Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010056.1 Kokia drynarioides strain JFW-HI SEQ_124830, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65979

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
525--857
167
2.0
164
96
2
614
42
11
10
36
1.74
2089--2301
106
2.0
106
97
0
399
39
10
15
34
1.81
4509--4544
6
5.8
6
93
6
63
33
0
66
0
0.92
5866--5948
24
3.2
24
69
18
67
42
6
4
46
1.49
5905--5961
24
2.4
24
87
0
78
38
7
5
49
1.53
10039--10115
29
2.6
31
84
9
92
31
11
6
50
1.64
10061--10123
29
2.1
30
88
5
92
34
12
4
47
1.63
10230--10291
26
2.4
25
81
10
63
38
3
1
56
1.25
11533--11577
22
2.0
22
100
0
90
35
8
4
51
1.54
20932--20984
3
17.7
3
76
7
54
33
30
0
35
1.58
30533--30575
18
2.4
18
88
7
61
46
0
0
53
1.00
30928--30956
14
2.0
15
93
6
51
48
0
0
51
1.00
32243--32334
10
9.5
10
66
27
56
58
1
5
34
1.28
32719--32746
2
14.0
2
100
0
56
50
0
0
50
1.00
36452--36564
55
2.1
55
98
0
217
39
13
29
17
1.88
38347--38380
17
2.0
17
94
0
59
44
0
2
52
1.16
38820--38880
33
1.9
33
90
6
99
55
0
1
42
1.09
38822--38893
33
2.2
32
82
7
92
56
0
1
41
1.07
44770--44833
31
2.0
31
82
8
76
25
0
9
65
1.22
44888--44986
27
3.7
27
81
0
117
18
29
28
24
1.98
47419--47457
18
2.3
18
86
8
55
35
20
0
43
1.52
47552--47649
48
2.0
48
96
0
178
35
12
5
46
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55349--55827
241
2.0
241
98
0
922
22
27
18
30
1.97
56597--56650
26
2.1
25
83
10
65
64
7
0
27
1.20
56603--56652
20
2.5
20
79
17
52
68
6
0
26
1.13
60128--60154
2
13.5
2
100
0
54
51
0
0
48
1.00
62713--62799
26
3.1
26
71
20
68
34
0
1
64
1.01
62713--62800
28
3.1
28
71
21
74
35
0
1
63
1.02
63691--63763
30
2.4
30
80
15
78
39
1
1
57
1.16

Tables:   1

The End!