Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010269.1 Kokia drynarioides strain JFW-HI SEQ_125113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28556

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93--150
20
2.8
20
92
2
98
0
37
0
62
0.96
86--146
20
3.5
17
77
16
63
0
37
0
62
0.96
2191--2215
7
3.6
7
100
0
50
0
12
0
88
0.53
9477--9514
20
1.9
20
94
0
67
55
0
0
44
0.99
9465--9540
37
2.0
38
82
7
93
52
1
1
44
1.17
9474--9519
19
2.3
20
85
3
67
52
0
0
47
1.00
9618--9664
25
2.0
24
83
8
60
59
2
6
31
1.34
12534--12685
29
5.2
29
81
10
118
36
2
26
34
1.71
12555--12685
29
4.5
29
84
7
151
37
2
25
35
1.69
12526--12685
58
2.7
58
80
12
175
36
2
26
34
1.70
13694--13783
3
29.7
3
83
6
101
37
2
0
60
1.09
13782--13810
3
9.7
3
100
0
58
0
0
31
68
0.89
14518--14573
19
2.9
19
84
12
71
17
5
14
62
1.49
14609--14672
20
3.4
20
89
8
91
59
1
3
35
1.23
14609--14672
19
3.4
19
87
8
87
59
1
3
35
1.23
15085--15183
37
2.7
37
95
0
171
18
22
22
37
1.94
15136--15934
205
3.9
205
89
1
1181
21
22
20
35
1.96
27345--27375
15
2.1
15
93
0
53
22
19
22
35
1.96
27667--28022
29
12.2
29
84
7
427
37
3
26
32
1.75

Tables:   1

The End!