * *
3171850 GAGAAGAAGTTCATAATGAGAAGAACTTGTTTGACCTATTGCTAGATTCACAATACTTCGAATGA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* ** * * * * * *
3171915 ACAATGCCTTGCTTGAGGGATTGCCATTTTCAATGGAGAGTTTCTAATTAGAAGAACGCATCTGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3171980 CAGAGG
131 CAGAGG
* ** * * * * *
3171986 AAGAATTAGCTCATAATGAGACGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATTA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
** * * * *
3172051 GTAACACCTCACTTGAGGGATTGACATTTCCATTGGAGAGTTCCTAATGAGAAAAACACATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
*
3172116 CAGATG
131 CAGAGG
* *
3172122 GAGAAGAAGTTCATAATGAGAAGAACTTG-TCGACCTATTGCTAGATTCACAACAAC-TCAAATT
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAC-ACTTCGAATC
* * * * * * * *
3172185 AGCAAAGCCTCGCTTGAGGAATTGACATTTCTAATAGAGAGTTCCTAATGAGAAAAACTCATCAG
65 AACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
* *
3172250 ATAGGGG
130 ACAGAGG
* * * *
3172257 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTTGATTCACAATACTTCAAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
** ** * * **
3172322 GTAACGCCTCACTTGAGGGATTGACATTTCCAATTCAGAGATCCTAATGTA-AAGAACCCATATG
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCG
*
3172386 ACAGATG
130 ACAGAGG
* * * *
3172393 GACAATAAGTTCATAATGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * * ** *
3172458 GCAATGCCTCGCTTGAGGGATTGCCATTTCAAATAAAGAGTTCCTAATGAGAAGAATTCATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
*
3172523 CTGAGG
131 CAGAGG
* * * *
3172529 GAGAAAAAGTTCATAATGAGAAGAACTTGTTCAACCTATTACTAGATTCACAACACTTAGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
** * * * * * * *
3172594 ACAACGTATCACTTGAGGGTTTAACATTTCTAATAGAGAGTTCGTAATGAGAA-AATTTATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3172658 CAGAGG
131 CAGAGG
* * * * *
3172664 GAGAAGAAGTTCATAATGAGAATAACTTGTTCGACCTATTACTAGATTCACAAAACTTTGAATTA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * * * * * * *
3172729 GCAATGCATCACTTGAGGGATTGATATTTTCTAATAGCGAGTTCCTATTGAGAATAACTCATTCG
66 ACAACGCCTCACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
3172794 ACAGAGG
130 ACAGAGG
* * * * ** *
3172801 GAGAAGAAGTTCCTAATGAAAATAACATGTTCGACCTATTAATCGAATT-ACAACACTTCGAATC
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATC
* * *
3172865 AACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCGTAGTAAGAAGAACTCATCCG
65 AACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
3172930 ACAGAGG
130 ACAGAGG
* * * *
3172937 GAGAAGAAGTTAATAATGAGAAGAAATTGTTTGACCTATTGCTAGATTCACAACACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * ** * * * * *
3173002 ATAATGCCTTGCTTGAGGGATTGCCATTTCCAATGGAGAGTTTCTAATGACAATAACTCATCCAA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
*
3173067 AAGAGG
131 CAGAGG
* *
3173073 GAGAAGTAGTTCATAATGTGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * *
3173138 ACAACACCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGAAAAACTCATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
*
3173203 CAGATG
131 CAGAGG
* *
3173209 GAGAAGAAGTTCATAATGAGAAGAACTTG-TCGACCTATTGCTTA-ATTCATAACACATCGAATC
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATC
* * * ** * * * **
3173272 AACAACGCCTCTCTTGAGGGATTGTCATTTCTAATTCAGAGTTCTTAATGAAAAGAACCCATATG
65 AACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
3173337 ACAGAGG
130 ACAGAGG
* * * *
3173344 GAGAAGAAGTTCTTAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCATAATACTTCGAATGA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * ** * * * * *
3173409 ACAATGCATTGCTTGAGGGATTGCCATTTTCAATGGAGAGTTTCTAATGAGAAGAACGCATCTGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
* *
3173474 CAGTGA
131 CAGAGG
* * * *
3173480 GAGAAGTAGTTCATAATGAGAAGAACTTGTTCAACCTATTGCTAGATTCATAACACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
*** * * * * * *
3173545 ACAACAAATCGCTTGAGGGTTTAATATTTCCAATAGAGAGTTCCTAATGTGAA-AACTCATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3173609 CAGAGG
131 CAGAGG
* * * * * *
3173615 GAGAAGAAGTTCATGATGAGAATAACTTGTTCGACCTATTGCTAGATTAATAAAACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * *
3173680 GCAACGCCTCACTTGAGGGATTGACATTTTCTAATAGAGAGTTCTTAATGAGAAGAATTCATCCG
66 ACAACGCCTCACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
*
3173745 ACAGAGA
130 ACAGAGG
* * ** *
3173752 GAGAAGAAGTTCCTAATGAGAATAACTTGTTCGACCTATTAATCGATTCACAACACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * * * **
3173817 ACAATGCCTCGCTTGAGGGATTAACATTTCCAATTGAGAGTTCGTAATAAGAAGAACTCATATGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3173882 CAGAGG
131 CAGAGG
*
3173888 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAATACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* ** * * * * * * *
3173953 ACAATGCCTTGCTTGAAGGATTGTCATTTTCAATGGAGAGTTTCTAATTAGAAGAACACATCTGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3174018 CAGAGG
131 CAGAGG
* * * *
3174024 AAGAAGTAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCAAATTA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
** * * * * *
3174089 GTAACACCTCACTTGAGGGATTGACATTTCCATTGGAGAGTTCCTAATGGGAAAAACTCATACGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
*
3174154 CAGATG
131 CAGAGG
** * * ** * *
3174160 TTGAATAAGTTAATAATGAGAAGAACTTG-TCGACCTATTGCTAGATTCACAACAAATCAAATTA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * * * * * *
3174224 GCAAGGCCTCGCTTGAGGAATTGACATTTCTAATAGAGAGTTCCTAATGAGAATAACTTATCAGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
* *
3174289 TAGGGG
131 CAGAGG
* * * *
3174295 GAGAAGAAGTTCATAATGAGAAGAACTTGTTTGACCTATTGCTTGATTCACAATACTTCAAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * ** * **
3174360 GCAACGCCTCACTTGAGGGATTGATATTTCCAATTCAGAGTTCCTAATGTA-AAGAACCCATATG
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG-AGAAGAACTCATCCG
*
3174424 ACAGATG
130 ACAGAGG
* * * *
3174431 GACAATAAGTTCATAATGAGAAGGACTTGTTTGACCTATTGCTAGATTCACAACACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
** * * *
3174496 GTAATGCCTCGCTTGAGGGATTGACATTTCCAATGGAGTGTTCCTAATGAGAAGAACTCATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3174561 CAGAGG
131 CAGAGG
* * * * *
3174567 GAGAAAAACTTCATAATGAGAAGAACTTGTTCAACCTATTACTAGATTCACAACACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
** * * * * * *
3174632 ACAACGTATCACTTGAGGGTTTAACATTTCTAATAGAGAGTTCGTAATGAGAA-AACTTATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3174696 CAGAGG
131 CAGAGG
* * * * *
3174702 GAGAAGAAATTCATAATGAGAATAACTTGTTCGACCTATTACTAGATTCACAAAACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * *
3174767 GCAACGCCTCACTTGAGGGATTGATATTTTCTAATAGAGAGTTCCTAATGAGAAGAACTCATTCG
66 ACAACGCCTCACTTGAGGGATTGACA-TTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
3174832 ACAGAGG
130 ACAGAGG
* * * ** *
3174839 GAGAAGAAGTTCCTAATGAGAATAACATGTTCGACCTATTAATCGAATT-ACAACACTTCGAATC
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAG-ATTCACAACACTTCGAATC
* * *
3174903 AACAACGCCTCACTTGAGGGATTGAAATTTCCAATGGAGAGTTCGTAATAAGAAGAACTCATCCG
65 AACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
3174968 ACAGAGG
130 ACAGAGG
* * * *
3174975 GAGAAGAAGTTAATAATGATAAGAACTTGTTTGACCTATTGCTAGATTCACAACACTTTGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * ** * ** *
3175040 ATAATGCCTTGCTTGAGGGATTGCCATTTCCAATGGAGAGTTTGTAATGAGAATAACTCATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3175105 CAGAGG
131 CAGAGG
* *
3175111 GAGAAGTAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * *
3175176 GCAACACCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAAAACTCATCCGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
*
3175241 CAGACG
131 CAGAGG
* * * * *
3175247 GAGAAGAAGTTCATAATGAGAAGAACTTCTTCGACCTATTGCTAGATTTACAACAATTCTAATTA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * * *
3175312 GA-AATGCCTCGCTTTAGGAATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCAG
66 -ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
*
3175376 ACAGGGG
130 ACAGAGG
* *
3175383 GAGAAGAAGTTCATAATTAGAAGAACTTGTTCGACCTATTGCTTA-ATTCACAACACATCGAATC
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGC-TAGATTCACAACACTTCGAATC
* * ** * * * **
3175447 AACAACGCCTCTCTTGAGAGATTGACATTTCCAATTCAGAGTTCTTAATGAAAAGAACCCATATG
65 AACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
*
3175512 GCAGAGG
130 ACAGAGG
* * *
3175519 GAGAAGAAGTTCTTAATGAGAAGAACTTGTTTGACCTATTTCTAGATTCACAACACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * *
3175584 GCAACGCCTCTCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAAAAGAACTCATCTGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
3175649 CAGAGG
131 CAGAGG
* * * * **
3175655 GAGAAGAGGTTCATAATGAGAAGAACTTGTTCGACTTATTACTAGATTCACAACTCTTTAAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * **
3175720 ACAACGCCTCACTTGGGGGATTGATATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATATGA
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
*
3175785 AAGAGG
131 CAGAGG
* * * ** *
3175791 GAGGAA-AAGTTCTTAATGAGAAGAAATTGTTTGACCTATTGCTCTATTCACAAAACTTCGAATC
1 GA-GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATC
* * * *
3175855 AGCAACGCTTCGCTTGAGGGATTGACATTTCCAATGGAAAGTTCCTAATGAGAAGAACTCATCCG
65 AACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCG
3175920 ACAGAGG
