Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010115.1 Kokia drynarioides strain JFW-HI SEQ_124902, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  116968

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
977--1014
19
2.0
19
89
0
58
28
18
2
50
1.61
2052--2137
29
2.9
30
76
10
97
55
18
3
22
1.57
2788--2829
22
2.0
21
85
4
57
23
2
4
69
1.20
7416--7538
57
2.2
54
78
8
131
44
13
17
23
1.85
16355--16395
19
2.2
19
86
8
57
48
9
14
26
1.75
16609--16794
30
6.3
29
79
9
198
30
4
28
36
1.78
16615--16793
60
3.1
59
82
10
224
31
5
27
35
1.79
18779--19182
78
5.2
76
80
5
407
27
18
29
24
1.98
18805--19181
39
9.7
39
69
9
178
27
18
29
24
1.98
18821--19181
155
2.3
156
85
4
462
27
17
30
24
1.97
20213--20238
3
8.7
3
100
0
52
30
0
0
69
0.89
30956--30992
19
1.9
19
89
10
58
40
10
16
32
1.83
31207--31350
30
4.8
30
80
13
163
33
2
25
39
1.67
31218--31313
32
3.1
32
85
10
112
30
1
25
43
1.61
32932--32979
23
2.1
22
84
3
60
52
2
2
43
1.24
36229--36326
18
5.5
17
70
9
70
26
23
25
24
2.00
36229--36324
36
2.7
36
85
3
122
27
22
25
25
2.00
41613--41687
19
3.9
19
78
5
89
33
2
16
48
1.60
41619--41687
18
3.6
19
79
11
79
33
2
17
46
1.63
42499--42616
60
1.9
62
83
6
152
38
15
5
40
1.71
43804--43845
20
2.2
20
91
4
68
52
7
9
30
1.61
51342--51384
12
3.4
13
84
12
54
60
2
0
37
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52578--52660
14
6.0
14
75
12
82
37
25
21
15
1.93
64280--64321
21
2.0
21
95
0
75
28
21
9
40
1.84
65056--65102
23
2.0
25
87
8
71
23
14
6
55
1.63
69535--69583
22
2.2
23
85
3
64
59
28
0
12
1.34
69576--69649
22
3.2
22
75
17
69
66
8
0
25
1.19
70030--70093
18
3.6
18
80
4
76
23
25
26
25
2.00
71836--71875
21
1.9
21
85
10
55
67
15
2
15
1.34
71841--71893
27
2.0
27
84
0
70
64
16
1
16
1.39
71968--72012
17
2.4
18
82
10
56
75
6
2
15
1.11
88351--88552
95
2.1
95
97
0
377
23
11
30
35
1.90
88635--88683
21
2.3
21
85
0
80
24
20
22
32
1.98
89183--89226
18
2.5
17
85
10
54
43
4
15
36
1.68
93079--93113
17
2.1
17
100
0
70
28
11
17
42
1.83
95503--95540
12
3.2
12
81
3
51
47
0
0
52
1.00
97654--97704
21
2.4
21
90
0
84
27
7
11
52
1.65

Tables:   1

The End!