Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010186.1 Kokia drynarioides strain JFW-HI SEQ_124995, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52173

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
546--574
14
2.1
14
100
0
58
27
34
13
24
1.93
2397--2518
30
4.1
29
80
11
131
38
26
0
34
1.62
2401--2518
60
2.0
61
88
5
177
39
24
0
34
1.61
2440--2543
30
3.5
28
78
13
102
37
24
0
37
1.62
2554--2650
30
3.3
29
72
21
92
34
23
8
34
1.85
2555--2718
60
2.7
59
86
1
211
29
22
8
39
1.84
4832--4867
18
2.0
18
94
0
63
52
27
0
19
1.46
5069--5111
18
2.4
18
84
0
59
30
4
9
55
1.52
5233--5262
3
10.0
3
100
0
60
33
0
33
33
1.58
5472--5513
22
1.9
22
85
0
57
33
2
0
64
1.07
6034--6068
16
2.1
18
89
10
56
71
0
0
28
0.86
9504--9533
2
14.5
2
93
6
51
46
0
3
50
1.18
9803--10340
270
2.0
268
97
0
1013
28
7
18
45
1.77
10481--10518
13
2.8
14
84
8
51
26
2
5
65
1.27
11441--11490
22
2.2
22
82
3
55
36
10
8
46
1.67
11449--11493
22
2.0
22
91
0
72
33
6
11
48
1.65
13100--13134
13
2.8
13
91
4
54
25
0
2
71
1.00
14143--14175
12
2.6
13
85
9
50
81
0
0
18
0.68
14245--14275
16
1.9
16
93
0
53
61
0
16
22
1.34
18947--19074
37
3.5
37
82
2
132
34
29
17
17
1.94
23024--23112
44
2.0
44
97
0
169
31
11
17
39
1.85
23186--23664
120
4.0
120
87
1
647
28
23
17
30
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25356--25497
70
2.0
70
100
0
284
46
12
4
36
1.62
26729--26789
29
2.1
29
96
0
113
21
21
18
39
1.93
28282--28351
36
1.9
36
82
0
86
30
5
27
37
1.80
29947--30086
62
2.3
62
85
7
187
46
6
3
43
1.46
30062--30093
15
2.1
16
94
5
57
46
6
3
43
1.44
32057--32207
58
2.6
58
90
2
232
31
1
22
44
1.61
32446--32471
9
2.9
9
100
0
52
42
23
11
23
1.86
32661--32701
18
2.3
18
86
0
55
24
7
9
58
1.55
33572--33652
30
2.6
31
78
16
80
54
1
0
44
1.08
33604--33649
23
2.0
24
82
4
58
56
2
0
41
1.11
41104--41139
18
1.9
18
88
5
54
75
5
8
11
1.19
41664--42299
319
2.0
320
92
1
1062
38
10
18
32
1.85
42513--42558
25
1.9
25
86
8
69
34
2
6
56
1.37
46714--46756
19
2.2
20
80
19
56
37
0
0
62
0.95
46714--46762
18
2.7
18
84
6
55
36
0
0
63
0.95
48606--48668
18
3.6
18
73
18
60
73
3
1
22
1.07
51012--51081
16
4.3
16
81
3
95
40
1
0
58
1.07
51038--51084
6
8.3
6
77
13
55
44
2
0
53
1.12
51039--51100
11
5.5
11
73
11
54
46
3
3
46
1.35
51124--51203
26
3.1
26
62
22
60
42
27
11
18
1.84

Tables:   1

The End!