130 ACAGAGG
* * * * * *
3175927 GAGAAGAAGTCCATAATGAAAATAACTTGTTCGACCTATTGCTATATTAATAACACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
* * * * * * * *
3175992 ACAACACCTCACTTGAGGGACTAACATTTCTAGTAGAGAGCTCATAATGAGAAGAAC
66 ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAAC
3176049 CCATAGCTTG
Statistics
Matches: 5733, Mismatches: 999, Indels: 104
0.84 0.15 0.02
Matches are distributed among these distances:
134 2 0.00
135 1040 0.18
136 4080 0.71
137 485 0.08
138 49 0.01
139 76 0.01
140 1 0.00
ACGTcount: A:0.36, C:0.17, G:0.20, T:0.27
Consensus pattern (136 bp):
GAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCA
ACAACGCCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA
CAGAGG
Found at i:3177368 original size:172 final size:173
Alignment explanation
Indices: 3177112--3177452 Score: 540
Period size: 172 Copynumber: 2.0 Consensus size: 173
3177102 TAATTCAATC
* * **
3177112 CCATTTATTATTTTAATATTTTCCGAATCTGTTCTCAATTTCATAAAATTAACTATATTTATTCT
1 CCATTTATTATTTTAATATTTTCCAAATCTGTTCTCAATTACATAAAATTAACTATATTTATGAT
* *
3177177 AAAATTTTATTTTCCTTTAATTTTGTCGTTTGCTTCCTTTGACTATA-TTTTTTTCTTTACTTAA
66 AAAATTTTAATTTCCTTTAATTTTGTCGTTTGCTTCCTTTGACTATACTTTTTTTCTGTACTTAA
* *
3177241 ATTTCCTTTTAAAGCATGTTGATTTACTACCCTTTGTTAATTA
131 ATTTCCTTTTAAAGCATGTTGATATACTACCATTTGTTAATTA
* *
3177284 CCATTTATTATTTTAATATTTTCCAAATCTGTTGTCAATTACATAAAATTAGCTATATTTATGAT
1 CCATTTATTATTTTAATATTTTCCAAATCTGTTCTCAATTACATAAAATTAACTATATTTATGAT
* *
3177349 AATATTTTAATTTCCTTTAATTTTGTCGTTTGCTTTCTTTGACTATATCTTTTTTTCTGTACTTA
66 AAAATTTTAATTTCCTTTAATTTTGTCGTTTGCTTCCTTTGACTATA-CTTTTTTTCTGTACTTA
* *
3177414 AATTTCCTTTTATAGCATGTTTATATACTACCATTTGTT
130 AATTTCCTTTTAAAGCATGTTGATATACTACCATTTGTT
3177453 TCTATCATAT
Statistics
Matches: 153, Mismatches: 14, Indels: 2
0.91 0.08 0.01
Matches are distributed among these distances:
172 103 0.67
174 50 0.33
ACGTcount: A:0.26, C:0.14, G:0.06, T:0.53
Consensus pattern (173 bp):
CCATTTATTATTTTAATATTTTCCAAATCTGTTCTCAATTACATAAAATTAACTATATTTATGAT
AAAATTTTAATTTCCTTTAATTTTGTCGTTTGCTTCCTTTGACTATACTTTTTTTCTGTACTTAA
ATTTCCTTTTAAAGCATGTTGATATACTACCATTTGTTAATTA
Found at i:3180409 original size:32 final size:33
Alignment explanation
Indices: 3180366--3180492 Score: 105
Period size: 32 Copynumber: 3.7 Consensus size: 33
3180356 CTATTGGGCA
*
3180366 TGATATCCTTCGTCGTGAAGTTGAAATAGTGGG
1 TGATATCCTTCGTCGTGAAGTTGAAATTGTGGG
* *
3180399 TGAT-TCCTTCGACGTGAAGTTAAGTCAAAAATTTTGGG
1 TGATATCCTTCGTCGTGAAGTT--G----AAATTGTGGG
*
3180437 TACGATATCCTTCGTTGTGAAGTTGAAATTGTGGG
1 T--GATATCCTTCGTCGTGAAGTTGAAATTGTGGG
* * *
3180472 TGA-CTCATTCGTCATGAAGTT
1 TGATATCCTTCGTCGTGAAGTT
3180493 AAGTCCGTAT
Statistics
Matches: 75, Mismatches: 10, Indels: 19
0.72 0.10 0.18
Matches are distributed among these distances:
32 30 0.40
33 6 0.08
34 1 0.01
35 10 0.13
38 9 0.12
39 1 0.01
40 3 0.04
41 15 0.20
ACGTcount: A:0.25, C:0.13, G:0.26, T:0.35
Consensus pattern (33 bp):
TGATATCCTTCGTCGTGAAGTTGAAATTGTGGG
Found at i:3180707 original size:22 final size:22
Alignment explanation
Indices: 3180680--3180727 Score: 87
Period size: 22 Copynumber: 2.2 Consensus size: 22
3180670 TGTTCTTATG
*
3180680 TATGCCTAAAATGTATATGTAA
1 TATGCCTAAAATGCATATGTAA
3180702 TATGCCTAAAATGCATATGTAA
1 TATGCCTAAAATGCATATGTAA
3180724 TATG
1 TATG
3180728 TTATCAGCTT
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
22 25 1.00
ACGTcount: A:0.40, C:0.10, G:0.15, T:0.35
Consensus pattern (22 bp):
TATGCCTAAAATGCATATGTAA
Found at i:3192278 original size:5 final size:5
Alignment explanation
Indices: 3192236--3192274 Score: 62
Period size: 5 Copynumber: 8.0 Consensus size: 5
3192226 TATAATTTAA
*
3192236 ATTT- ATTTC ATTTC ATTTC ATTTC ATTTC ATTTC CTTTC
1 ATTTC ATTTC ATTTC ATTTC ATTTC ATTTC ATTTC ATTTC
3192275 CTTTAATTTT
Statistics
Matches: 33, Mismatches: 1, Indels: 1
0.94 0.03 0.03
Matches are distributed among these distances:
4 4 0.12
5 29 0.88
ACGTcount: A:0.18, C:0.21, G:0.00, T:0.62
Consensus pattern (5 bp):
ATTTC
Found at i:3192283 original size:15 final size:15
Alignment explanation
Indices: 3192230--3192283 Score: 56
Period size: 15 Copynumber: 3.6 Consensus size: 15
3192220 TTCTATTATA
3192230 ATTTAAATTT-ATTTC
1 ATTT-AATTTCATTTC
*
3192245 ATTTCATTTCATTTC
1 ATTTAATTTCATTTC
* *
3192260 ATTTCATTTCCTTTC
1 ATTTAATTTCATTTC
*
3192275 CTTTAATTT
1 ATTTAATTT
3192284 TTAATTTGTT
Statistics
Matches: 34, Mismatches: 4, Indels: 2
0.85 0.10 0.05
Matches are distributed among these distances:
14 4 0.12
15 30 0.88
ACGTcount: A:0.22, C:0.17, G:0.00, T:0.61
Consensus pattern (15 bp):
ATTTAATTTCATTTC
Found at i:3195724 original size:25 final size:26
Alignment explanation
Indices: 3195671--3195759 Score: 76
Period size: 26 Copynumber: 3.5 Consensus size: 26
3195661 AATAAAGAAT
* *
3195671 AAAAAAGTAAAAATA-AGAGAA-AGAGA
1 AAAAAAG-AAAAAGAGAGAGAAGA-AAA
* *
3195697 AAAAATGAAGAAGAGAGAG-AGAAAA
1 AAAAAAGAAAAAGAGAGAGAAGAAAA
* *
3195722 AAAAAAGAAAAAGATAGAGAAGGAAA
1 AAAAAAGAAAAAGAGAGAGAAGAAAA
*
3195748 AAAAAGGAAAAA
1 AAAAAAGAAAAA
3195760 AGAAAAAAAA
Statistics
Matches: 51, Mismatches: 9, Indels: 6
0.77 0.14 0.09
Matches are distributed among these distances:
25 24 0.47
26 27 0.53
ACGTcount: A:0.73, C:0.00, G:0.22, T:0.04
Consensus pattern (26 bp):
AAAAAAGAAAAAGAGAGAGAAGAAAA
Found at i:3195729 original size:22 final size:22
Alignment explanation
Indices: 3195679--3195770 Score: 73
Period size: 22 Copynumber: 4.2 Consensus size: 22
3195669 ATAAAAAAGT
*
3195679 AAAAATAAGAGAAAGAGAAAAA
1 AAAAAGAAGAGAAAGAGAAAAA
** *
3195701 ATGAAGAAGAGAGAGAGAAAAA
1 AAAAAGAAGAGAAAGAGAAAAA
* *
3195723 AAAAAGAAAAAGATAGAGAAGGAAA
1 AAAAAG-AAGAGAAAGAGAA--AAA
*
3195748 AAAAAG--GA-AAAAAGAAAAA
1 AAAAAGAAGAGAAAGAGAAAAA
3195767 AAAA
1 AAAA
3195771 GGAAAAAATA
Statistics
Matches: 56, Mismatches: 11, Indels: 9
0.74 0.14 0.12
Matches are distributed among these distances:
19 7 0.12
21 6 0.11
22 23 0.41
23 11 0.20
25 9 0.16
ACGTcount: A:0.75, C:0.00, G:0.22, T:0.03
Consensus pattern (22 bp):
AAAAAGAAGAGAAAGAGAAAAA
Found at i:3195756 original size:10 final size:10
Alignment explanation
Indices: 3195741--3195778 Score: 53
Period size: 10 Copynumber: 4.0 Consensus size: 10
3195731 AAAGATAGAG
3195741 AAGGAAAAAA
1 AAGGAAAAAA
3195751 AAGG--AAAA
1 AAGGAAAAAA
*
3195759 AAGAAAAAAA
1 AAGGAAAAAA
3195769 AAGGAAAAAA
1 AAGGAAAAAA
3195779 TAAAAAGATA
Statistics
Matches: 24, Mismatches: 2, Indels: 4
0.80 0.07 0.13
Matches are distributed among these distances:
8 7 0.29
10 17 0.71
ACGTcount: A:0.82, C:0.00, G:0.18, T:0.00
Consensus pattern (10 bp):
AAGGAAAAAA
Found at i:3195766 original size:18 final size:18
Alignment explanation
Indices: 3195745--3195784 Score: 71
Period size: 18 Copynumber: 2.2 Consensus size: 18
3195735 ATAGAGAAGG
3195745 AAAAAAAAGGAAAAAAGA
1 AAAAAAAAGGAAAAAAGA
*
3195763 AAAAAAAAGGAAAAAATA
1 AAAAAAAAGGAAAAAAGA
3195781 AAAA
1 AAAA
3195785 GATAGAAAAC
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
18 21 1.00
ACGTcount: A:0.85, C:0.00, G:0.12, T:0.03
Consensus pattern (18 bp):
AAAAAAAAGGAAAAAAGA
Found at i:3195867 original size:5 final size:5
Alignment explanation
Indices: 3195859--3195894 Score: 72
Period size: 5 Copynumber: 7.2 Consensus size: 5
3195849 ACACAAAAGA
3195859 AAAAT AAAAT AAAAT AAAAT AAAAT AAAAT AAAAT A
1 AAAAT AAAAT AAAAT AAAAT AAAAT AAAAT AAAAT A
3195895 CGCACAAGCA
Statistics
Matches: 31, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
5 31 1.00
ACGTcount: A:0.81, C:0.00, G:0.00, T:0.19
Consensus pattern (5 bp):
AAAAT
Found at i:3197032 original size:12 final size:12
Alignment explanation
Indices: 3197015--3197042 Score: 56
Period size: 12 Copynumber: 2.3 Consensus size: 12
3197005 TTTGCTTTAT
3197015 TTTCTTTGGTTA
1 TTTCTTTGGTTA
3197027 TTTCTTTGGTTA
1 TTTCTTTGGTTA
3197039 TTTC
1 TTTC
3197043 GGATTTTTGT
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 16 1.00
ACGTcount: A:0.07, C:0.11, G:0.14, T:0.68
Consensus pattern (12 bp):
TTTCTTTGGTTA
Found at i:3197672 original size:39 final size:37
Alignment explanation
Indices: 3197542--3197846 Score: 260
Period size: 37 Copynumber: 8.3 Consensus size: 37
3197532 CATAATAATG
*
3197542 AAAACTATATA--ATATA--TTTTCCAAAATATGTTTTC
1 AAAACTATATATTATATACGTTTT-CAAAATAT-TTTTT
* *
3197577 AAAAGT-TATATTATAT--G-TTTCAAAAATTGTTTTTT
1 AAAACTATATATTATATACGTTTTC-AAAA-TATTTTTT
3197612 AGAAACTATATA-T-TATACGTTTTCAAAAGTATTTTTT
1 A-AAACTATATATTATATACGTTTTCAAAA-TATTTTTT
*
3197649 AAAACCTATATATTATATACGTTTTCAAAAATGTTTTTT
1 AAAA-CTATATATTATATACGTTTTC-AAAATATTTTTT
* * * *
3197688 AAAAACTATATATTATATACGTTCTCAAACGT-GTTTTC
1 -AAAACTATATATTATATACGTTTTCAAA-ATATTTTTT
* *
3197726 AAAAATATATATTATATACGTTTTCAAAA-ATGTTTTC
1 AAAACTATATATTATATACGTTTTCAAAATAT-TTTTT
* *
3197763 AAAACTATATATTATATACATTTACAAAA-ATGTTTTT
1 AAAACTATATATTATATACGTTTTCAAAATAT-TTTTT
* * *
3197800 AAAACAATATATTATATACATTTTCAAAA-ATGTTTTC
1 AAAACTATATATTATATACGTTTTCAAAATAT-TTTTT
3197837 AAAACTATAT
1 AAAACTATAT
3197847 TATATTATCA
Statistics
Matches: 229, Mismatches: 23, Indels: 34
0.80 0.08 0.12
Matches are distributed among these distances:
34 5 0.02
35 20 0.09
36 14 0.06
37 131 0.57
38 12 0.05
39 39 0.17
40 8 0.03
ACGTcount: A:0.42, C:0.10, G:0.05, T:0.44
Consensus pattern (37 bp):
AAAACTATATATTATATACGTTTTCAAAATATTTTTT
Found at i:3197695 original size:76 final size:77
