Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010203.1 Kokia drynarioides strain JFW-HI SEQ_125020, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47198

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--733
86
8.5
89
91
5
1088
49
5
4
40
1.46
1--761
351
2.2
336
89
6
1143
49
5
4
41
1.46
862--909
12
3.7
12
77
20
51
41
10
0
47
1.37
872--906
17
2.1
16
89
5
52
48
8
0
42
1.33
862--919
28
2.1
28
83
0
71
43
12
0
44
1.41
4765--5143
61
6.3
61
73
11
239
34
17
20
28
1.95
4813--5266
118
3.8
119
82
4
463
34
16
20
28
1.95
4887--5313
118
3.6
115
81
9
459
36
16
19
26
1.94
4726--5237
60
8.5
61
71
8
234
35
17
18
29
1.94
5363--5490
48
2.6
52
75
18
141
37
14
14
33
1.87
9439--9490
27
1.9
27
96
0
95
51
1
23
23
1.58
12851--12974
10
13.4
9
70
14
58
62
0
4
33
1.14
12851--12901
25
2.0
27
84
7
70
62
0
5
31
1.19
12878--12977
28
3.6
28
71
17
75
61
0
4
35
1.15
13694--13742
24
2.0
24
100
0
98
51
4
28
16
1.63
14340--14390
26
2.0
26
96
0
93
21
27
7
43
1.80
15166--15378
106
2.0
106
100
0
426
30
23
7
38
1.82
17741--17777
16
2.3
16
95
0
65
78
2
10
8
1.06
18226--18261
18
1.9
18
88
5
54
27
0
8
63
1.23
40037--40091
24
2.3
24
90
0
83
25
18
7
49
1.73
40046--40100
24
2.4
23
85
8
69
23
16
7
52
1.68
41279--41354
39
1.9
39
97
0
143
34
14
25
26
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41278--41344
21
3.3
21
65
12
59
32
11
28
26
1.92

Tables:   1

The End!