Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000988.1 Hibiscus syriacus cultivar Beakdansim tig00001978_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32698

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
423--540
60
2.0
59
86
6
166
33
24
5
37
1.77
3571--4413
421
2.0
421
96
0
1542
41
13
17
26
1.88
4996--5129
71
1.9
68
83
7
171
29
10
8
51
1.65
7682--7724
18
2.4
18
92
0
68
13
6
16
62
1.51
7816--7860
22
2.2
22
84
11
60
11
17
2
68
1.29
10756--10799
18
2.4
18
100
0
88
27
6
6
59
1.49
14547--14626
25
3.1
25
79
16
76
42
3
2
51
1.33
19433--19580
41
3.6
41
77
10
135
34
16
21
27
1.95
20547--20734
57
3.3
57
99
0
367
29
5
13
51
1.64
20969--21085
41
2.9
41
84
2
119
26
18
20
34
1.96
20991--21098
41
2.6
40
81
11
130
24
20
22
33
1.97
22011--22101
46
2.0
46
97
0
173
10
24
15
49
1.76
29283--29338
21
2.7
21
88
0
94
37
19
42
0
1.52
29314--29406
21
4.4
21
86
0
114
41
20
36
1
1.59
29802--29906
43
2.4
43
81
6
106
33
24
17
24
1.96
29828--30078
129
1.9
129
79
3
281
29
25
17
27
1.98
29845--30078
43
5.4
43
85
3
247
28
25
17
27
1.98

Tables:   1

The End!