Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001006.1 Kokia drynarioides strain JFW-HI SEQ_112213, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  105443

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
670--713
7
6.4
7
81
5
54
31
27
22
18
1.97
702--775
11
6.7
11
73
6
60
28
25
27
18
1.98
705--775
22
3.2
22
73
15
74
29
25
25
19
1.99
5243--5311
30
2.3
29
83
9
95
31
24
0
43
1.55
6971--7019
18
2.8
17
79
11
53
24
8
2
65
1.31
8304--9602
228
5.7
228
86
1
1370
22
27
20
29
1.98
15207--15243
17
2.2
17
90
0
56
51
0
10
37
1.37
15594--15636
19
2.3
18
80
11
50
44
2
6
46
1.43
16409--16469
24
2.5
24
81
0
68
52
8
11
27
1.66
18178--18219
17
2.5
17
96
0
75
57
11
26
4
1.54
44288--44355
34
2.0
34
100
0
136
41
17
11
29
1.85
49995--50192
80
2.5
75
80
8
209
49
7
5
38
1.52
67786--67833
21
2.2
21
81
3
51
29
2
18
50
1.59
68535--68590
22
2.4
24
88
8
80
67
8
8
14
1.40
68534--68593
23
2.5
25
84
13
81
66
11
8
13
1.44
69460--69508
2
24.0
2
95
4
89
48
2
0
48
1.12
69551--69613
25
2.7
23
82
5
72
58
0
3
38
1.14
72798--72879
10
8.7
10
67
20
52
37
1
2
58
1.19
72828--72887
17
3.3
18
72
22
54
36
1
1
60
1.17
72828--72888
19
3.3
19
72
22
58
36
1
1
60
1.16
72811--72888
18
4.3
18
68
16
54
33
1
2
62
1.17
74391--74705
165
1.9
165
85
3
438
41
12
14
31
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74543--74935
197
2.0
197
85
3
540
42
11
15
31
1.82
82472--82590
6
19.8
6
72
0
76
24
0
52
23
1.48
82469--82584
24
4.8
24
97
0
223
24
0
53
22
1.46
91963--92157
104
1.9
102
85
4
266
30
14
24
30
1.94
92000--92208
33
6.2
33
69
7
132
31
14
23
30
1.95
94511--94585
36
2.1
35
85
7
98
64
5
0
30
1.16
94537--94587
25
2.0
26
84
7
68
66
5
0
27
1.14
94701--94749
20
2.3
21
89
6
73
69
22
0
8
1.14
94715--94840
12
10.8
12
71
9
91
69
17
2
11
1.29
94701--94834
56
2.4
55
79
6
153
68
17
2
11
1.29
94714--94872
68
2.4
66
79
7
158
70
17
1
10
1.24
94825--94871
21
2.3
19
85
10
58
74
17
0
8
1.05
95938--96097
23
7.0
22
78
6
160
15
18
22
43
1.87
95962--96093
69
1.9
69
85
0
183
15
18
21
43
1.88
104417--104455
5
7.8
5
88
8
53
82
2
15
0
0.79
104428--104470
16
2.7
15
89
7
59
76
0
23
0
0.78

Tables:   1

The End!