Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000097.1 Hibiscus syriacus cultivar Beakdansim tig00000180_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40978

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
246--286
17
2.4
17
81
18
50
78
2
9
9
1.06
313--387
31
2.4
29
79
14
80
69
8
6
16
1.34
492--519
2
14.0
2
100
0
56
50
0
0
50
1.00
538--597
24
2.5
24
81
2
68
71
3
1
23
1.10
630--678
2
25.5
2
87
8
75
48
2
0
48
1.12
1166--1208
17
2.5
17
85
7
52
37
23
11
27
1.89
1787--1823
20
1.9
20
88
5
58
27
13
2
56
1.50
2084--2160
23
3.6
21
72
10
75
23
33
18
24
1.96
2084--2133
21
2.3
21
86
6
64
20
38
18
24
1.93
23406--23467
25
2.5
25
78
0
70
29
1
9
59
1.38
24967--24997
12
2.6
12
94
0
53
22
19
25
32
1.97
25499--25574
31
2.5
31
84
4
91
44
6
18
30
1.75
26314--26356
21
2.0
21
86
0
59
30
27
25
16
1.97
26383--26420
20
1.9
20
88
0
58
23
34
31
10
1.89
26427--26451
13
1.9
13
100
0
50
80
0
20
0
0.72
33144--33186
21
2.0
21
86
0
59
30
27
25
16
1.97
33213--33250
20
1.9
20
88
0
58
23
34
31
10
1.89
33893--33937
23
2.0
23
86
0
63
20
26
26
26
1.99
34105--34136
10
3.2
10
95
0
55
25
21
0
53
1.46
34526--34776
66
3.8
66
81
6
301
43
9
15
31
1.78

Tables:   1

The End!