Alignment explanation
Indices: 3197542--3197835 Score: 330
Period size: 74 Copynumber: 4.0 Consensus size: 77
3197532 CATAATAATG
*
3197542 AAAACTATATA--ATATA--TTTTCCAAAATATGTTTTCAAAAGT-TATATTATAT--G-TTTCA
1 AAAACTATATATTATATACGTTTT-CAAAATATGTTTTCAAAACTATATATTATATACGTTTTCA
3197599 AAAATTGTTTTTTA
65 AAAA-TGTTTTTTA
* *
3197613 GAAACTATATA-T-TATACGTTTTCAAAAGTAT-TTTTTAAAACCTATATATTATATACGTTTTC
1 AAAACTATATATTATATACGTTTTCAAAA-TATGTTTTCAAAA-CTATATATTATATACGTTTTC
3197675 AAAAATGTTTTTTA
64 AAAAATGTTTTTTA
* ** *
3197689 AAAACTATATATTATATACGTTCTC-AAACGTGTTTTCAAAAATATATATTATATACGTTTTCAA
1 AAAACTATATATTATATACGTTTTCAAAATATGTTTTCAAAACTATATATTATATACGTTTTCAA
*
3197753 AAATG--TTTTC
66 AAATGTTTTTTA
* * * * *
3197763 AAAACTATATATTATATACATTTACAAAA-ATGTTTTTAAAACAATATATTATATACATTTTCAA
1 AAAACTATATATTATATACGTTTTCAAAATATGTTTTCAAAACTATATATTATATACGTTTTCAA
3197827 AAATGTTTT
66 AAATGTTTT
3197836 CAAAACTATA
Statistics
Matches: 190, Mismatches: 18, Indels: 25
0.82 0.08 0.11
Matches are distributed among these distances:
71 14 0.07
72 13 0.07
73 8 0.04
74 71 0.37
75 3 0.02
76 50 0.26
77 21 0.11
78 10 0.05
ACGTcount: A:0.41, C:0.09, G:0.05, T:0.44
Consensus pattern (77 bp):
AAAACTATATATTATATACGTTTTCAAAATATGTTTTCAAAACTATATATTATATACGTTTTCAA
AAATGTTTTTTA
Found at i:3198602 original size:73 final size:72
Alignment explanation
Indices: 3198500--3198708 Score: 240
Period size: 73 Copynumber: 2.9 Consensus size: 72
3198490 AGATCTATTA
* * * *
3198500 GGTACGATATCCTTCATCGTCAAGTTGAAATTGTGGGTGATTCTTTTGACATGAAGTTAAGTCGA
1 GGTACGATATCCTTCATTGTGAAGTTGAAATTGTGGGTGACTC-TTTGACATGAAGTTAAGTCAA
*
3198565 AACTTTTG
65 AAATTTTG
* * * * * *
3198573 GGTACAATATCCTTTATTGTGAAGCTGAAATAT-TGGGTGACTCCTTCGTCATGAAGTTAAGTAA
1 GGTACGATATCCTTCATTGTGAAGTTGAAAT-TGTGGGTGACT-CTTTGACATGAAGTTAAGTCA
3198637 AAAATTTTG
64 AAAATTTTG
* * * *
3198646 GGTACGATATCCTTCGTTGTGAAGTTGAAATCGTGGGTGACTCCTTCATCATGAAGTTAAGTC
1 GGTACGATATCCTTCATTGTGAAGTTGAAATTGTGGGTGACTCTTTGA-CATGAAGTTAAGTC
3198709 CGTATTGAAT
Statistics
Matches: 111, Mismatches: 21, Indels: 8
0.79 0.15 0.06
Matches are distributed among these distances:
72 2 0.02
73 107 0.96
74 2 0.02
ACGTcount: A:0.27, C:0.14, G:0.23, T:0.35
Consensus pattern (72 bp):
GGTACGATATCCTTCATTGTGAAGTTGAAATTGTGGGTGACTCTTTGACATGAAGTTAAGTCAAA
AATTTTG
Found at i:3206107 original size:20 final size:21
Alignment explanation
Indices: 3206079--3206120 Score: 68
Period size: 21 Copynumber: 2.0 Consensus size: 21
3206069 AATAAAACTA
3206079 TATAATATAT-TTTCAAAAAT
1 TATAATATATGTTTCAAAAAT
*
3206099 TATATTATATGTTTCAAAAAT
1 TATAATATATGTTTCAAAAAT
3206120 T
1 T
3206121 GTTTTTTAAA
Statistics
Matches: 20, Mismatches: 1, Indels: 1
0.91 0.05 0.05
Matches are distributed among these distances:
20 9 0.45
21 11 0.55
ACGTcount: A:0.45, C:0.05, G:0.02, T:0.48
Consensus pattern (21 bp):
TATAATATATGTTTCAAAAAT
Found at i:3206176 original size:39 final size:36
Alignment explanation
Indices: 3206121--3206402 Score: 248
Period size: 37 Copynumber: 7.6 Consensus size: 36
3206111 TTCAAAAATT
* *
3206121 GTTTTTTAAAAAATATATATTATACT-TTTTTCAAAA
1 GTTTTTTAAAAACTATATATTATA-TACTTTTCAAAA
3206157 GTATTTTTAAAAACTATATATTATATACGTTTTCAAAAA
1 GT-TTTTTAAAAACTATATATTATATAC-TTTTC-AAAA
3206196 TGTTTTTTAAAAACTATATATTATATACTTTTCAAAA
1 -GTTTTTTAAAAACTATATATTATATACTTTTCAAAA
* *
3206233 ATGTTTTT-AAAACTATATATTATATATGTTTTCGAAAA
1 GT-TTTTTAAAAACTATATATTATATA-CTTTTC-AAAA
* **
3206271 -TGTTTTCGAAACTATATATTATATACGTTTTCAAAA
1 GTTTTTTAAAAACTATATATTATATAC-TTTTCAAAA
* * * * *
3206307 ATGTTTTCAAAACTTTATATTATATATGTTTTCAAAA
1 GTTTTTTAAAAACTATATATTATATA-CTTTTCAAAA
* * * * *
3206344 -TCTTTTCAAAACTGTATATTATATGCATTTTGAAAA
1 GTTTTTTAAAAACTATATATTATATAC-TTTTCAAAA
* * * *
3206380 ATGTTTTCAAAACTATATTTTAT
1 GTTTTTTAAAAACTATATATTAT
3206403 TATCATTATA
Statistics
Matches: 214, Mismatches: 18, Indels: 27
0.83 0.07 0.10
Matches are distributed among these distances:
36 60 0.28
37 109 0.51
38 14 0.07
39 29 0.14
40 2 0.01
ACGTcount: A:0.39, C:0.08, G:0.06, T:0.47
Consensus pattern (36 bp):
GTTTTTTAAAAACTATATATTATATACTTTTCAAAA
Found at i:3206291 original size:112 final size:109
Alignment explanation
Indices: 3206110--3206402 Score: 333
Period size: 110 Copynumber: 2.6 Consensus size: 109
3206100 ATATTATATG
* * *
3206110 TTTCAAAAATTGTTTTTTAAAAAATATATATTATACTTTTTTC-AAAAGTATTTTTAAAAACTAT
1 TTTCAAAAA-TG-TTTTT-AAAACTATATATTATA-TTTTTTCGAAAA-T-GTTTTCAAAACTAT
3206174 ATATTATATACGTTTTCAAAAATGTTTTTTAAAAACTATATATTATATA-CT
60 ATATTATATACGTTTTCAAAAATG--TTTTAAAAACTATATATTATATATCT
*
3206225 TTTCAAAAATGTTTTTAAAACTATATATTATATATGTTTTCGAAAATGTTTTCGAAACTATATAT
1 TTTCAAAAATGTTTTTAAAACTATATATTATAT-T-TTTTCGAAAATGTTTTCAAAACTATATAT
* * *
3206290 TATATACGTTTTCAAAAATGTTTTCAAAACTTTATATTATATATGT
64 TATATACGTTTTCAAAAATGTTTTAAAAACTATATATTATATATCT
* * * * *
3206336 TTTC-AAAATCTTTTCAAAACTGTATATTATATGCATTTT-GAAAAATGTTTTCAAAACTATATT
1 TTTCAAAAATGTTTTTAAAACTATATATTATAT--TTTTTCG-AAAATGTTTTCAAAACTATATA
3206399 TTAT
63 TTAT
3206403 TATCATTATA
Statistics
Matches: 158, Mismatches: 14, Indels: 17
0.84 0.07 0.09
Matches are distributed among these distances:
109 1 0.01
110 74 0.47
111 6 0.04
112 51 0.32
113 11 0.07
114 6 0.04
115 9 0.06
ACGTcount: A:0.39, C:0.08, G:0.05, T:0.47
Consensus pattern (109 bp):
TTTCAAAAATGTTTTTAAAACTATATATTATATTTTTTCGAAAATGTTTTCAAAACTATATATTA
TATACGTTTTCAAAAATGTTTTAAAAACTATATATTATATATCT
Found at i:3206350 original size:73 final size:73
Alignment explanation
Indices: 3206124--3206402 Score: 330
Period size: 73 Copynumber: 3.8 Consensus size: 73
3206114 AAAAATTGTT
* * * * *
3206124 TTTTAAAAAATATATATTATACT-TTTTTCAAAAGTAT-TTTTAAAAACTATATATTATATACGT
1 TTTTCAAAACTATATATTATA-TACTTTTCAAAA--ATGTTTTCAAAACTATATATTATATATGT
*
3206187 TTTCAAAAATGTT
63 TTTCAAAAA--TC
* *
3206200 TTTTAAAAACTATATATTATATACTTTTCAAAAATGTTTTTAAAACTATATATTATATATGTTTT
1 TTTTCAAAACTATATATTATATACTTTTCAAAAATGTTTTCAAAACTATATATTATATATGTTTT
* *
3206265 CGAAAATG
66 CAAAAATC
* *
3206273 TTTTCGAAACTATATATTATATACGTTTTCAAAAATGTTTTCAAAACTTTATATTATATATGTTT
1 TTTTCAAAACTATATATTATATAC-TTTTCAAAAATGTTTTCAAAACTATATATTATATATGTTT
3206338 TC-AAAATC
65 TCAAAAATC
* * * *
3206346 TTTTCAAAACTGTATATTATATGCATTTTGAAAAATGTTTTCAAAACTATATTTTAT
1 TTTTCAAAACTATATATTATATAC-TTTTCAAAAATGTTTTCAAAACTATATATTAT
3206403 TATCATTATA
Statistics
Matches: 182, Mismatches: 18, Indels: 9
0.87 0.09 0.04
Matches are distributed among these distances:
73 78 0.43
74 42 0.23
75 33 0.18
76 29 0.16
ACGTcount: A:0.39, C:0.08, G:0.05, T:0.47
Consensus pattern (73 bp):
TTTTCAAAACTATATATTATATACTTTTCAAAAATGTTTTCAAAACTATATATTATATATGTTTT
CAAAAATC
Found at i:3206980 original size:28 final size:29
Alignment explanation
Indices: 3206914--3206981 Score: 86
Period size: 28 Copynumber: 2.4 Consensus size: 29
3206904 AGGACGCAAG
*
3206914 AAGTCAACCTGAAACACATTACCTCCCCT
1 AAGTCAACCTAAAACACATTACCTCCCCT
* *
3206943 AA-TTAACCTAAAACACATTACCTTCCC-
1 AAGTCAACCTAAAACACATTACCTCCCCT
*
3206970 AAGTCAGCCTAA
1 AAGTCAACCTAA
3206982 GCTTTATATC
Statistics
Matches: 33, Mismatches: 5, Indels: 3
0.80 0.12 0.07
Matches are distributed among these distances:
27 2 0.06
28 29 0.88
29 2 0.06
ACGTcount: A:0.38, C:0.34, G:0.06, T:0.22
Consensus pattern (29 bp):
AAGTCAACCTAAAACACATTACCTCCCCT
Found at i:3209858 original size:136 final size:136
Alignment explanation
Indices: 3209586--3211990 Score: 2423
Period size: 136 Copynumber: 17.9 Consensus size: 136
3209576 AAACCAATTA
* * *
3209586 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGAAGAAGAAGTTCATGAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
* * * * * * * * * *
3209651 GAGATGATCTTGGTT-AACCTAGTGCTCA-ATTCATAACACTTAGAATTAGTAACGTCTCACTTT
66 GAGAAGAACTT-GTTCGACCTATTGCT-AGATTCACAACACTTCGAATCAGCAACGCCTCACTTG
3209714 AGGGATTG
129 AGGGATTG
* * * *
3209722 AAATTTCCAATGGAAAGTTCCTAATAAGAAGAACTCATCCAATAGAGGGAGAAGAAGTTCATAAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
* * * * *
3209787 GAGAAGAACTTGTTCGACCTATTACTAGATTCACAACACTTTGAATCAACAACGCCACGCTTGAG
66 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAG
*
3209852 GCATTG
131 GGATTG
* * ** * * * *
3209858 ACATTTTCAATGGAGAGTTCCTAATGAGGGAGAA-GAATTTC-ATA-A-TGAGAAGAACTT-GT-
1 ACATTTCCAATGGAGAGTTCCTAATGA-GAAGAACTCA-TCCGATAGAGGGAGAAGAAGTTCATA
* *** * * ** * * * * **
3209917 -T-TGACCTA-TTGCTAGA--T-TCACAACACTT--CAA-A--TC--AGCAAC-A--CCTTGCTT
64 ATGAGAAGAACTTGTTCGACCTATTGCTAGA-TTCACAACACTTCGAATCAGCAACGCCTCACTT
3209966 GAGGGATTG
128 GAGGGATTG
* * ** * * *
3209975 ATATTTTCAATTTAGAGTTCTTAATGAAAAGAACTCATCTGATAGAGGGAGAAGAAGTTCATAAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
* * * * * *
3210040 GAGAAAAACTTGTTTGACCTATTGCAAGATTCACAACACTTCGGATCAGTAATGCCTCACTTGAG
66 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAG
3210105 GGATTG
131 GGATTG
* * *
3210111 ACATTTACAATAGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
** * * ** *
3210176 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACTTTTCGAATTAGCAACACCTTGCTTAAG
66 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAG
3210241 GGATTG
131 GGATTG
* * * * * * *
3210247 ACATTTCTAATGGAGAGTTCCTAATGATAAGAACTCATCTGAAAGAGGGAGGAGAACTTCATGAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
** ** * ** * ** * *
3210312 GAGAAGAACTTGTTCGACCTATTAATCTATTCACAAAACTTCGAATCAATAATGTTTCGCGTGAG
