Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000098.1 Hibiscus syriacus cultivar Beakdansim tig00000181_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59825

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7349--7393
16
2.9
16
78
18
51
28
2
0
68
1.01
10358--10388
6
5.2
6
92
0
53
19
0
32
48
1.49
10488--10539
26
2.0
27
88
3
79
19
1
21
57
1.50
12312--12472
64
2.5
64
78
3
162
32
19
22
26
1.97
13149--13232
22
4.0
22
81
12
113
23
20
27
28
1.99
13856--14135
83
3.4
83
87
1
411
28
20
17
33
1.95
17753--17865
35
3.2
35
83
2
136
41
21
0
36
1.59
17761--17864
36
2.9
35
84
2
127
43
21
0
34
1.59
43082--43155
36
2.1
36
100
0
148
24
33
17
24
1.96
50853--51389
183
2.9
183
95
0
950
27
20
21
30
1.98
52545--52658
36
3.2
35
68
9
95
26
16
12
44
1.83
52529--52690
72
2.2
76
85
8
219
28
19
11
40
1.86
52709--53004
106
2.9
104
89
2
454
30
19
12
37
1.89
52904--52979
36
2.1
36
87
0
107
25
19
14
40
1.89
53179--53802
105
6.0
105
89
2
898
34
26
17
22
1.96
54294--54396
36
2.8
37
85
2
136
40
15
15
28
1.88
54752--54787
18
2.1
18
89
5
56
25
5
2
66
1.27
55820--55862
22
2.0
21
81
4
50
37
0
2
60
1.10
55837--55911
28
2.6
30
83
10
93
41
0
0
58
0.98
55847--55898
18
2.9
18
73
0
59
48
0
0
51
1.00
55828--55928
30
3.5
30
76
11
86
41
0
0
57
1.05
56785--56814
15
2.0
15
93
0
51
56
0
0
43
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57453--57490
19
2.0
19
89
0
58
55
2
2
39
1.28
58159--58208
20
2.5
20
90
6
75
26
28
10
36
1.88

Tables:   1

The End!