Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010137.1 Kokia drynarioides strain JFW-HI SEQ_124932, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95205

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1282--1360
6
13.7
6
70
12
58
50
2
2
44
1.29
1282--1393
35
3.2
35
80
8
120
51
2
1
43
1.26
1282--1393
18
6.4
17
77
6
116
51
2
1
43
1.26
1301--1359
11
5.2
11
76
10
57
54
3
1
40
1.27
5726--5772
16
2.9
16
81
6
51
68
4
8
19
1.33
6207--6282
23
3.3
21
75
15
62
38
6
2
52
1.41
6207--6286
25
3.5
23
78
13
76
37
6
2
53
1.40
6236--6823
144
4.0
144
80
9
676
46
7
3
42
1.50
6511--6566
25
2.3
24
84
6
85
57
5
0
37
1.22
6511--6574
25
2.6
24
78
4
74
51
4
0
43
1.22
6583--6823
52
4.7
51
69
15
140
46
8
3
41
1.50
7630--7950
124
2.6
126
84
2
423
38
21
16
23
1.92
7632--7970
84
4.1
84
82
3
389
39
20
16
23
1.92
7632--7970
42
8.1
42
82
4
348
39
20
16
23
1.92
10074--10666
294
2.0
292
88
3
879
26
22
17
33
1.96
11542--11940
193
2.1
194
94
0
701
28
18
19
34
1.95
11896--12295
39
9.9
39
78
10
358
23
17
27
31
1.97
11916--12297
81
4.7
80
81
8
391
24
17
28
30
1.97
11934--12298
123
3.0
122
87
3
504
23
17
28
30
1.97
12369--12929
99
5.8
98
72
11
384
25
21
17
35
1.95
12406--13027
192
3.2
190
82
3
719
24
22
17
36
1.95
13288--13859
210
2.7
209
89
2
853
24
22
17
35
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13825--13896
37
1.9
37
88
0
108
26
16
16
40
1.90
14159--14247
45
2.0
46
84
6
119
25
12
32
29
1.92
14252--14416
41
3.9
41
85
4
213
27
20
19
32
1.97
14252--14414
82
1.9
85
91
6
269
28
20
19
31
1.97
14756--14984
97
2.4
97
94
0
395
18
28
17
35
1.94
14760--14984
48
4.6
48
79
10
242
18
29
16
35
1.93
15916--15963
10
5.3
9
76
18
55
4
18
0
77
0.93
15911--15973
26
2.4
26
89
7
92
6
15
0
77
0.96
16864--16911
3
16.3
3
91
4
80
0
29
0
70
0.87
25987--26204
109
2.0
108
88
0
319
38
16
13
31
1.87
28365--28417
21
2.3
24
84
12
76
1
9
11
77
1.07
47240--47284
20
2.2
20
84
7
56
51
2
13
33
1.53
69567--69704
30
4.6
30
75
6
111
34
21
3
40
1.70
79877--80025
43
3.5
43
83
0
172
28
27
14
28
1.95
80303--80440
66
2.1
65
81
8
154
15
24
17
42
1.88
91139--91186
25
1.9
25
100
0
96
35
18
16
29
1.93
92888--93043
26
6.2
26
75
14
155
41
0
8
50
1.33
92920--92945
8
3.2
8
100
0
52
61
0
0
38
0.96

Tables:   1

The End!