66 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAG
*
3210377 GGATCG
131 GGATTG
**
3210383 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGCCAGAGGGAGAAGAAGTTCATAAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
* * * * * *
3210448 GAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCAAATCAACAACGTCGCACTTGAA
66 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAG
3210513 GGATTG
131 GGATTG
* * * *
3210519 ATATTTCCAATGGAGAGTTCCTAATTATAAGAACTCATTCGATAGAGGGAGAAGAAGTTCATAAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
* * * * ** * * * * *
3210584 GGGAATAACTTGTTTGACATATTGCTCTATTCATAACACCTCGAATCATCAATGCTTCACTTGAG
66 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAG
3210649 GGATTG
131 GGATTG
* * * * * *
3210655 ACATTTCCAATAGAGAGTTCATAGTGAGGAA-AGCTCATCCAACAGA-GG-G-AGAAGTTCATAA
1 ACATTTCCAATGGAGAGTTCCTAATGA-GAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAA
* * * * *
3210716 T--G-AGAACTTGTTCGACCTATTTCTATATTCACAACTCTTCGAATCAACAACGTCTCACTTGA
65 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGA
* *
3210778 TGGATTT
130 GGGATTG
* * * * * * * * * *
3210785 ACATTTCCAATAGAGAGATCCTAATGAGAATAAATCATCTGACAAAGTGAGGAGAAGTTGATAAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
* * ** *
3210850 GAGAAGAAATAT-TTCGACCTATTTCTCTATTCACAACACTTCGAATCAGCAACGCTTCACTTGA
66 GAGAAGAACT-TGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGA
*
3210914 AGGATTG
130 GGGATTG
* * * * * *
3210921 ACATTTCCAATGAAGAGTTCCTAATGAGAATAATTCATCTGAAAGAAGGAGAAGAAGTTCATAAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
* * * * * * *
3210986 GAGAAGAAATTGTTCAACCTATTGCTAGATTCATAACAGTTCAAATCATCAATGCCTCACTTGAG
66 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAG
3211051 GGATTG
131 GGATTG
* * * * * *
3211057 ACATTTCTAATGGAGAGTACCTAATGAGAAGAACTTACCCGATAGATGGAGAAGAAATTCATAAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
* * * * * ** * *
3211122 GAAAAGAAATTGCTCGACCTATTTCTAGATTCATAACACTTCGAATCAGCAATACCTCGCTTGAA
66 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAG
3211187 GGATTG
131 GGATTG
* * * *
3211193 ACATTTCCAATGGAGAGTTCCTAATGAGAATAACTCATACGGTAGAAGGAGAAGAAGTTCATAAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
* ** ** *
3211258 GAGAAGAACTTGTTCTAGTTATTGCTAGATTCACAACACTTTAAATCAGCAACGCCTCGCTTGAG
66 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAG
3211323 GGATTG
131 GGATTG
* *
3211329 ATATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACT-GTGGGAGAAGAAGTTCATAA
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGA-TAGAGGGAGAAGAAGTTCATAA
* * * *
3211393 TTAGAAGAACTTGTTCGACTTATTACTAGATTCACAACACTTCAAATCAGCAACGCCTCACTTGA
65 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGA
3211458 GGGATTG
130 GGGATTG
* * * * * * *
3211465 GCATTTCTAATTGAGAGTTCCTAATGAGAATAACTCATCCGACAGAGGTATG-AGAAGTTGATAA
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGA-GAAGAAGTTCATAA
* * ** * * * *
3211529 TGAGAAGAACTTTTTTGACCTATTGCTCTATTCACAACACTTCGAATCAGCAATGCTTCGCTCGA
65 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGA
3211594 GGGATTG
130 GGGATTG
* * * * * * *
3211601 ACATTTCTAATGGATAGTTCCTAATGAGAATAACTCTTCTGACAGAAGGAGAAGAAGTTCATAAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
* *
3211666 GAGAAGAACTTGTTCAACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTTACTTGAG
66 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAG
3211731 GGATTG
131 GGATTG
* * * * * *
3211737 ATATTTCCAATAGAGAGTTTCTAATGAGAAGAACTCATTCGATGGAGGGAGAATAAGTTCATAAA
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCAT-AA
* * * * **
3211802 T-AGAAGAACTTGTTCGACCTATTTCTAGATTCACAAAACTTCAAATCAGTAACGCCTTGCTTGA
65 TGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGA
*
3211866 GGGATTT
130 GGGATTG
* * * *
3211873 ACATTTCCAATGGAGAGTTCCTAATGAGAATACCTCATCTGATAGAGGGAGAAGAAATTCATAAT
1 ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
* * *
3211938 TAAAAGAACTTGTTCGACCTATTGCTAGATTCACAACACCTCGAATCAGCAAC
66 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAAC
3211991 ACTTGGAGGG
Statistics
Matches: 1867, Mismatches: 359, Indels: 86
0.81 0.16 0.04
Matches are distributed among these distances:
116 5 0.00
117 41 0.02
118 1 0.00
119 11 0.01
120 6 0.00
122 2 0.00
123 3 0.00
124 7 0.00
125 3 0.00
126 8 0.00
127 8 0.00
128 3 0.00
129 10 0.01
130 90 0.05
131 5 0.00
132 1 0.00
133 29 0.02
134 12 0.01
135 13 0.01
136 1594 0.85
137 15 0.01
ACGTcount: A:0.35, C:0.18, G:0.19, T:0.28
Consensus pattern (136 bp):
ACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATAAT
GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAG
GGATTG
Found at i:3209975 original size:117 final size:117
Alignment explanation
Indices: 3209766--3210001 Score: 346
Period size: 117 Copynumber: 2.0 Consensus size: 117
3209756 TCATCCAATA
**
3209766 GAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTAGATTCACAACACTTTGA
1 GAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTAGATTCACAACACTTCAA
*
3209831 ATCAACAACGCCACGCTTGAGGCATTGACATTTTCAATGGAGAGTTCCTAAT
66 ATCAACAACACCACGCTTGAGGCATTGACATTTTCAATGGAGAGTTCCTAAT
* * *
3209883 GAGGGAGAAGAATTTCATAATGAGAAGAACTTGTTTGACCTATTGCTAGATTCACAACACTTCAA
1 GAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTAGATTCACAACACTTCAA
* ** * * ** *
3209948 ATCAGCAACACCTTGCTTGAGGGATTGATATTTTCAATTTAGAGTTCTTAAT
66 ATCAACAACACCACGCTTGAGGCATTGACATTTTCAATGGAGAGTTCCTAAT
3210000 GA
1 GA
3210002 AAAGAACTCA
Statistics
Matches: 105, Mismatches: 14, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
117 105 1.00
ACGTcount: A:0.34, C:0.17, G:0.20, T:0.29
Consensus pattern (117 bp):
GAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTACTAGATTCACAACACTTCAA
ATCAACAACACCACGCTTGAGGCATTGACATTTTCAATGGAGAGTTCCTAAT
Found at i:3212087 original size:54 final size:53
Alignment explanation
Indices: 3212001--3212108 Score: 164
Period size: 54 Copynumber: 2.0 Consensus size: 53
3211991 ACTTGGAGGG
3212001 TTCCTAATGAGAAGAACTCATACGACAGAGGGAGAAGAAATTCATAATGGAGAA
1 TTCCTAATGAGAAGAACTCATACGACAGAGGGAGAAGAAATTCATAAT-GAGAA
* * *
3212055 TTCCTAATGAGAAGAACTCATCCGACTA-AGGGAGAAGAAGTTCGTAATGAGAA
1 TTCCTAATGAGAAGAACTCATACGAC-AGAGGGAGAAGAAATTCATAATGAGAA
3212108 T
1 T
3212109 ATCTTGTTTG
Statistics
Matches: 50, Mismatches: 3, Indels: 3
0.89 0.05 0.05
Matches are distributed among these distances:
53 6 0.12
54 43 0.86
55 1 0.02
ACGTcount: A:0.42, C:0.14, G:0.24, T:0.20
Consensus pattern (53 bp):
TTCCTAATGAGAAGAACTCATACGACAGAGGGAGAAGAAATTCATAATGAGAA
Found at i:3212302 original size:136 final size:136
Alignment explanation
Indices: 3212046--3213583 Score: 1406
Period size: 136 Copynumber: 11.2 Consensus size: 136
3212036 AGAAATTCAT
* * * *
3212046 AATGGAGAATTCCTAATGAGAAGAACTCATCCGACTA-AGGGAGAAGAAGTTCGTAATGAGAATA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGAC-AGAAGGAGAAGAAGTTCATAATGAGAAGA
* * * * * *
3212110 TCTTGTTTGACTTATTACTAGAGTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTGA
65 ACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCGCTTGAGGGATTGA
*
3212175 TATTTCC
130 CATTTCC
* * * * * *
3212182 AATTGAGAGTTCCTAATGAGAATAACTCATCCGACAGAATGAGGAGAAGTTGATAATGAGAATAA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAAGGAGAAGAAGTTCATAATGAGAAGAA
* ** ** * *
3212247 CTTTTTTAACCTATTGCTCTATTCATAACACTTCGAATCAGCAACGCTTCGCTTGAGGGATTGAC
66 CTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCGCTTGAGGGATTGAC
*
3212312 ATTTAC
131 ATTTCC
* * * * * **
3212318 AATGAATAGTTCTTAATGAGAATAATTCATGTGACAGAAGGAGAAGAAGTTCATAATGAGAAGAA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAAGGAGAAGAAGTTCATAATGAGAAGAA
* * ** *
3212383 CTTGTTCAACCTATTGCTAGATTCACAACACTTTGAATCAGCAACGCCTTACGTGAGGGATTGAC
66 CTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCGCTTGAGGGATTGAC
3212448 ATTTCC
131 ATTTCC
* * * * *
3212454 AATAGAGAGTTCCTAATGAGAAGAAATCATCCGATAGATGGAGAAGAAGTTCATAAGGAGAAGAA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAAGGAGAAGAAGTTCATAATGAGAAGAA
* *
3212519 CTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAACACCTCGCTTGAGGGATTGAC
66 CTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCGCTTGAGGGATTGAC
3212584 ATTTCC
131 ATTTCC
* * * * * *
3212590 AATAGAGAGTTCCTACTGAGAAGAACTCATCCGATAGAGGGAGAAGAAATTCATAATGAAAAGAA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAAGGAGAAGAAGTTCATAATGAGAAGAA
** ** * *
3212655 CTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGTGACATCTCGCTTGAAGGATTGAT
66 CTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCGCTTGAGGGATTGAC
3212720 ATTTCC
131 ATTTCC
* * * *
3212726 AATGGAGAGTTCCTAATGAGAAGATCTCATACGGCTA-AGGGAGAAGAAGTTCATAATGAGAAGA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGAC-AGAAGGAGAAGAAGTTCATAATGAGAAGA
* * * ** *
3212790 ACTTGTTCTACTTATTTCTAGATTCACAACACTTTAAATCAGCAGCGCCTCGCTTGAGGGATTGA
65 ACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCGCTTGAGGGATTGA
3212855 CATTTCC
130 CATTTCC
* * *
3212862 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACCGAGGGAGAAGAAGTTCATAATGAGAAAAA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAAGGAGAAGAAGTTCATAATGAGAAGAA
** * * * * * *
3212927 CTTGTTCGATTTATTACGACATTCACAACACTTCGAATCAGTAACCCCTCACTTGAGGGATTGAC
66 CTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCGCTTGAGGGATTGAC
3212992 ATTTCC
131 ATTTCC
* * * *
