Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000968.1 Hibiscus syriacus cultivar Beakdansim tig00001933_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83714

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5062--5102
19
2.2
18
86
4
55
36
24
7
31
1.83
6550--6716
40
4.2
40
69
13
105
36
14
17
31
1.90
7999--8069
34
2.2
33
90
7
110
49
8
5
36
1.57
9288--9371
39
2.2
40
78
6
91
35
17
23
22
1.95
9833--9874
19
2.2
19
100
0
84
38
9
26
26
1.87
12507--12631
42
3.0
42
92
0
205
36
8
18
36
1.80
12755--12812
27
2.1
28
90
3
91
60
8
10
20
1.55
13144--13198
28
2.0
28
92
7
94
43
16
21
18
1.88
22278--22321
23
2.0
21
91
8
70
72
0
0
27
0.85
39590--39647
20
2.6
22
86
10
75
31
18
22
27
1.97
40317--40372
24
2.3
24
96
0
103
39
16
16
28
1.89
40870--40911
11
3.9
11
93
3
59
19
33
28
19
1.96
42230--42293
23
2.8
23
90
0
101
15
26
25
32
1.95
53497--53540
15
2.8
16
79
3
54
36
9
4
50
1.55
69823--69852
14
2.1
14
93
0
51
43
0
6
50
1.28
70448--70478
2
15.5
2
100
0
62
48
0
0
51
1.00
74081--74170
30
3.0
30
96
0
171
24
20
22
33
1.97
77248--77347
22
4.5
22
97
0
182
28
32
26
14
1.94
78687--78849
64
2.5
64
81
9
163
25
22
19
32
1.97
80923--81099
65
2.7
63
78
9
153
28
19
23
28
1.98
80943--81099
65
2.4
64
84
5
183
28
19
22
29
1.98
81596--81642
2
23.5
2
100
0
94
51
0
0
48
1.00

Tables:   1

The End!