Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000994.1 Hibiscus syriacus cultivar Beakdansim tig00001988_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45462

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
776--812
19
1.9
19
88
0
56
51
2
5
40
1.39
2591--3167
112
5.1
112
93
0
911
46
14
14
24
1.81
3039--3493
182
2.5
182
90
1
716
43
13
15
27
1.84
4424--4465
17
2.4
17
88
4
57
64
0
14
21
1.29
5880--5910
2
15.0
2
93
6
53
0
48
3
48
1.17
9257--9289
11
2.8
12
86
9
50
24
0
9
66
1.20
11720--11749
6
5.0
6
95
0
51
50
13
16
20
1.78
20656--20749
30
3.1
30
89
3
127
29
27
22
20
1.98
20737--20837
31
3.2
31
80
8
132
33
18
18
28
1.95
21663--21707
21
2.1
21
87
0
63
15
24
28
31
1.96
24608--24701
30
3.1
30
89
3
127
29
27
22
20
1.98
24689--24789
31
3.2
31
80
8
132
33
18
18
28
1.95
25559--25583
2
12.5
2
100
0
50
48
0
0
52
1.00
25616--25671
29
1.9
29
82
7
69
44
23
1
30
1.63
26058--26102
21
2.1
21
87
0
63
15
24
28
31
1.96
37132--37165
17
1.9
17
88
5
50
41
0
0
58
0.98

Tables:   1

The End!