3212998 AATTGAGAGTTCCTAATGAAAAGAACTCATTCGATA-AAGGGAGAAGAAGTTCATAATGAGAAGA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAA-GGAGAAGAAGTTCATAATGAGAAGA
*** * * * ** **
3213062 AGTTCATAATGAAAAGAACTTATTTGACCT--ATT-ACTAGA-TTAATAACTCTTCGAATCAGCA
65 A---C-T--TG-TTCG-ACCTA-TTG--CTAGATTCACAACACTT-CGAA-TCAGC-AA-C-GC-
* * *** ** * *
3213123 ACAC-CTCGCTTGAGGGA-TTGGCATTTC
113 -CTCGCTTGAGGGATTGACAT----TTCC
* ** * * * * * * * *
3213150 CAATGGATAGTTCCTAAAGATAAGAACTCATCTGATAGATGGAGAAGAAGTTTATAAAGAGAAGA
1 AATGG-AGAGTTCCTAATGAGAAGAACTCATCCGACAGAAGGAGAAGAAGTTCATAATGAGAAGA
* * * * * * *
3213215 ACTTGTTCGACTTATTACTAGATTCACAACTCTTTGAATCAGCAACGTCTCGCTTAAGGAATTGA
65 ACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCGCTTGAGGGATTGA
3213280 CATTTCC
130 CATTTCC
* * ** * *
3213287 AATTGAGAGTTCCTAATGAGAAGAACTAATCTAACA-AAGGGAGGATAAGTTCATAATGAGAAGA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAA-GGAGAAGAAGTTCATAATGAGAAGA
* ** * * ** * * *
3213351 ACTTGTTCGACCTATTTCTCTAGTCACAACATTTTAAATCAGCAACACTTTGCTTGAGGGATTGA
65 ACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCGCTTGAGGGATTGA
*
3213416 CTTTTCC
130 CATTTCC
* * * *
3213423 AATGGAGAGTCCCTAATGAGAAGAACTTACCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAAGGAGAAGAAGTTCATAATGAGAAGAA
* * * * * * * *
3213488 CTTGTTCGACCTATTTCTAGATTCATAACACTTTGATTCAGCAATGCCTCACTTGAGGGACTAAC
66 CTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCGCTTGAGGGATTGAC
3213553 ATTTCC
131 ATTTCC
* * *
3213559 AATAGAGAGCTCGT-ATGAGAAGAAC
1 AATGGAGAGTTCCTAATGAGAAGAAC
3213584 CCATAGCTTG
Statistics
Matches: 1138, Mismatches: 228, Indels: 73
0.79 0.16 0.05
Matches are distributed among these distances:
135 14 0.01
136 981 0.86
137 8 0.01
139 3 0.00
140 6 0.01
141 2 0.00
142 5 0.00
143 5 0.00
144 18 0.02
145 17 0.01
146 5 0.00
147 4 0.00
148 2 0.00
149 8 0.01
150 3 0.00
152 6 0.01
153 50 0.04
154 1 0.00
ACGTcount: A:0.35, C:0.18, G:0.20, T:0.27
Consensus pattern (136 bp):
AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAAGGAGAAGAAGTTCATAATGAGAAGAA
CTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCGCTTGAGGGATTGAC
ATTTCC
Found at i:3212554 original size:272 final size:272
Alignment explanation
Indices: 3212046--3213583 Score: 1734
Period size: 272 Copynumber: 5.6 Consensus size: 272
3212036 AGAAATTCAT
* * *
3212046 AATGGAGAATTCCTAATGAGAAGAACTCATCCGACTA-AGGGAGAAGAAGTTCGTAATGAGAATA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGAC-AGAGGGAGAAGAAGTTCATAATGAGAAGA
* * * *
3212110 TCTTGTTTGACTTATTACTAGAGTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTGA
65 ACTTGTTCGACCTATTACTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTGA
* * * * * *
3212175 TATTTCCAATTGAGAGTTCCTAATGAGAATAACTCATCCGACAGAA-TGAGGAGAAGTTGATAAT
130 CATTTCCAATTGAGAGTTCCTAATGAGAAGAACTCATCCGATA-AAGGGAGAAGAAGTTCATAAT
* * ** ** * * *
3212239 GAGAATAACTTTTTTAACCTATTGCTCTATTCATAACACTTCGAATCAGCAACGCTTCGCTTGAG
194 GAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACCTCGCTTGAG
*
3212304 GGATTGACATTTAC
259 GGATTGACATTTCC
* * * * * ** *
3212318 AATGAATAGTTCTTAATGAGAATAATTCATGTGACAGAAGGAGAAGAAGTTCATAATGAGAAGAA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAA
* * * * *
3212383 CTTGTTCAACCTATTGCTAGATTCACAACACTTTGAATCAGCAACGCCTTACGTGAGGGATTGAC
66 CTTGTTCGACCTATTACTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTGAC
* * * * *
3212448 ATTTCCAATAGAGAGTTCCTAATGAGAAGAAATCATCCGATAGATGGAGAAGAAGTTCATAAGGA
131 ATTTCCAATTGAGAGTTCCTAATGAGAAGAACTCATCCGATAAAGGGAGAAGAAGTTCATAATGA
*
3212513 GAAGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAACACCTCGCTTGAGGG
196 GAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACCTCGCTTGAGGG
3212578 ATTGACATTTCC
261 ATTGACATTTCC
* * * * *
3212590 AATAGAGAGTTCCTACTGAGAAGAACTCATCCGATAGAGGGAGAAGAAATTCATAATGAAAAGAA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAA
* ** ** * * *
3212655 CTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGTGACATCTCGCTTGAAGGATTGAT
66 CTTGTTCGACCTATTACTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTGAC
* * * *
3212720 ATTTCCAATGGAGAGTTCCTAATGAGAAGATCTCATACGGCT-AAGGGAGAAGAAGTTCATAATG
131 ATTTCCAATTGAGAGTTCCTAATGAGAAGAACTCAT-CCGATAAAGGGAGAAGAAGTTCATAATG
* * * ** * *
3212784 AGAAGAACTTGTTCTACTTATTTCTAGATTCACAACACTTTAAATCAGCAGCGCCTCGCTTGAGG
195 AGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACCTCGCTTGAGG
3212849 GATTGACATTTCC
260 GATTGACATTTCC
* *
3212862 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACCGAGGGAGAAGAAGTTCATAATGAGAAAAA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAA
** * * * *
3212927 CTTGTTCGATTTATTACGACATTCACAACACTTCGAATCAGTAACCCCTCACTTGAGGGATTGAC
66 CTTGTTCGACCTATTACTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTGAC
* *
3212992 ATTTCCAATTGAGAGTTCCTAATGAAAAGAACTCATTCGATAAAGGGAGAAGAAGTTCATAATGA
131 ATTTCCAATTGAGAGTTCCTAATGAGAAGAACTCATCCGATAAAGGGAGAAGAAGTTCATAATGA
* * * * *
3213057 GAAGAAGTTCATAATGAAAAGAACTTATTTGACCTATTACTAGATTAATAACTCTTCGAATCAGC
196 GAAGAA---C-T--T-----G------TTCGACCTATTGCTAGATTCACAACACTTCGAATCAGC
*
3213122 AACACCTCGCTTGAGGGATTGGCATTTCC
244 AACACCTCGCTTGAGGGATTGACATTTCC
* * * * * * * *
3213151 AATGGATAGTTCCTAAAGATAAGAACTCATCTGATAGATGGAGAAGAAGTTTATAAAGAGAAGAA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAA
* * * * * * *
3213216 CTTGTTCGACTTATTACTAGATTCACAACTCTTTGAATCAGCAACGTCTCGCTTAAGGAATTGAC
66 CTTGTTCGACCTATTACTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTGAC
* ** * * *
3213281 ATTTCCAATTGAGAGTTCCTAATGAGAAGAACTAATCTAACAAAGGGAGGATAAGTTCATAATGA
131 ATTTCCAATTGAGAGTTCCTAATGAGAAGAACTCATCCGATAAAGGGAGAAGAAGTTCATAATGA
* ** * * ** * *
3213346 GAAGAACTTGTTCGACCTATTTCTCTAGTCACAACATTTTAAATCAGCAACACTTTGCTTGAGGG
196 GAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACCTCGCTTGAGGG
*
3213411 ATTGACTTTTCC
261 ATTGACATTTCC
* * *
3213423 AATGGAGAGTCCCTAATGAGAAGAACTTACCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAA
1 AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAA
* * * * * * *
3213488 CTTGTTCGACCTATTTCTAGATTCATAACACTTTGATTCAGCAATGCCTCACTTGAGGGACTAAC
66 CTTGTTCGACCTATTACTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTGAC
* * *
3213553 ATTTCCAATAGAGAGCTCGT-ATGAGAAGAAC
131 ATTTCCAATTGAGAGTTCCTAATGAGAAGAAC
3213584 CCATAGCTTG
Statistics
Matches: 1058, Mismatches: 187, Indels: 43
0.82 0.15 0.03
Matches are distributed among these distances:
271 15 0.01
272 805 0.76
273 3 0.00
275 1 0.00
276 1 0.00
278 2 0.00
283 2 0.00
285 1 0.00
286 1 0.00
289 227 0.21
ACGTcount: A:0.35, C:0.18, G:0.20, T:0.27
Consensus pattern (272 bp):
AATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAA
CTTGTTCGACCTATTACTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGATTGAC
ATTTCCAATTGAGAGTTCCTAATGAGAAGAACTCATCCGATAAAGGGAGAAGAAGTTCATAATGA
GAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACACCTCGCTTGAGGG
ATTGACATTTCC
Found at i:3212813 original size:408 final size:408
Alignment explanation
Indices: 3209883--3213583 Score: 2628
Period size: 408 Copynumber: 9.0 Consensus size: 408
3209873 AGTTCCTAAT
* * * *
3209883 GAGGGAGAAGAATTTCATAATGAGAAGAACTTGTTTGACCTATTGCTAGATTCACAACACTTCAA
1 GAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCGA
* * * ** * *
3209948 ATCAGCAACACCTTGCTTGAGGGATTGATATTTTCAATTTAGAGTTCTTAATGAAAAGAACTCAT
66 ATCAGCAACGCCTTGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT
* * * * *
3210013 CTGATAGAGGGAGAAGAAGTTCATAATGAGAAAAACTTGTTTGACCTATTGCAAGATTCACAACA
131 CCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACA
* * * *
3210078 CTTCGGATCAGTAATGCCTCACTTGAGGGATTGACATTTACAATAGAGAGTTCCTAATGAGAAGA
196 CTTCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGA
*
3210143 ACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTC
261 ACTCATCCGATAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTC
** * * * * *
3210208 ACAACTTTTCGAATTAGCAACACCTTGCTTAAGGGATTGACATTTCTAATGGAGAGTTCCTAATG
326 ACAACACTTCGAATCAGTAACACCTCGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG
* * *
3210273 ATAAGAACTCATCTGAAA
391 AGAAGAACTCATCGGATA
* * * *
3210291 GAGGGAGGAGAACTTCATGATGAGAAGAACTTGTTCGACCTATTAATCT--ATTCACAAAACTTC
1 GAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATT--TCTAGATTCACAACACTTC
** * * * *
3210354 GAATCAATAATG-TTTCGCGTGAGGGATCGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACT
64 GAATCAGCAACGCCTT-GCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACT
* *
3210418 CATCCGCCAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACA
128 CATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACA
* * * * * * * * *
3210483 ACACTTCAAATCAACAACGTCGCACTTGAAGGATTGATATTTCCAATGGAGAGTTCCTAATTATA
193 ACACTTCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGA
* * * * * **
3210548 AGAACTCATTCGATAGAGGGAGAAGAAGTTCATAATGGGAATAACTTGTTTGACATATTGCTCTA
258 AGAACTCATCCGATAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGA
* * ** * * * *
3210613 TTCATAACACCTCGAATCA-TCAATGCTTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCAT
323 TTCACAACACTTCGAATCAGT-AACACCTCGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCT
* * ** *
3210677 AGTGAGGAA-AGCTCATCCAACA
387 AATGA-GAAGAACTCATCGGATA
* *
3210699 GA-GG-G-AGAAGTTCATAAT--G-AGAACTTGTTCGACCTATTTCTATATTCACAACTCTTCGA
1 GAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCGA
* * ** * * * * * *
