Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010108.1 Kokia drynarioides strain JFW-HI SEQ_124894, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41302

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
472--590
38
3.0
38
88
9
193
50
24
6
18
1.71
854--974
55
2.2
55
82
2
145
30
7
12
49
1.68
4163--4205
21
2.0
22
90
4
70
48
0
0
51
1.00
4912--4950
3
12.7
3
83
5
51
33
0
38
28
1.57
10620--10686
30
2.3
30
82
14
79
20
11
5
61
1.51
10757--10897
4
34.0
4
72
17
101
23
2
4
68
1.22
10757--10897
44
3.3
43
74
13
121
23
2
4
68
1.22
10760--10900
60
2.4
58
78
15
141
23
2
4
68
1.22
10895--10940
24
1.9
24
81
0
56
19
10
2
67
1.31
12206--12324
55
2.2
55
80
8
143
28
9
14
47
1.74
12486--12564
31
2.6
30
84
7
99
37
13
18
29
1.90
14209--14264
22
2.5
22
94
0
94
46
0
8
44
1.34
14542--14614
29
2.6
29
80
14
89
50
1
0
47
1.09
14538--14647
49
2.2
49
85
9
161
50
0
0
47
1.13
15658--15748
39
2.3
38
76
14
94
45
3
0
51
1.17
16617--16641
11
2.3
11
100
0
50
52
0
0
48
1.00
17034--17146
58
2.0
58
91
1
183
31
5
15
46
1.69
18866--18928
24
2.6
25
80
9
69
26
23
22
26
2.00
20803--20856
21
2.6
21
85
5
65
29
25
11
33
1.91
26787--26941
29
5.2
29
70
16
102
44
3
21
30
1.68
26718--26950
59
3.9
59
78
6
229
42
3
21
32
1.70
28023--28126
12
8.8
12
73
16
74
39
2
2
54
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28042--28128
15
5.9
14
78
16
63
37
3
3
55
1.34
28032--28111
3
25.7
3
73
12
63
37
2
2
57
1.26
29367--29906
98
5.5
98
86
1
674
16
25
20
37
1.93
29458--29962
49
10.3
48
71
9
292
16
26
19
38
1.92
34654--34732
24
3.2
25
77
12
76
24
18
22
34
1.97
40791--40829
20
1.9
21
89
5
62
23
7
7
61
1.49

Tables:   1

The End!