Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010058.1 Kokia drynarioides strain JFW-HI SEQ_124832, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  107764

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1763--1803
5
8.2
5
80
20
50
43
0
0
56
0.99
1763--1804
14
2.9
14
80
20
50
45
0
0
54
0.99
9749--9813
31
2.1
31
94
0
112
50
13
3
32
1.57
15545--15576
15
2.0
17
88
11
50
28
6
3
62
1.34
19394--19420
6
4.5
6
100
0
54
0
14
0
85
0.61
32934--32961
13
2.2
13
100
0
56
10
39
7
42
1.67
46793--46826
15
2.2
16
89
5
52
41
0
2
55
1.15
57797--57901
52
2.0
52
92
0
174
43
15
2
38
1.61
61063--61088
12
2.2
12
100
0
52
84
0
15
0
0.62
75340--75383
21
2.1
21
86
0
61
13
2
4
79
0.98
83288--83613
163
2.0
163
95
0
580
30
17
20
31
1.96
98318--98360
11
3.8
11
80
17
52
65
0
0
34
0.93
98315--98390
27
2.9
27
77
16
79
60
2
0
36
1.11
98320--98390
23
3.0
23
80
14
56
60
1
0
38
1.06
99071--99103
17
2.0
17
94
5
59
12
3
0
84
0.72
99938--100040
30
3.5
29
81
6
118
38
14
1
44
1.56
99938--100090
60
2.6
59
80
6
148
38
18
3
39
1.69
100017--100092
30
2.5
30
78
4
82
38
21
5
35
1.76

Tables:   1

The End!