3210758 ATCAACAACGTCTCACTTGATGGATTTACATTTCCAATAGAGAGATCCTAATGAGAATAAATCAT
66 ATCAGCAACGCCTTGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT
* * * * * * * **
3210823 CTGACAAAGTGAGGAGAAGTTGATAATGAGAAGAAATAT-TTCGACCTATTTCTCTATTCACAAC
131 CCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACT-TGTTCGACCTATTGCTAGATTCACAAC
* *
3210887 ACTTCGAATCAGCAACGCTTCACTTGAAGGATTGACATTTCCAAT-GAAGAGTTCCTAATGAGAA
195 ACTTCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAG-AGAGTTCCTAATGAGAA
* * * * * * *
3210951 TAATTCATCTGAAAGAAGGAGAAGAAGTTCATAATGAGAAGAAATTGTTCAACCTATTGCTAGAT
259 GAACTCATCCGATAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGAT
* * * ** * * *
3211016 TCATAACAGTTCAAATCA-TCAATGCCTCACTTGAGGGATTGACATTTCTAATGGAGAGTACCTA
324 TCACAACACTTCGAATCAGT-AACACCTCGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTA
* * *
3211080 ATGAGAAGAACTTACCCGATA
388 ATGAGAAGAACTCATCGGATA
* * * * * *
3211101 GATGGAGAAGAAATTCATAATGAAAAGAAATTGCTCGACCTATTTCTAGATTCATAACACTTCGA
1 GAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCGA
** * * *
3211166 ATCAGCAATACCTCGCTTGAAGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAATAACTCAT
66 ATCAGCAACGCCTTGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT
* ** * * **
3211231 ACGGTAGAAGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCTAGTTATTGCTAGATTCACAACA
131 CCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACA
** * * *
3211296 CTTTAAATCAGCAACGCCTCGCTTGAGGGATTGATATTTCCAATGGAGAGTTCCTAATGAGAAGA
196 CTTCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGA
* * * *
3211361 ACTCATCCGACT-GTGGGAGAAGAAGTTCATAATTAGAAGAACTTGTTCGACTTATTACTAGATT
261 ACTCATCCGA-TAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATT
* * * * * * *
3211425 CACAACACTTCAAATCAGCAACGCCTCACTTGAGGGATTGGCATTTCTAATTGAGAGTTCCTAAT
325 CACAACACTTCGAATCAGTAACACCTCGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAAT
* * *
3211490 GAGAATAACTCATCCGACA
390 GAGAAGAACTCATCGGATA
* * * * * **
3211509 GAGGTATG-AGAAGTTGATAATGAGAAGAACTTTTTTGACCTATTGCTCTATTCACAACACTTCG
1 GAGGGA-GAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCG
* * * * *
3211573 AATCAGCAATG-CTTCGCTCGAGGGATTGACATTTCTAATGGATAGTTCCTAATGAGAATAACTC
65 AATCAGCAACGCCTT-GCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTC
* * * *
3211637 TTCTGACAGAAGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCAACCTATTGCTAGATTCACAA
129 ATCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAA
* * *
3211702 CACTTCGAATCAGCAACGCCTTACTTGAGGGATTGATATTTCCAATAGAGAGTTTCTAATGAGAA
194 CACTTCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGAA
* * * *
3211767 GAACTCATTCGATGGAGGGAGAATAAGTTCATAAAT-AGAAGAACTTGTTCGACCTATTTCTAGA
259 GAACTCATCCGATAGAGGGAGAAGAAGTTCAT-AATGAGAAGAACTTGTTCGACCTATTGCTAGA
* * * * *
3211831 TTCACAAAACTTCAAATCAGTAACGCCTTGCTTGAGGGATTTACATTTCCAATGGAGAGTTCCTA
323 TTCACAACACTTCGAATCAGTAACACCTCGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTA
* * *
3211896 ATGAGAATACCTCATCTGATA
388 ATGAGAAGAACTCATCGGATA
* * * * *
3211917 GAGGGAGAAGAAATTCATAATTAAAAGAACTTGTTCGACCTATTGCTAGATTCACAACACCTCGA
1 GAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCGA
*
3211982 ATCAGCAA-------C-----------AC---T----TGGAGGGTTCCTAATGAGAAGAACTCAT
66 ATCAGCAACGCCTTGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT
* * *** *** * * **
3212022 ACGACAGAGGGAGAAGAAATTCATAATGGAGAATTCCTAATGAGAAGAACTCATCCGACTA-AGG
131 CCGACAGAGGGAGAAGAAGTTCATAAT-GAGAAGAACT--TG-TTCGACCT-AT-TG-CTAGATT
* * * * * *** *** *** ** * * *
3212086 GAGAAGAAGTTCGTAATGAG-AATATCTTGTTTGACTTATT-ACTAGAGT-C-ACA-ACACTT-C
189 CACAA-CACTTCG-AATCAGCAACGCCTCACTTGAGGGATTGAC-A-TTTCCAATAGAGAGTTCC
* * * * ** ** * * *
3212145 GAATCAGCAACG-CCTCA-CTTGAGGGATTGATATTTCCAATTGAGAGTTCCTAATGAGAATAAC
250 TAATGAG-AA-GAACTCATC-CGATAGA--GGGA----GAA--GA-AGTTCATAATGAGAAGAAC
** * ** * ** * * ** ** * *
3212208 TCATCCGACAGAATGAGGAGAAGTTGA-TA-A-TGAGAATAACTTTTTTAAC-CTATTGCTCT-A
303 TTGTTCGACCTATTG-CTAG-A-TTCACAACACTTCGAAT--C---AGTAACAC-CTCGCT-TGA
*** * * * * * * *
3212268 TTCA-TAACACTTCGAAT-CAGCAACGCTTCGCT--TGAGGGATTGACATTTACAAT-GAATA
358 GGGATTGACATTTCCAATGGAG--A-G-TTC-CTAATGA--GA-AGA-A-CT-C-ATCGGATA
** * * *** ****
3212326 GTTCTTAATGAGAATAA-TTCATGTGACA-GAAGGAGAAGAAGTTC-A--TAATGAGAAGAACTT
1 G-----AGGGAGAAGAAGTTCA--T-A-ATG-AGAAGAACTTGTTCGACCT-ATTTCTAG-A-TT
** * * * *
3212386 GTTCAAC-CTATTGCTAGATTCACAACACTTTGAATCAGCAACGCCTTACGTGAGGGATTGACAT
53 -CACAACAC--TT-C--GAAT--C-AG------------CAACGCCTTGCTTGAGGGATTGACAT
* * * * *
3212450 TTCCAATAGAGAGTTCCTAATGAGAAGAAATCATCCGATAGATGGAGAAGAAGTTCATAAGGAGA
97 TTCCAATGGAGAGTTCCTAATGAGAAGAACTCATCCGACAGAGGGAGAAGAAGTTCATAATGAGA
* * *
3212515 AGAACTTGTTCGACCTATTGCTAGATTCACAAAACTTCGAATCAGCAACACCTCGCTTGAGGGAT
162 AGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGCAACGCCTCACTTGAGGGAT
* *
3212580 TGACATTTCCAATAGAGAGTTCCTACTGAGAAGAACTCATCCGATAGAGGGAGAAGAAATTCATA
227 TGACATTTCCAATAGAGAGTTCCTAATGAGAAGAACTCATCCGATAGAGGGAGAAGAAGTTCATA
* * *
3212645 ATGAAAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGTGACATCTCGCTTG
292 ATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACACTTCGAATCAGTAACACCTCGCTTG
* * * *
3212710 AAGGATTGATATTTCCAATGGAGAGTTCCTAATGAGAAGATCTCATACGGCTA
357 AGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT-CGGATA
* * **
3212763 -AGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCTACTTATTTCTAGATTCACAACACTTTAA
1 GAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCGA
* *
3212827 ATCAGCAGCGCCTCGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT
66 ATCAGCAACGCCTTGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT
* * ** * * *
3212892 CCGACCGAGGGAGAAGAAGTTCATAATGAGAAAAACTTGTTCGATTTATTACGACATTCACAACA
131 CCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACA
* * * *
3212957 CTTCGAATCAGTAACCCCTCACTTGAGGGATTGACATTTCCAATTGAGAGTTCCTAATGAAAAGA
196 CTTCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGA
* * *
3213022 ACTCATTCGATAAAGGGAGAAGAAGTTCATAATGAGAAGAAGTTCATAATGAAAAGAACTTATTT
261 ACTCATCCGATAGAGGGAGAAGAAGTTCATAATGAGAAGAA---C-T--T-----G------TTC
* * * * * *
3213087 GACCTATTACTAGATTAATAACTCTTCGAATCAGCAACACCTCGCTTGAGGGATTGGCATTTCCA
309 GACCTATTGCTAGATTCACAACACTTCGAATCAGTAACACCTCGCTTGAGGGATTGACATTTCCA
* * * *
3213152 ATGGATAGTTCCTAAAGATAAGAACTCATCTGATA
374 ATGGAGAGTTCCTAATGAGAAGAACTCATCGGATA
* * * * * * *
3213187 GATGGAGAAGAAGTTTATAAAGAGAAGAACTTGTTCGACTTATTACTAGATTCACAACTCTTTGA
1 GAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCGA
* * * * * *
3213252 ATCAGCAACGTCTCGCTTAAGGAATTGACATTTCCAATTGAGAGTTCCTAATGAGAAGAACTAAT
66 ATCAGCAACGCCTTGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT
** * * * * ** *
3213317 CTAACAAAGGGAGGATAAGTTCATAATGAGAAGAACTTGTTCGACCTATTTCTCTAGTCACAACA
131 CCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACA
* ** * * ** * * *
3213382 TTTTAAATCAGCAACACTTTGCTTGAGGGATTGACTTTTCCAATGGAGAGTCCCTAATGAGAAGA
196 CTTCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGA
* * * *
3213447 ACTTACCCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTC
261 ACTCATCCGATAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTC
* * * * ** * * * * * *
3213512 ATAACACTTTGATTCAGCAATGCCTCACTTGAGGGACTAACATTTCCAATAGAGAGCTCGT-ATG
326 ACAACACTTCGAATCAGTAACACCTCGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG
3213576 AGAAGAAC
391 AGAAGAAC
3213584 CCATAGCTTG
Statistics
Matches: 2567, Mismatches: 551, Indels: 351
0.74 0.16 0.10
Matches are distributed among these distances:
383 47 0.02
384 7 0.00
386 2 0.00
387 10 0.00
388 17 0.01
389 9 0.00
390 26 0.01
391 6 0.00
394 2 0.00
396 4 0.00
397 25 0.01
398 3 0.00
399 3 0.00
400 8 0.00
401 16 0.01
402 322 0.13
403 10 0.00
404 4 0.00
405 27 0.01
406 2 0.00
407 18 0.01
408 1327 0.52
409 12 0.00
410 4 0.00
411 1 0.00
412 1 0.00
413 4 0.00
414 11 0.00
415 5 0.00
416 3 0.00
417 13 0.01
418 4 0.00
419 3 0.00
420 2 0.00
421 2 0.00
422 4 0.00
423 2 0.00
424 5 0.00
425 339 0.13
426 2 0.00
427 4 0.00
428 14 0.01
429 4 0.00
430 5 0.00
431 9 0.00
432 4 0.00
435 2 0.00
436 1 0.00
437 7 0.00
439 2 0.00
440 4 0.00
441 3 0.00
442 5 0.00
443 10 0.00
444 10 0.00
445 5 0.00
446 3 0.00
447 3 0.00
448 29 0.01
449 2 0.00
451 2 0.00
454 6 0.00
455 28 0.01
456 10 0.00
457 16 0.01
458 11 0.00
459 2 0.00
461 7 0.00
462 47 0.02
ACGTcount: A:0.35, C:0.18, G:0.20, T:0.28
Consensus pattern (408 bp):
GAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTTCTAGATTCACAACACTTCGA
ATCAGCAACGCCTTGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATGAGAAGAACTCAT
CCGACAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTCACAACA
CTTCGAATCAGCAACGCCTCACTTGAGGGATTGACATTTCCAATAGAGAGTTCCTAATGAGAAGA
ACTCATCCGATAGAGGGAGAAGAAGTTCATAATGAGAAGAACTTGTTCGACCTATTGCTAGATTC
ACAACACTTCGAATCAGTAACACCTCGCTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAATG
AGAAGAACTCATCGGATA
Found at i:3213079 original size:20 final size:17
Alignment explanation
Indices: 3213038--3213079 Score: 75
Period size: 17 Copynumber: 2.5 Consensus size: 17
3213028 TCGATAAAGG
3213038 GAGAAGAAGTTCATAAT
1 GAGAAGAAGTTCATAAT
3213055 GAGAAGAAGTTCATAAT
1 GAGAAGAAGTTCATAAT
*
3213072 GAAAAGAA
1 GAGAAGAA
3213080 CTTATTTGAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
17 24 1.00
ACGTcount: A:0.52, C:0.05, G:0.24, T:0.19
Consensus pattern (17 bp):
