Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000985.1 Hibiscus syriacus cultivar Beakdansim tig00001970_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82098

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1767--1991
88
2.5
88
88
5
337
19
22
25
32
1.97
7953--8001
19
2.7
19
81
12
59
24
0
16
59
1.37
7953--8006
18
3.1
17
80
17
65
25
0
14
59
1.36
12840--13285
224
2.0
226
83
6
573
48
12
6
32
1.68
15915--15989
29
2.6
30
80
14
86
65
1
0
33
1.01
15940--15990
23
2.3
22
83
6
66
68
1
0
29
1.00
16026--16127
44
2.3
44
96
1
186
44
1
6
47
1.41
18987--19031
21
2.1
21
84
8
56
28
11
8
51
1.68
21131--21348
75
2.9
75
88
1
332
52
19
4
23
1.65
21293--21388
40
2.4
40
89
0
138
56
19
3
20
1.56
24092--24129
19
2.0
19
94
0
67
50
5
28
15
1.66
26016--26085
27
2.6
27
86
4
88
45
24
10
20
1.81
33126--33175
26
1.9
26
91
0
82
40
24
12
24
1.88
33431--33471
21
2.0
21
90
0
64
39
7
12
41
1.70
36611--36665
26
2.1
26
96
0
101
16
9
30
43
1.79
43393--43468
31
2.4
32
78
8
93
27
27
26
18
1.98
49802--49873
29
2.4
29
81
4
72
40
1
19
38
1.60
49828--50084
56
4.6
55
74
12
209
32
3
17
47
1.63
49828--50092
29
9.4
28
71
11
139
32
3
16
47
1.64
57275--57314
20
2.0
20
90
4
64
37
0
7
55
1.29
57515--57579
21
3.4
21
64
27
63
15
38
23
23
1.92
60123--60153
3
10.3
3
92
0
53
32
0
0
67
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62410--62449
20
2.0
20
90
4
64
37
0
7
55
1.29
67650--67684
6
5.8
6
86
0
52
37
48
11
2
1.54
68419--68680
21
12.3
22
74
13
203
37
21
19
21
1.94
68415--68666
42
5.9
42
82
7
278
37
22
19
21
1.95
68440--68680
65
3.8
65
89
4
341
36
21
19
21
1.95
68406--68680
86
3.2
84
76
11
290
36
21
20
22
1.95
71409--71534
46
2.7
46
77
0
135
30
19
17
33
1.95
74958--75112
32
4.9
32
70
4
116
14
13
23
49
1.78
74952--75125
95
1.8
95
83
2
233
15
12
22
48
1.79
74956--75112
16
9.9
16
69
1
73
14
13
24
48
1.79
75598--75658
2
31.0
2
93
3
106
49
0
0
50
1.00
78946--79294
54
6.5
53
87
3
464
26
18
19
34
1.95
78959--79294
163
2.1
162
89
1
512
27
18
18
35
1.95
78946--79294
108
3.2
108
89
1
520
26
18
19
34
1.95

Tables:   1

The End!