Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010018.1 Kokia drynarioides strain JFW-HI SEQ_124783, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  103170

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
437--467
10
2.9
11
90
9
55
61
0
9
29
1.28
432--465
10
3.3
10
88
8
50
55
0
8
35
1.31
1087--1193
23
4.7
22
81
9
117
12
22
27
38
1.89
9546--9584
20
2.0
20
85
5
53
53
5
10
30
1.56
9742--9843
20
5.7
18
75
15
79
41
0
6
50
1.35
9700--9835
68
2.0
69
91
1
220
41
1
4
52
1.30
16280--16380
25
4.0
25
75
8
71
24
16
21
36
1.94
18899--18930
16
2.0
16
93
0
55
53
3
18
25
1.59
19649--19720
24
2.9
25
87
2
101
20
23
25
30
1.99
19830--19876
17
2.6
17
93
6
76
34
17
8
40
1.79
29243--29268
12
2.2
12
100
0
52
57
0
42
0
0.98
29668--29717
18
2.8
18
79
8
59
16
16
8
60
1.58
35234--35293
21
2.8
20
80
9
66
36
18
21
23
1.95
36522--36560
13
2.8
13
88
7
51
38
2
10
48
1.51
38294--38384
37
2.4
37
78
12
96
41
1
4
52
1.28
38351--38400
20
2.7
19
77
20
52
44
2
2
52
1.24
38602--38649
22
2.0
26
84
15
68
39
8
14
37
1.76
40553--40882
52
6.4
52
88
1
484
26
14
23
36
1.93
45875--46269
52
7.6
52
91
1
587
26
13
23
36
1.92
47789--47883
30
3.2
30
92
0
154
22
12
9
55
1.65
48443--48491
13
3.8
13
80
0
53
34
24
16
24
1.95
52661--52707
16
2.7
18
78
18
55
63
4
2
29
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52928--52987
28
2.1
29
84
6
79
61
5
5
28
1.38
52936--52999
29
2.2
30
83
8
78
60
3
7
28
1.39
53032--53071
20
2.0
20
85
9
55
62
0
2
35
1.09
53450--53487
18
2.1
18
85
9
51
31
0
2
65
1.06
53530--53623
16
6.2
15
68
25
56
28
3
1
67
1.13
53899--53923
13
1.9
13
100
0
50
52
8
0
40
1.31
54570--54616
25
1.9
25
82
4
60
36
0
12
51
1.40
56723--56762
16
2.5
16
91
0
62
27
22
22
27
1.99
56645--56901
128
2.0
128
97
0
487
26
27
14
31
1.95
58122--58166
24
1.9
23
81
4
54
37
0
2
60
1.09
58339--58405
7
8.1
8
71
22
50
26
2
1
68
1.12
58343--58417
27
3.0
25
75
9
80
30
2
1
65
1.15
58350--58405
17
3.3
17
76
16
62
25
3
1
69
1.14
59612--59664
23
2.4
23
81
9
58
33
3
3
58
1.34
60162--60216
25
2.2
24
83
3
74
49
5
3
41
1.43
63114--63189
27
2.9
27
74
16
70
57
2
2
36
1.26
71446--71507
29
2.1
31
81
6
74
32
14
17
35
1.90
72394--72432
19
2.2
19
86
9
55
48
2
2
46
1.29
76548--76601
20
2.7
20
77
11
56
68
0
0
31
0.90

Tables:   1

The End!