Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000964.1 Hibiscus syriacus cultivar Beakdansim tig00001926_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88883

Tables:   1   

This is table  1  of  1  ( 66 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
946--1033
3
30.0
3
74
13
76
61
2
0
36
1.09
946--1013
26
2.5
26
85
4
91
57
1
0
41
1.08
948--1019
11
6.5
11
72
20
60
58
1
0
40
1.07
4413--4445
16
2.0
17
88
5
50
12
33
9
45
1.73
5188--5310
44
2.7
45
81
6
133
36
13
8
40
1.76
5708--5758
26
2.0
26
84
0
66
35
0
1
62
1.06
6277--6315
19
2.1
19
95
0
69
46
0
0
53
1.00
8335--8380
20
2.3
20
96
0
83
17
26
13
43
1.85
10472--10513
19
2.2
19
95
0
75
57
9
11
21
1.63
11377--11439
11
5.9
11
73
14
60
57
1
1
39
1.18
11551--11624
28
2.6
28
82
0
76
47
25
0
27
1.52
11549--11618
21
3.4
19
75
16
59
45
27
0
27
1.54
11549--11624
14
5.4
14
74
0
62
46
27
0
26
1.53
11585--11624
21
1.9
21
84
0
53
42
27
0
30
1.56
18436--18466
3
10.3
3
100
0
62
35
0
0
64
0.94
20190--20227
19
2.0
19
89
0
58
47
2
2
47
1.30
20465--20490
2
13.0
2
100
0
52
50
0
0
50
1.00
22717--23008
117
2.6
110
85
8
358
25
21
14
38
1.91
24018--24100
9
9.7
9
72
15
77
10
10
2
75
1.13
24027--24099
16
4.4
16
75
13
76
10
9
2
76
1.11
24029--24100
25
2.9
25
97
0
135
11
11
2
75
1.16
35186--35223
19
2.0
19
89
0
58
47
2
2
47
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37492--37525
3
11.7
3
87
6
52
61
0
0
38
0.96
40146--40318
63
2.7
63
83
1
213
23
19
14
42
1.88
42362--42439
40
2.0
40
100
0
156
37
19
12
30
1.89
43728--43890
76
2.1
76
81
6
179
32
14
11
41
1.81
43895--44917
39
26.3
39
93
1
1685
30
19
15
34
1.93
45042--45127
42
2.1
41
82
6
102
29
15
20
34
1.93
45150--45457
136
2.3
136
90
0
481
35
16
20
27
1.94
45469--45631
70
2.3
71
86
6
224
38
16
20
25
1.93
45925--45973
3
16.7
3
91
4
82
36
0
0
63
0.95
49705--49747
22
2.0
22
95
0
77
51
16
0
32
1.45
49707--49755
22
2.2
22
85
3
62
55
16
0
28
1.42
49710--49859
80
1.9
80
97
0
282
52
15
0
32
1.43
49695--50307
134
4.6
135
83
11
753
52
13
0
33
1.42
49790--50127
54
6.3
54
81
11
358
52
13
0
33
1.44
49839--49881
22
2.0
22
100
0
86
51
13
0
34
1.42
49841--49889
22
2.2
22
88
3
71
55
14
0
30
1.40
49844--50307
80
5.8
80
77
12
443
52
13
0
33
1.43
49710--50208
214
2.3
214
96
1
910
52
14
0
33
1.44
49895--49969
22
3.2
22
75
14
69
54
16
1
28
1.50
50107--50180
22
3.2
22
79
9
85
51
16
0
32
1.45
50188--50230
22
2.0
22
95
0
77
51
11
0
37
1.39
50190--50238
22
2.2
22
85
3
62
55
12
0
32
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50242--50284
22
2.0
22
100
0
86
51
13
0
34
1.42
50244--50292
22
2.2
22
88
3
71
55
14
0
30
1.40
50287--50324
15
2.6
15
95
4
69
57
0
0
42
0.98
51164--51215
26
2.1
24
82
13
61
17
1
3
76
1.02
55023--55079
13
4.3
13
77
16
55
78
0
19
1
0.83
55039--55072
17
1.9
18
94
5
61
76
0
23
0
0.79
55034--55079
20
2.3
19
85
10
65
78
0
21
0
0.76
56992--57186
90
2.2
90
94
0
336
25
18
22
34
1.96
57319--57362
22
2.1
21
83
8
54
20
15
13
50
1.78
57322--57407
34
2.4
36
83
12
115
25
18
12
43
1.86
57359--57514
65
2.4
66
77
6
156
24
21
14
39
1.91
57578--57737
66
2.4
66
79
9
166
26
18
13
41
1.88
58195--59262
91
11.7
91
91
1
1630
37
15
22
24
1.93
61599--61650
15
3.5
15
91
0
86
51
0
0
48
1.00
72692--72800
45
2.4
47
76
14
113
68
1
6
22
1.22
72722--72807
45
2.0
43
86
11
122
61
3
8
26
1.40
72810--72870
13
4.6
13
74
10
61
83
1
4
9
0.86
72808--72872
27
2.4
28
82
12
82
81
1
6
10
0.93
74000--74033
10
3.6
9
88
11
50
52
2
0
44
1.16
74040--74088
22
2.2
21
79
10
53
40
20
12
26
1.87
74115--74158
23
1.9
23
81
9
54
52
13
0
34
1.41
87845--87884
20
2.0
20
95
0
71
22
32
15
30
1.94

Tables:   1

The End!