Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000981.1 Hibiscus syriacus cultivar Beakdansim tig00001964_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54060

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1275--1524
83
3.0
84
85
5
316
30
3
13
53
1.56
2119--2152
10
3.5
10
92
4
52
23
0
0
76
0.79
3682--3708
14
1.9
14
100
0
54
37
11
0
51
1.37
7944--7983
21
1.9
21
89
0
62
27
0
35
37
1.57
8672--8709
20
1.9
20
88
0
58
10
26
36
26
1.89
15132--15281
29
5.3
29
75
8
139
48
15
2
34
1.56
15289--15327
18
2.2
18
95
0
69
12
15
51
20
1.76
22404--22565
29
5.8
28
80
2
139
48
16
1
33
1.57
30447--30489
22
1.9
23
85
4
61
51
4
2
41
1.35
35383--35573
92
2.1
92
92
0
319
26
7
19
47
1.75
42659--42687
2
15.0
2
92
7
51
51
0
0
48
1.00
45329--45461
37
3.6
37
87
2
187
36
20
18
25
1.95
45329--45477
73
2.0
73
84
5
194
36
20
18
24
1.95
45859--46371
54
9.4
54
81
2
580
32
19
25
22
1.97
45859--46342
109
4.5
109
87
0
650
32
19
25
22
1.97
45859--46371
163
3.1
164
82
2
622
32
19
25
22
1.97
45859--46853
55
18.3
55
81
6
627
33
16
24
25
1.96
46348--46853
217
2.3
218
89
1
757
33
14
22
29
1.94
50898--50977
38
2.1
38
92
0
133
42
10
11
36
1.74

Tables:   1

The End!