Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000984.1 Hibiscus syriacus cultivar Beakdansim tig00001969_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53315

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9136--9922
403
1.9
405
84
4
1061
30
16
22
31
1.95
11870--11916
19
2.6
18
83
12
60
65
0
14
19
1.26
12318--12368
19
2.6
20
90
3
77
43
5
15
35
1.71
13257--13316
30
2.0
31
86
3
86
55
8
8
28
1.59
15921--15971
11
4.8
11
81
13
54
0
21
0
78
0.75
19589--19618
13
2.4
13
94
5
53
26
30
0
43
1.55
22389--22448
30
2.0
31
87
9
88
26
8
11
53
1.65
23807--23846
19
2.0
20
90
4
64
22
12
0
65
1.26
24114--24157
11
4.2
10
91
2
61
84
0
15
0
0.63
25930--25959
11
2.6
11
94
5
51
90
10
0
0
0.47
35732--35771
19
2.0
20
85
4
55
20
12
2
65
1.38
42482--42521
19
2.0
20
85
4
55
65
2
12
20
1.38
46657--46692
16
2.2
16
100
0
72
11
11
5
72
1.28
46683--46736
22
2.4
23
84
3
74
1
18
3
75
1.03
46932--46970
19
2.1
19
90
9
62
64
0
15
20
1.30
49040--49097
23
2.6
23
83
2
73
65
8
15
10
1.46
51823--51852
13
2.4
12
94
5
51
43
0
30
26
1.55

Tables:   1

The End!