Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010175.1 Kokia drynarioides strain JFW-HI SEQ_124980, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71027

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
173--197
9
2.8
9
100
0
50
28
0
0
72
0.86
3954--3993
20
1.9
22
85
10
57
37
2
12
47
1.55
5034--5074
8
5.1
8
78
21
50
24
0
2
73
0.96
5030--5075
16
2.9
16
78
21
60
26
0
2
71
0.97
6681--6726
24
1.9
23
86
8
65
50
0
4
45
1.21
8339--8385
23
2.1
21
88
7
67
53
2
8
36
1.44
10763--10878
55
2.1
55
98
0
223
18
15
28
37
1.91
16998--17041
18
2.4
18
100
0
88
31
29
25
13
1.94
18728--18783
23
2.4
23
100
0
112
30
26
8
33
1.87
25215--25266
21
2.4
22
87
3
70
19
21
25
34
1.96
26333--26386
18
3.0
18
72
0
54
40
0
5
53
1.24
28993--29056
24
2.7
24
97
0
119
37
25
29
7
1.84
28987--29066
24
3.5
22
84
5
63
38
26
26
8
1.85
31714--31744
3
10.3
3
100
0
62
67
0
32
0
0.91
37384--37425
6
7.0
6
100
0
84
16
16
33
33
1.92
41257--41313
27
2.2
26
87
6
80
33
5
0
61
1.18
59408--59433
13
2.0
13
100
0
52
84
7
0
7
0.77
67872--67951
31
2.6
31
88
4
117
45
8
26
20
1.80
70202--70305
6
16.8
6
82
5
82
15
39
2
42
1.62
70696--70730
17
2.0
18
88
5
54
34
8
2
54
1.46

Tables:   1

The End!