Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010103.1 Kokia drynarioides strain JFW-HI SEQ_124887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50895

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1394--1464
15
4.7
15
83
0
97
16
14
25
43
1.86
1496--1574
34
2.4
33
86
2
113
51
3
0
44
1.19
1496--1563
6
11.8
6
72
20
56
52
2
0
44
1.16
1496--1581
17
5.2
17
86
6
97
52
5
0
41
1.25
2440--2918
241
2.0
238
90
2
744
35
6
15
43
1.72
6222--6256
4
8.8
4
87
0
52
22
25
0
51
1.48
6223--6263
12
3.4
12
82
0
55
21
26
2
48
1.63
11399--11444
25
1.9
23
86
8
65
36
4
4
54
1.40
15950--16010
1
61.0
1
73
0
50
86
0
8
4
0.69
15950--16020
36
1.9
38
88
5
110
81
0
12
5
0.85
16418--17667
42
29.5
42
79
4
1074
20
18
23
33
1.94
17084--17667
167
3.5
168
90
0
902
21
18
24
35
1.95
16447--17671
209
5.8
209
78
4
1135
20
18
23
33
1.94
18419--18892
241
2.0
238
89
2
727
36
5
14
43
1.70
19644--19694
18
2.8
18
74
11
50
23
0
5
70
1.09
22331--22407
32
2.4
34
78
10
90
45
0
6
48
1.28
34660--34717
23
2.5
23
94
0
98
25
25
15
32
1.95
37523--37553
16
1.9
16
93
0
53
51
0
0
48
1.00
37825--37865
16
2.7
16
81
11
50
41
2
0
56
1.13
47355--47422
11
6.0
11
76
11
66
42
0
1
55
1.08
47368--47429
28
2.2
28
88
0
88
41
1
1
54
1.19
47362--47422
6
10.7
6
81
10
74
42
0
1
55
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47355--47422
17
4.0
17
92
0
109
42
0
1
55
1.08

Tables:   1

The End!