GAGAAGAAGTTCATAAT
Found at i:3213180 original size:153 final size:153
Alignment explanation
Indices: 3212902--3213215 Score: 407
Period size: 153 Copynumber: 2.1 Consensus size: 153
3212892 CCGACCGAGG
* ** *
3212902 GAGAAGAAGTTCATAATGAGAAAAACTTGTTCGATTTATTACGACATTCACAACACTTCGAATCA
1 GAGAAGAAGTTCATAATGAGAAAAACTTATTCGACCTATTACGACATTAACAACACTTCGAATCA
* * * *
3212967 GTAACCCCTCACTTGAGGGATTGACATTTCCAATTGAGAGTTCCTAATGAAAAGAACTCAT-TCG
66 GCAACACCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAAAGAAAAGAACTCATCT-G
*
3213031 ATAAAGGGAGAAGAAGTTCATAAT
130 ATAAAGGGAGAAGAAGTTCATAAA
* * * * *
3213055 GAGAAGAAGTTCATAATGA-AAAGAACTTATTTGACCTATTACTAGATTAATAACTCTTCGAATC
1 GAGAAGAAGTTCATAATGAGAAA-AACTTATTCGACCTATTACGACATTAACAACACTTCGAATC
* * * *
3213119 AGCAACACCTCGCTTGAGGGATTGGCATTTCCAATGGATAGTTCCTAAAGATAAGAACTCATCTG
65 AGCAACACCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAAAGAAAAGAACTCATCTG
* * *
3213184 ATAGATGGAGAAGAAGTTTATAAA
130 ATAAAGGGAGAAGAAGTTCATAAA
3213208 GAGAAGAA
1 GAGAAGAA
3213216 CTTGTTCGAC
Statistics
Matches: 138, Mismatches: 21, Indels: 4
0.85 0.13 0.02
Matches are distributed among these distances:
152 3 0.02
153 134 0.97
154 1 0.01
ACGTcount: A:0.39, C:0.16, G:0.19, T:0.27
Consensus pattern (153 bp):
GAGAAGAAGTTCATAATGAGAAAAACTTATTCGACCTATTACGACATTAACAACACTTCGAATCA
GCAACACCTCACTTGAGGGATTGACATTTCCAATGGAGAGTTCCTAAAGAAAAGAACTCATCTGA
TAAAGGGAGAAGAAGTTCATAAA
Found at i:3213741 original size:18 final size:17
Alignment explanation
Indices: 3213702--3213745 Score: 54
Period size: 17 Copynumber: 2.5 Consensus size: 17
3213692 ACCAGACCCA
*
3213702 AAAACCCAAAATCAAAT
1 AAAACCCAAAAACAAAT
3213719 AAAACCCAAAACACAACAT
1 AAAACCCAAAA-ACAA-AT
3213738 -AAACCCAA
1 AAAACCCAA
3213746 CCAGACCCGA
Statistics
Matches: 24, Mismatches: 1, Indels: 3
0.86 0.04 0.11
Matches are distributed among these distances:
17 11 0.46
18 11 0.46
19 2 0.08
ACGTcount: A:0.64, C:0.30, G:0.00, T:0.07
Consensus pattern (17 bp):
AAAACCCAAAAACAAAT
Found at i:3213845 original size:27 final size:27
Alignment explanation
Indices: 3213815--3213867 Score: 97
Period size: 27 Copynumber: 2.0 Consensus size: 27
3213805 AGCCGCCCAC
*
3213815 TTCCCCCAACCAGCAATCACCTTCTTT
1 TTCCCCCAACCAACAATCACCTTCTTT
3213842 TTCCCCCAACCAACAATCACCTTCTT
1 TTCCCCCAACCAACAATCACCTTCTT
3213868 CTGCCCCAAT
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
27 25 1.00
ACGTcount: A:0.25, C:0.45, G:0.02, T:0.28
Consensus pattern (27 bp):
TTCCCCCAACCAACAATCACCTTCTTT
Found at i:3213874 original size:27 final size:27
Alignment explanation
Indices: 3213817--3213874 Score: 89
Period size: 27 Copynumber: 2.1 Consensus size: 27
3213807 CCGCCCACTT
* * *
3213817 CCCCCAACCAGCAATCACCTTCTTTTT
1 CCCCCAACCAACAATCACCTTCTTCTG
3213844 CCCCCAACCAACAATCACCTTCTTCTG
1 CCCCCAACCAACAATCACCTTCTTCTG
3213871 CCCC
1 CCCC
3213875 AATCAATTGT
Statistics
Matches: 28, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
27 28 1.00
ACGTcount: A:0.22, C:0.50, G:0.03, T:0.24
Consensus pattern (27 bp):
CCCCCAACCAACAATCACCTTCTTCTG
Found at i:3215479 original size:174 final size:178
Alignment explanation
Indices: 3215185--3215540 Score: 587
Period size: 176 Copynumber: 2.0 Consensus size: 178
3215175 TTTACTTTAC
* * *
3215185 TTAATTACCATTTATTTTTTTAATATTTTCCAAATATGTTCTCAATTTCATAAAATTAGATATAT
1 TTAATTACCATTTATTATTTTAATAATTTCCAAATATGTTCTCAATTACATAAAATTAGATATAT
3215250 ATATATTCAAACCTTTTATTTTCCTTTAATTTTGTCGTTTGCTTCCTTCGACTATAT-C-TTTTT
66 ATATATTCAAACCTTTTATTTTCCTTTAATTTTGTCGTTTGCTTCCTTCGACTATATCCTTTTTT
3215313 TTCTTTACTTAAATTTCCTTTTAAAGCATGTTGATTTACTACCCTTTG
131 TTCTTTACTTAAATTTCCTTTTAAAGCATGTTGATTTACTACCCTTTG
* * *
3215361 TTAATTACCATTTATTATTTTAATAATTTCCAAATCTGTTGTCAATTACATAAAATTAGCTATAT
1 TTAATTACCATTTATTATTTTAATAATTTCCAAATATGTTCTCAATTACATAAAATTAGATATAT
*
3215426 -T-TATT-ATAACCTTTTATTTTCCTTTAATTTTGTCGTTTGCTTCCTTTGACTATATCCTTTTT
66 ATATATTCA-AACCTTTTATTTTCCTTTAATTTTGTCGTTTGCTTCCTTCGACTATATCC--TTT
3215488 TTTTTCTTTACTTAAATTTCCTTTTAAAGCATGTTGATTTACTACCCTTTG
128 TTTTTCTTTACTTAAATTTCCTTTTAAAGCATGTTGATTTACTACCCTTTG
3215539 TT
1 TT
3215541 TCTTTCATAT
Statistics
Matches: 168, Mismatches: 7, Indels: 8
0.92 0.04 0.04
Matches are distributed among these distances:
173 1 0.01
174 51 0.30
175 2 0.01
176 59 0.35
178 55 0.33
ACGTcount: A:0.26, C:0.16, G:0.06, T:0.53
Consensus pattern (178 bp):
TTAATTACCATTTATTATTTTAATAATTTCCAAATATGTTCTCAATTACATAAAATTAGATATAT
ATATATTCAAACCTTTTATTTTCCTTTAATTTTGTCGTTTGCTTCCTTCGACTATATCCTTTTTT
TTCTTTACTTAAATTTCCTTTTAAAGCATGTTGATTTACTACCCTTTG
Found at i:3220621 original size:24 final size:25
Alignment explanation
Indices: 3220576--3220622 Score: 62
Period size: 24 Copynumber: 1.9 Consensus size: 25
3220566 ATTTGAATTT
*
3220576 TAATTTAATTTAAAAATTTATGATA
1 TAATTTAATTTAAAAATATATGATA
3220601 TAATTT-ATTTAATAAA-ATATGA
1 TAATTTAATTTAA-AAATATATGA
3220623 AATTAGAAGA
Statistics
Matches: 20, Mismatches: 1, Indels: 3
0.83 0.04 0.12
Matches are distributed among these distances:
24 11 0.55
25 9 0.45
ACGTcount: A:0.49, C:0.00, G:0.04, T:0.47
Consensus pattern (25 bp):
TAATTTAATTTAAAAATATATGATA
Found at i:3221241 original size:13 final size:13
Alignment explanation
Indices: 3221211--3221241 Score: 53
Period size: 13 Copynumber: 2.4 Consensus size: 13
3221201 TTAAAAAAAT
*
3221211 AAAAATTTTATCA
1 AAAAATTTTATAA
3221224 AAAAATTTTATAA
1 AAAAATTTTATAA
3221237 AAAAA
1 AAAAA
3221242 CCTAAAAATC
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
13 17 1.00
ACGTcount: A:0.65, C:0.03, G:0.00, T:0.32
Consensus pattern (13 bp):
AAAAATTTTATAA
Found at i:3226897 original size:2 final size:2
Alignment explanation
Indices: 3226890--3226952 Score: 119
Period size: 2 Copynumber: 32.0 Consensus size: 2
3226880 GTACCCAACA
3226890 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
3226932 AT AT AT AT AT AT AT AT A- AT AT
1 AT AT AT AT AT AT AT AT AT AT AT
3226953 GTGTATACAA
Statistics
Matches: 60, Mismatches: 0, Indels: 2
0.97 0.00 0.03
Matches are distributed among these distances:
1 1 0.02
2 59 0.98
ACGTcount: A:0.51, C:0.00, G:0.00, T:0.49
Consensus pattern (2 bp):
AT
Found at i:3229804 original size:42 final size:41
Alignment explanation
Indices: 3229753--3229833 Score: 108
Period size: 42 Copynumber: 2.0 Consensus size: 41
3229743 TCCTTCGAGC
* * *
3229753 CATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGTT
1 CATCAGTAAGTCTTTAGAGCACGATG-ATAAATCCTTCGGTT
* *
3229795 CATCTGTAAGTCTTTAGAGCACGATGATAAGTCCTTCGG
1 CATCAGTAAGTCTTTAGAGCACGATGATAAATCCTTCGG
3229834 GCCATCCATA
Statistics
Matches: 34, Mismatches: 5, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
41 11 0.32
42 23 0.68
ACGTcount: A:0.25, C:0.21, G:0.21, T:0.33
Consensus pattern (41 bp):
CATCAGTAAGTCTTTAGAGCACGATGATAAATCCTTCGGTT
Found at i:3229877 original size:428 final size:431
Alignment explanation
Indices: 3228985--3230081 Score: 1828
Period size: 428 Copynumber: 2.5 Consensus size: 431
3228975 GCAAATCCAA
* *
3228985 ACCTTCGGGTAAGATGTTTTCAAATGAATTTTAAAAATG-AAAAAATGATGTTTTAAGAAGATGG
1 ACCTTCGGGTAGGATGTTTTCAAATGAA-TTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGG
* *
3229049 AATTTTTGAAAACGAAAAATGTGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAG
65 AATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAG
*
3229114 TAAGTCTTTCGAGCATGATGCTTAAATCCTTCGAGTCATCTGTAAGCCTTTAGAGCAAGATGATA
130 TAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATA
* * * *
3229179 AGCCCTTTGGGCCATCCATAAGACCTTCAGGTAGGGTGTTTTCAAATGAATTTGAAAATGAAAAA
195 AGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCAAATGAATTT--AAATGAAAAA
3229244 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
258 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
*
3229309 TATAAGTCCTTCGGCCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCTTTCGGGTCATCTAT
323 TATAAGTCCTTCGGCCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTAT
3229374 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAG
388 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAG
3229418 ACCTTCGGGTAGGATGTTTTCAAATGAATTTGAAAATGAAAAAAATGATG-TTTAAGAAGATGGA
1 ACCTTCGGGTAGGATGTTTTCAAATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGGA
*
3229482 ATTTTTGAAAACGAAGATTGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGT
66 ATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGT
* * *
3229547 AAGTCTTTCGAGCATGATGCTTAAATCTTTTGGGTCATCTGTAAGCCTTTAGAGTAAGATGATAA
131 AAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAA
3229612 GTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCAAATGAATTT-AATG-AAAAAAA
196 GTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCAAATGAATTTAAATGAAAAAAAA
3229675 TGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTAT
261 TGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTAT
* *
3229740 AAGTCCTTCGAG-CCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGTTCATCTGTAA
326 AAGTCCTTCG-GCCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTATAA
* *
3229804 GTCTTTAGAGCACGATGATAAGTCCTTCGGGCCATCCATAAG
390 GCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAG
*
3229846 ACTTTCGGGTAGGATGTTTTCACAA-GAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGG
1 ACCTTCGGGTAGGATGTTTTCA-AATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGG
* * * ** *
