Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000974.1 Hibiscus syriacus cultivar Beakdansim tig00001950_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51005

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1435--1469
18
2.0
17
88
5
52
57
11
2
28
1.48
3369--3417
16
2.7
19
78
12
59
59
16
0
24
1.37
4503--4779
88
3.1
88
84
8
328
32
24
20
22
1.98
9333--9575
88
2.7
89
87
6
357
32
25
22
20
1.98
13177--13271
15
6.0
15
68
23
52
60
5
1
33
1.26
13718--13809
31
3.0
31
76
9
98
34
6
18
40
1.77
15424--15462
16
2.4
16
82
4
51
53
12
7
25
1.65
17713--17758
24
1.9
24
95
0
83
30
15
15
39
1.88
29568--29618
26
2.0
26
92
0
84
37
31
11
19
1.88
35911--35960
26
1.9
26
91
0
82
36
28
12
24
1.91
39861--39980
63
1.9
63
94
0
213
35
19
19
25
1.95
42482--42599
42
2.7
43
84
3
157
27
16
6
48
1.72

Tables:   1

The End!