Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010212.1 Kokia drynarioides strain JFW-HI SEQ_125032, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  107316

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--127
23
5.2
23
82
7
138
11
23
22
42
1.86
6--132
48
2.7
46
84
8
157
11
23
22
42
1.85
95--166
35
2.1
34
81
2
81
9
22
23
44
1.82
16452--16497
22
2.1
22
84
8
58
52
0
6
41
1.27
24075--24121
20
2.3
21
88
3
69
48
4
0
46
1.21
24086--24128
20
2.2
20
87
4
61
55
2
0
41
1.12
24144--24186
10
4.4
10
82
14
54
58
2
2
37
1.24
24146--24187
18
2.3
19
91
4
68
54
2
2
40
1.26
25332--25373
14
3.1
14
83
12
52
40
0
0
59
0.97
25328--25393
17
3.9
17
75
15
57
36
3
1
59
1.22
25769--25840
33
2.2
32
83
11
92
44
4
0
51
1.20
27845--27890
16
2.6
18
80
13
51
39
6
0
54
1.26
31619--31647
5
5.8
5
100
0
58
37
0
20
41
1.53
34071--34100
15
2.0
15
100
0
60
26
26
13
33
1.93
35943--35980
19
2.0
19
100
0
76
26
15
31
26
1.96
48266--48322
19
2.9
19
70
12
53
40
3
1
54
1.28
48515--48550
2
18.0
2
88
0
54
47
2
2
47
1.31
48909--48980
30
2.4
30
86
6
103
47
2
0
50
1.15
49286--49313
4
7.0
4
100
0
56
25
0
0
75
0.81
52875--52969
31
3.2
31
73
8
97
22
17
10
49
1.77
52875--53060
58
3.2
59
78
5
173
23
15
12
48
1.79
52875--53019
59
2.5
60
78
4
161
23
15
11
48
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59632--59689
29
2.0
29
100
0
116
24
10
27
37
1.88
67674--67706
16
2.0
17
88
5
50
24
6
12
57
1.57
69460--69550
42
2.2
42
100
0
182
15
23
6
54
1.64
72545--72572
10
2.8
10
100
0
56
0
10
0
89
0.49
74965--75030
31
2.0
33
85
8
91
33
6
0
60
1.21
78840--78866
2
13.5
2
100
0
54
0
0
48
51
1.00
78864--78889
4
6.5
4
100
0
52
23
0
26
50
1.50
99299--99568
77
3.5
77
93
1
443
21
19
15
43
1.88
105352--105445
30
3.1
30
77
6
109
30
22
3
43
1.69
105457--105607
30
5.1
29
75
10
137
35
20
4
39
1.73
106328--106393
31
2.2
31
97
2
125
46
18
6
28
1.72

Tables:   1

The End!