Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010005.1 Kokia drynarioides strain JFW-HI SEQ_124764, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84986

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
950--1074
23
5.3
23
79
7
126
12
20
21
45
1.83
950--1074
48
2.7
46
83
9
146
12
20
21
45
1.83
3241--3291
24
2.1
24
96
0
93
56
9
11
21
1.63
3366--3416
24
2.1
24
88
0
75
52
9
13
23
1.70
3211--3589
125
3.0
125
95
0
686
47
10
12
29
1.75
3491--3541
24
2.1
24
96
0
93
56
9
11
21
1.63
5481--5555
24
3.1
24
82
3
80
53
8
14
24
1.68
16857--16943
43
2.0
43
86
8
124
31
14
3
50
1.60
20306--20394
21
4.6
21
73
18
86
28
4
13
53
1.59
24967--25033
30
2.2
30
84
5
82
22
16
17
43
1.88
28033--28062
15
2.1
14
93
6
51
70
3
0
26
1.03
28783--28897
30
3.9
30
82
5
128
33
4
21
40
1.73
38896--38925
3
10.0
3
100
0
60
33
66
0
0
0.92
40729--40800
31
2.2
32
80
4
83
34
1
8
55
1.39
52396--52450
2
27.5
2
100
0
110
49
0
0
50
1.00
55036--55070
16
2.1
18
89
10
56
48
0
0
51
1.00
54971--55065
51
1.9
50
82
4
120
45
3
1
50
1.24
59298--59341
23
1.9
23
85
0
61
45
2
9
43
1.48
84664--84789
56
2.4
53
81
13
143
45
3
10
40
1.57
84945--84974
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!