Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000977.1 Hibiscus syriacus cultivar Beakdansim tig00001953_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52265

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9587--9621
18
1.9
18
94
0
61
34
22
8
34
1.85
11199--11350
76
2.0
76
100
0
304
36
10
28
23
1.88
14646--14700
26
2.0
26
86
6
74
70
3
10
14
1.28
18722--18765
21
2.1
21
100
0
88
34
4
34
27
1.77
19170--19215
20
2.3
20
85
3
58
28
2
6
63
1.31
19286--19325
12
3.3
12
92
0
71
10
50
15
25
1.74
19316--19404
6
14.8
6
96
0
133
5
33
28
32
1.80
19304--19404
18
5.6
18
90
0
130
5
35
26
31
1.81
21415--21446
16
2.0
16
100
0
64
37
6
18
37
1.76
38407--38449
20
2.2
20
91
0
68
30
23
13
32
1.93
40576--40614
21
1.9
20
85
15
53
33
17
15
33
1.92
45170--45203
13
2.5
14
90
4
52
23
23
0
52
1.47

Tables:   1

The End!