3229910 AATTTTTGAAAACAAAGAATGCGATTTTCAAAATTTCACGATTTGTAAGTTTTTCAGGCCATCAG
65 AATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAG
* * * *
3229975 AAAGTCTTTCGAGCATGGTGCTTAAATCCTTCGGGTCATCCGTAAGCCTTTAGAGCAGGATGATA
130 TAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATA
* *
3230040 AGTCCTTCAGGCCATCCATAAGACCTTCGGGCAGGATGTTTT
195 AGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTT
3230082 TCACCAGGAT
Statistics
Matches: 625, Mismatches: 35, Indels: 12
0.93 0.05 0.02
Matches are distributed among these distances:
428 217 0.35
429 176 0.28
432 194 0.31
433 38 0.06
ACGTcount: A:0.33, C:0.15, G:0.20, T:0.32
Consensus pattern (431 bp):
ACCTTCGGGTAGGATGTTTTCAAATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGGA
ATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGT
AAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAA
GTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCAAATGAATTTAAATGAAAAAAAA
TGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTAT
AAGTCCTTCGGCCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTATAAG
CCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAG
Found at i:3229999 original size:216 final size:215
Alignment explanation
Indices: 3228985--3230081 Score: 1810
Period size: 216 Copynumber: 5.1 Consensus size: 215
3228975 GCAAATCCAA
* *
3228985 ACCTTCGGGTAAGATGTTTTCAAATGAATTTTAAAAATG-AAAAAATGATGTTTTAAGAAGATGG
1 ACCTTCGGGTAGGATGTTTTCAAATGAA-TTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGG
* *
3229049 AATTTTTGAAAACGAAAAATGTGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAG
65 AATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTC-GGCCATCAG
*
3229114 TAAGTCTTTCGAGCATGATGCTTAAATCCTTCGAGTCATCTGTAAGCCTTTAGAGCAAGATGATA
129 TAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATA
* *
3229179 AGCCCTTTGGGCCATCCATAAG
194 AGTCCTTCGGGCCATCCATAAG
* *
3229201 ACCTTCAGGTAGGGTGTTTTCAAATGAATTTGAAAATGAAAAAAAATGATGTTTTAAGAAGATGG
1 ACCTTCGGGTAGGATGTTTTCAAATGAATTTGAAAATG-AAAAAAATGATGTTTTAAGAAGATGG
3229266 AATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGCCCATCAG
65 AATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGG-CCATCAG
* *
3229331 TAAGTCTTTCGAGCATGATGCTTAAATCTTTCGGGTCATCTATAAGCCTTTAGAGCAAGATGATA
129 TAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATA
3229396 AGTCCTTCGGGCCATCCATAAG
194 AGTCCTTCGGGCCATCCATAAG
3229418 ACCTTCGGGTAGGATGTTTTCAAATGAATTTGAAAATGAAAAAAATGATG-TTTAAGAAGATGGA
1 ACCTTCGGGTAGGATGTTTTCAAATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGGA
*
3229482 ATTTTTGAAAACGAAGATTGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGT
66 ATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTC-GGCCATCAGT
* * *
3229547 AAGTCTTTCGAGCATGATGCTTAAATCTTTTGGGTCATCTGTAAGCCTTTAGAGTAAGATGATAA
130 AAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAA
3229612 GTCCTTCGGGCCATCCATAAG
195 GTCCTTCGGGCCATCCATAAG
3229633 ACCTTCGGGTAGGATGTTTTCAAATGAATTT---AATGAAAAAAATGATGTTTTAAGAAGATGGA
1 ACCTTCGGGTAGGATGTTTTCAAATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGGA
3229695 ATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGAGCCATCAGT
66 ATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCG-GCCATCAGT
* * *
3229760 AAGTCTTTCGAGCATGATGCTTAAATCCTTCGGTTCATCTGTAAGTCTTTAGAGCACGATGATAA
130 AAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAA
3229825 GTCCTTCGGGCCATCCATAAG
195 GTCCTTCGGGCCATCCATAAG
*
3229846 ACTTTCGGGTAGGATGTTTTCACAA-GAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGG
1 ACCTTCGGGTAGGATGTTTTCA-AATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGG
* * * **
3229910 AATTTTTGAAAACAAAGAATGCGATTTTCAAAATTTCACGATTTGTAAGTTTTTCAGGCCATCAG
65 AATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTC-GGCCATCAG
* * * *
3229975 AAAGTCTTTCGAGCATGGTGCTTAAATCCTTCGGGTCATCCGTAAGCCTTTAGAGCAGGATGATA
129 TAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATA
*
3230040 AGTCCTTCAGGCCATCCATAAG
194 AGTCCTTCGGGCCATCCATAAG
*
3230062 ACCTTCGGGCAGGATGTTTT
1 ACCTTCGGGTAGGATGTTTT
3230082 TCACCAGGAT
Statistics
Matches: 831, Mismatches: 39, Indels: 22
0.93 0.04 0.02
Matches are distributed among these distances:
212 17 0.02
213 183 0.22
214 2 0.00
215 198 0.24
216 227 0.27
217 204 0.25
ACGTcount: A:0.33, C:0.15, G:0.20, T:0.32
Consensus pattern (215 bp):
ACCTTCGGGTAGGATGTTTTCAAATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGGA
ATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGCCATCAGTA
AGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAG
TCCTTCGGGCCATCCATAAG
Found at i:3234585 original size:24 final size:25
Alignment explanation
Indices: 3234540--3234586 Score: 62
Period size: 24 Copynumber: 1.9 Consensus size: 25
3234530 ATTTGAATTT
*
3234540 TAATTTAATTTAAAAATTTATGATA
1 TAATTTAATTTAAAAATATATGATA
3234565 TAATTT-ATTTAATAAA-ATATGA
1 TAATTTAATTTAA-AAATATATGA
3234587 AATTAGAAGA
Statistics
Matches: 20, Mismatches: 1, Indels: 3
0.83 0.04 0.12
Matches are distributed among these distances:
24 11 0.55
25 9 0.45
ACGTcount: A:0.49, C:0.00, G:0.04, T:0.47
Consensus pattern (25 bp):
TAATTTAATTTAAAAATATATGATA
Found at i:3236899 original size:42 final size:42
Alignment explanation
Indices: 3236762--3236987 Score: 183
Period size: 42 Copynumber: 5.4 Consensus size: 42
3236752 GTTTAAACTC
* * *
3236762 ATAAAAGTAAAAGGT-ATGATTGAAAAAATTAGAGAACTCAATT
1 ATAAAGGTAAAAAGTGA-GATTGAAAAAATTAG-GGACTCAATT
* * * **
3236805 ATAAAGGTAAAAAGTGACACT-AAAAAATTAGGTGCCTTGATT
1 ATAAAGGTAAAAAGTGAGATTGAAAAAATTAGG-GACTCAATT
* *
3236847 TTAAAGGTAAAAAGT-AGATTGAAAAAATTAGGGAACTAAATT
1 ATAAAGGTAAAAAGTGAGATTGAAAAAATTAGGG-ACTCAATT
* * * * *
3236889 ATATATGTAAAAAATGGGATTGAAAAAATTAGGGGCTCAATT
1 ATAAAGGTAAAAAGTGAGATTGAAAAAATTAGGGACTCAATT
** * *
3236931 ATAAAACTAAAAAGTGAGATTG-AAAAA-TAAGGAGCTTAATT
1 ATAAAGGTAAAAAGTGAGATTGAAAAAATTAGGGA-CTCAATT
* *
3236972 ATAAATGTATAAAGTG
1 ATAAAGGTAAAAAGTG
3236988 GGATCATCAA
Statistics
Matches: 145, Mismatches: 32, Indels: 14
0.76 0.17 0.07
Matches are distributed among these distances:
40 4 0.03
41 29 0.20
42 79 0.54
43 32 0.22
44 1 0.01
ACGTcount: A:0.50, C:0.05, G:0.19, T:0.27
Consensus pattern (42 bp):
ATAAAGGTAAAAAGTGAGATTGAAAAAATTAGGGACTCAATT
Found at i:3236915 original size:84 final size:84
Alignment explanation
Indices: 3236762--3236991 Score: 232
Period size: 84 Copynumber: 2.7 Consensus size: 84
3236752 GTTTAAACTC
* * * * ** *
3236762 ATAAAAGTAAAAGGTATGATTGAAAAAATTAGAGAACTCAATTATAAAGGTAAAAAGTGACACT-
1 ATAAAAGTAAAAAGTA-GATTGAAAAAATTAGGGAACTAAATTATAAATGTAAAAAGTGGGATTA
**
3236826 AAAAAATTAGGTGCCTTGATT
65 AAAAAATTAGG-GCCTCAATT
* * * * *
3236847 TTAAAGGTAAAAAGTAGATTGAAAAAATTAGGGAACTAAATTATATATGTAAAAAATGGGATTGA
1 ATAAAAGTAAAAAGTAGATTGAAAAAATTAGGGAACTAAATTATAAATGTAAAAAGTGGGATTAA
*
3236912 AAAAATTAGGGGCTCAATT
66 AAAAATTAGGGCCTCAATT
* * * * *
3236931 ATAAAACTAAAAAGTGAGATTG-AAAAA-TAAGGAGCTTAATTATAAATGTATAAAGTGGGAT
1 ATAAAAGTAAAAAGT-AGATTGAAAAAATTAGGGAACTAAATTATAAATGTAAAAAGTGGGAT
3236992 CATCAATTAT
Statistics
Matches: 120, Mismatches: 23, Indels: 6
0.81 0.15 0.04
Matches are distributed among these distances:
83 28 0.23
84 62 0.52
85 30 0.25
ACGTcount: A:0.50, C:0.05, G:0.19, T:0.27
Consensus pattern (84 bp):
ATAAAAGTAAAAAGTAGATTGAAAAAATTAGGGAACTAAATTATAAATGTAAAAAGTGGGATTAA
AAAAATTAGGGCCTCAATT
Found at i:3239737 original size:7 final size:7
Alignment explanation
Indices: 3239725--3239752 Score: 56
Period size: 7 Copynumber: 4.0 Consensus size: 7
3239715 TGGGGTGGAA
3239725 CCACACT
1 CCACACT
3239732 CCACACT
1 CCACACT
3239739 CCACACT
1 CCACACT
3239746 CCACACT
1 CCACACT
3239753 ATGTAGCGGG
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
7 21 1.00
ACGTcount: A:0.29, C:0.57, G:0.00, T:0.14
Consensus pattern (7 bp):
CCACACT
Found at i:3248360 original size:16 final size:16
Alignment explanation
Indices: 3248339--3248379 Score: 73
Period size: 16 Copynumber: 2.6 Consensus size: 16
3248329 AACTTCCTAC
3248339 GTGGATCCATGAAACA
1 GTGGATCCATGAAACA
*
3248355 GTGGATCCATGACACA
1 GTGGATCCATGAAACA
3248371 GTGGATCCA
1 GTGGATCCA
3248380 ATGGGTGATC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
16 24 1.00
ACGTcount: A:0.32, C:0.22, G:0.27, T:0.20
Consensus pattern (16 bp):
GTGGATCCATGAAACA
Found at i:3253310 original size:15 final size:15
Alignment explanation
Indices: 3253290--3253340 Score: 84
Period size: 15 Copynumber: 3.4 Consensus size: 15
3253280 ATATTTAACT
*
3253290 GGGCGGGCGGATGTG
1 GGGCGGGCGGATGCG
3253305 GGGCGGGCGGATGCG
1 GGGCGGGCGGATGCG
*
3253320 GGGCGGGTGGATGCG
1 GGGCGGGCGGATGCG
3253335 GGGCGG
1 GGGCGG
3253341 ATGCGGGGCG
Statistics
Matches: 34, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 34 1.00
ACGTcount: A:0.06, C:0.16, G:0.69, T:0.10
Consensus pattern (15 bp):
GGGCGGGCGGATGCG
Found at i:3253323 original size:11 final size:11
Alignment explanation
Indices: 3253309--3253351 Score: 50
Period size: 11 Copynumber: 3.5 Consensus size: 11
3253299 GATGTGGGGC
3253309 GGGCGGATGCG
1 GGGCGGATGCG
3253320 GGGCGGGTGGATGCG
1 GGGC----GGATGCG
3253335 GGGCGGATGCG
1 GGGCGGATGCG
3253346 GGGCGG
1 GGGCGG
3253352 GTAATGTCTC
Statistics
Matches: 28, Mismatches: 0, Indels: 8
0.78 0.00 0.22
Matches are distributed among these distances:
11 17 0.61
15 11 0.39
ACGTcount: A:0.07, C:0.16, G:0.67, T:0.09
Consensus pattern (11 bp):
GGGCGGATGCG
Done.