Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010188.1 Kokia drynarioides strain JFW-HI SEQ_124999, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22750

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66--109
13
3.3
14
81
12
65
15
0
38
45
1.47
66--109
7
6.6
7
89
5
65
15
0
38
45
1.47
67--119
26
2.0
26
89
7
81
15
1
41
41
1.57
393--459
7
10.1
7
83
6
79
16
1
41
40
1.57
394--459
6
10.2
6
82
8
60
16
1
42
39
1.58
1--751
342
2.2
338
94
3
1308
35
13
19
32
1.90
746--1058
7
47.0
7
75
13
166
17
0
33
48
1.50
735--989
48
5.3
46
74
15
164
16
0
34
49
1.46
742--1058
14
23.8
14
74
14
228
17
0
33
48
1.50
842--1014
13
14.4
11
70
22
93
17
0
36
46
1.48
825--1014
6
30.3
6
70
14
82
17
0
35
46
1.48
781--1014
25
9.5
23
73
19
140
17
0
35
47
1.48
1270--1361
21
4.4
21
69
20
75
42
10
31
15
1.81
1297--1367
28
2.5
28
79
0
88
42
9
33
14
1.78
1821--1857
18
2.1
18
100
0
74
45
16
10
27
1.80
3747--3826
41
2.0
41
92
5
135
42
1
26
30
1.63
3671--3900
115
2.0
115
91
1
372
36
5
26
31
1.80
3988--4027
18
2.2
18
86
8
55
25
0
7
67
1.16
6237--6270
18
1.9
17
88
5
50
32
5
5
55
1.48
7891--7915
7
3.6
7
100
0
50
52
0
0
48
1.00
8103--8171
34
2.0
36
85
5
97
28
1
4
65
1.21
8394--8534
76
1.9
76
90
0
228
28
9
25
36
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9296--9362
30
2.2
31
86
2
91
53
1
10
34
1.44
20419--20452
18
1.9
17
88
5
50
41
0
2
55
1.15
21876--21981
23
4.5
23
85
2
131
46
21
19
12
1.83
21877--22002
46
2.7
47
82
6
148
45
21
21
11
1.84
21829--21978
69
2.1
68
82
11
171
45
18
22
14
1.85
21876--22002
23
5.4
23
83
5
112
45
21
21
11
1.83

Tables:   1

The End!