Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010130.1 Kokia drynarioides strain JFW-HI SEQ_124925, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  132774

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--40
3
13.3
3
100
0
80
35
0
0
65
0.93
420--468
3
16.3
3
100
0
98
34
0
0
65
0.93
1--838
428
2.0
418
97
2
1586
35
11
14
37
1.82
1158--1252
6
16.7
6
69
14
67
51
3
1
44
1.24
1158--1252
17
5.6
17
79
0
109
51
3
1
44
1.24
5316--5377
26
2.5
25
78
5
72
32
0
0
67
0.91
8009--8042
16
2.1
15
89
10
50
52
0
20
26
1.46
26518--26592
33
2.3
33
90
2
116
14
46
17
21
1.83
26467--26644
82
2.2
81
87
6
252
16
43
17
22
1.88
36722--36769
22
2.1
22
84
3
60
45
2
4
47
1.33
37717--37990
96
2.9
93
84
4
338
29
9
7
52
1.61
38752--38807
25
2.3
23
75
6
58
48
0
5
46
1.25
39596--39643
24
2.0
25
83
4
62
22
8
10
58
1.58
50665--50710
22
2.1
22
100
0
92
34
17
13
34
1.88
52221--52250
9
3.4
9
95
4
53
0
0
6
93
0.35
52219--52252
13
2.7
13
90
4
52
0
0
8
91
0.43
56565--56607
19
2.4
18
80
7
52
48
6
0
44
1.29
56872--57026
76
2.0
76
100
0
310
45
8
24
21
1.79
62455--62492
19
2.0
19
89
0
58
47
2
7
42
1.46
69780--69839
29
2.1
29
100
0
120
46
13
3
36
1.60
73480--73512
5
6.8
5
96
3
59
84
0
15
0
0.61
83332--83383
20
2.6
20
75
24
56
48
0
3
48
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83427--83469
18
2.4
18
80
0
50
44
0
4
51
1.22
85492--85531
13
3.1
14
82
13
50
0
30
5
65
1.14
91108--91142
18
1.9
19
88
11
56
17
31
20
31
1.95
92781--92821
19
2.2
19
95
0
73
46
7
4
41
1.53
94163--94193
16
2.0
16
93
6
55
12
9
12
64
1.50
97578--97632
3
18.3
3
100
0
110
67
0
0
32
0.91
97938--98006
32
2.2
32
100
0
138
49
11
15
23
1.77
98879--98954
36
2.1
36
90
0
116
40
13
15
30
1.86
108012--108065
28
1.9
28
85
7
74
29
27
9
33
1.88
110547--110842
121
2.5
120
88
2
423
33
2
15
48
1.58
124003--124092
39
2.3
39
96
0
162
18
44
7
28
1.78
131019--131067
24
2.0
24
81
14
57
61
22
4
12
1.48
131186--131245
24
2.5
24
86
0
84
51
10
13
25
1.71
132392--132490
23
4.4
22
87
5
128
40
27
21
11
1.87
132366--132490
45
2.7
46
80
13
141
40
25
23
11
1.87

Tables:   1

The End!