Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010176.1 Kokia drynarioides strain JFW-HI SEQ_124981, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  93874

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37--83
11
4.3
11
84
10
60
70
8
0
21
1.14
533--579
11
4.3
11
84
10
60
70
8
0
21
1.14
684--777
23
4.2
22
75
13
68
71
17
2
9
1.23
710--764
23
2.3
23
87
3
74
69
20
3
7
1.28
715--800
24
3.6
24
84
1
102
72
13
3
10
1.25
746--800
12
4.6
12
86
0
65
72
10
3
12
1.24
715--791
12
6.5
12
77
8
77
72
14
3
9
1.23
715--868
12
12.8
12
65
19
52
72
14
1
10
1.19
824--889
24
2.8
24
73
19
57
72
15
3
9
1.21
842--1351
256
2.0
254
96
0
921
43
15
10
31
1.79
1738--1779
22
1.9
22
85
9
59
30
2
0
66
1.04
18069--18096
6
4.7
6
100
0
56
17
50
0
32
1.47
19382--19438
30
1.9
30
89
7
89
5
19
33
42
1.74
19413--19564
3
50.7
3
67
0
52
11
24
28
35
1.90
19437--19564
36
3.6
36
86
0
157
12
24
28
35
1.92
19506--19564
15
3.9
15
79
0
73
6
25
30
37
1.82
20055--20096
18
2.3
18
79
0
57
4
28
30
35
1.78
28924--28988
31
2.1
31
97
0
121
23
15
15
46
1.83
40894--40945
24
2.1
25
82
7
61
46
1
5
46
1.38
48022--48073
18
3.1
17
76
15
54
46
0
0
53
1.00
48013--48067
21
2.5
23
77
11
62
52
0
0
47
1.00
56093--56125
16
2.0
17
88
5
50
27
3
3
66
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67672--67699
14
2.0
14
100
0
56
35
0
0
64
0.94
67666--67710
23
2.0
23
90
0
72
40
2
0
57
1.11
79089--79131
22
1.9
22
90
4
68
9
32
2
55
1.44
91922--91952
4
7.8
4
100
0
62
25
0
74
0
0.82
93548--93580
2
16.5
2
100
0
66
0
0
48
51
1.00

Tables:   1

The End!