Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010076.1 Kokia drynarioides strain JFW-HI SEQ_124854, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  93030

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
514--633
17
6.7
17
81
14
125
52
4
0
43
1.20
512--588
23
3.6
23
71
21
85
49
3
0
46
1.20
514--633
34
3.4
34
87
6
141
52
4
0
43
1.20
512--603
40
2.3
40
98
0
175
51
3
0
45
1.17
520--598
10
8.1
10
69
24
53
51
3
0
44
1.19
531--603
23
3.4
23
76
21
95
52
4
0
43
1.20
512--633
6
21.3
6
70
21
84
51
4
0
44
1.20
3265--3297
14
2.4
14
90
10
50
27
0
0
72
0.85
5049--5082
16
2.3
14
90
10
50
23
0
0
76
0.79
5220--5261
18
2.3
18
91
4
66
54
0
0
45
0.99
5591--5623
16
2.0
17
88
5
50
18
9
6
66
1.40
9332--9519
99
1.9
99
93
0
322
38
15
25
20
1.92
10426--10493
25
2.8
25
69
22
63
63
7
0
29
1.21
10647--10678
16
2.0
16
93
0
55
21
18
0
59
1.38
12738--12786
23
2.1
23
85
7
64
48
4
2
44
1.33
16661--16699
17
2.3
17
86
8
53
17
12
23
46
1.83
18183--18225
16
2.8
15
80
13
52
39
2
0
58
1.11
18782--18823
21
2.0
21
86
9
59
38
4
0
57
1.20
28730--28761
6
5.3
6
92
0
55
0
46
3
50
1.17
29294--29355
24
2.6
24
84
0
79
17
17
30
33
1.94
33470--33499
15
1.9
16
93
6
53
66
26
3
3
1.23
34152--34182
2
15.5
2
93
0
53
51
3
0
45
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41719--41750
11
2.9
11
90
0
55
43
3
15
37
1.63
43953--43991
20
1.9
21
89
5
62
69
2
0
28
1.02
44362--44425
27
2.4
27
83
0
83
39
40
17
3
1.65
44538--44620
24
3.5
24
73
6
87
24
33
13
28
1.93
50961--51028
20
3.3
20
81
2
82
33
10
4
51
1.56
57979--58019
22
1.9
21
90
5
64
29
29
17
24
1.97
58296--58372
40
1.9
41
83
2
102
32
7
5
54
1.51
59947--60004
31
1.9
31
89
3
91
60
6
0
32
1.23
69549--69665
56
2.1
56
87
3
164
40
11
14
33
1.83
69766--69796
13
2.4
13
100
0
62
38
0
22
38
1.54
74531--74639
3
37.0
3
79
3
69
36
4
0
57
1.25
74554--74668
58
2.0
58
100
0
230
31
8
1
58
1.39
85373--85479
52
2.1
52
98
0
205
31
30
14
22
1.94
91515--91573
31
1.9
31
89
0
91
49
8
3
38
1.50
92923--92992
4
17.2
4
79
8
79
68
0
31
0
0.90

Tables:   1

The End!