Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000982.1 Hibiscus syriacus cultivar Beakdansim tig00001965_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56396

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
221--250
15
2.0
15
93
0
51
23
13
23
40
1.90
2892--2917
2
13.0
2
100
0
52
50
0
0
50
1.00
4138--4164
2
13.5
2
100
0
54
48
0
0
51
1.00
5555--5601
23
2.0
24
91
4
78
40
17
6
36
1.75
6336--6393
28
2.1
28
86
0
80
29
8
20
41
1.82
7002--7232
75
3.0
76
92
3
385
32
4
6
56
1.46
7114--7229
36
3.1
36
69
24
114
31
2
8
57
1.42
21197--21235
19
2.1
19
95
0
69
43
10
12
33
1.77
33101--33160
25
2.4
25
100
0
120
43
13
10
33
1.77
35727--35770
23
1.9
23
90
0
70
18
15
31
34
1.92
43324--43374
18
2.9
18
80
11
54
52
7
1
37
1.42
45107--45145
3
13.0
3
100
0
78
66
0
0
33
0.92
47093--47982
81
11.0
81
87
0
1226
35
12
20
31
1.89
47982--48244
46
5.7
46
84
2
341
44
11
21
22
1.85
47984--48248
137
1.9
138
87
3
392
43
11
21
23
1.85

Tables:   1

The End!