Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010199.1 Kokia drynarioides strain JFW-HI SEQ_125014, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18154

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1422--1476
23
2.4
23
93
3
94
7
29
21
41
1.80
2882--3005
31
4.1
30
78
12
128
33
3
24
38
1.71
4696--4769
37
2.0
37
94
0
130
28
20
14
36
1.92
4649--4816
85
2.0
85
88
2
248
25
23
14
37
1.92
4925--4995
37
1.9
37
88
0
106
32
18
12
36
1.88
5075--5214
48
2.9
48
86
1
174
24
24
15
36
1.93
7276--7375
36
2.8
36
84
0
137
32
19
27
22
1.97
8847--9120
124
2.2
123
88
0
413
23
19
17
39
1.92
9039--9204
84
2.0
85
87
3
246
24
22
15
37
1.93
8915--9322
207
2.0
209
85
2
563
24
20
15
39
1.91
9142--9477
170
2.0
171
86
1
478
25
19
14
40
1.90
9301--10873
208
7.6
208
85
1
1873
22
19
16
41
1.91
9021--9700
378
1.8
377
85
1
959
23
20
15
40
1.91
10040--10199
85
1.9
85
85
5
225
22
17
16
43
1.88
10446--10537
48
1.9
48
84
0
121
22
19
17
40
1.91
10459--10622
85
1.9
85
83
2
213
21
18
17
42
1.90
11232--11357
50
2.6
49
78
2
135
15
33
17
34
1.91
12298--12331
12
2.8
12
95
0
59
0
5
2
91
0.51
13176--13215
17
2.3
17
86
4
53
2
12
0
85
0.71
17526--17761
30
7.9
30
81
6
221
38
2
22
35
1.70
17526--17747
59
3.7
58
79
11
227
37
2
22
36
1.69

Tables:   1

The End!